4.6 Article

Attention-Based Dynamic Subspace Learners for Medical Image Analysis

Journal

IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS
Volume 26, Issue 9, Pages 4599-4610

Publisher

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
DOI: 10.1109/JBHI.2022.3186882

Keywords

Measurement; Biomedical imaging; Visualization; Image segmentation; Image retrieval; Image analysis; Training; Clustering; deep metric learning; image retrieval; and weakly supervised segmentation

Funding

  1. Canada Research Chair on Shape Analysis in Medical Imaging
  2. Natural Sciences and Engineering Research Council of Canada (NSERC)
  3. Fonds de Recherche du Quebec (FQRNT)

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This paper proposes a dynamic subspace learner that can dynamically utilize multiple learners to improve similarity learning in medical image analysis. The integration of an attention module enhances the visual interpretability of the method. The method achieves competitive results and outperforms other methods in image clustering, retrieval, and segmentation applications.
Learning similarity is a key aspect in medical image analysis, particularly in recommendation systems or in uncovering the interpretation of anatomical data in images. Most existing methods learn such similarities in the embedding space over image sets using a single metric learner. Images, however, have a variety of object attributes such as color, shape, or artifacts. Encoding such attributes using a single metric learner is inadequate and may fail to generalize. Instead, multiple learners could focus on separate aspects of these attributes in subspaces of an overarching embedding. This, however, implies the number of learners to be found empirically for each new dataset. This work, Dynamic Subspace Learners, proposes to dynamically exploit multiple learners by removing the need of knowing apriori the number of learners and aggregating new subspace learners during training. Furthermore, the visual interpretability of such subspace learning is enforced by integrating an attention module into our method. This integrated attention mechanism provides a visual insight of discriminative image features that contribute to the clustering of image sets and a visual explanation of the embedding features. The benefits of our attention-based dynamic subspace learners are evaluated in the application of image clustering, image retrieval, and weakly supervised segmentation. Our method achieves competitive results with the performances of multiple learners baselines and significantly outperforms the classification network in terms of clustering and retrieval scores on three different public benchmark datasets. Moreover, our method also provides an attention map generated directly during inference to illustrate the visual interpretability of the embedding features. These attention maps offer a proxy-labels, which improves the segmentation accuracy up to 15% in Dice scores when compared to state-of-the-art interpretation techniques.

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