4.6 Article

Genome-wide association analysis identified consistent QTL for seed yield in a soybean diversity panel tested across multiple environments

Related references

Note: Only part of the references are listed.
Article Genetics & Heredity

Genotyping-by-sequencing and genomic selection applications in hexaploid triticale

Habtamu Ayalew et al.

Summary: Triticale, a hybrid species between wheat and rye, has a limited genomic resource due to its large and complex genome. This study used genotyping-by-sequencing to generate dense marker data and identified a large number of single nucleotide polymorphism markers. Genetic diversity and population structure analysis provided insights into the genetic background and population composition of triticale. Additionally, genomic selection models were used to estimate the accuracy of improving forage yield in triticale, showing the potential of genomic selection in triticale breeding.

G3-GENES GENOMES GENETICS (2022)

Article Plant Sciences

Mapping of partial resistance to Phytophthora sojae in soybean PIs using whole-genome sequencing reveals a major QTL

Maxime de Ronne et al.

Summary: A new P. sojae resistance QTL with a relatively major effect was identified in this study, spanning a region of about 500 kb on chromosome 15. Plants carrying the favorable allele at this QTL showed a 60% increase in resistance. This offers new opportunities for developing improved soybean cultivars with broad resistance to P. sojae through marker-assisted selection.

PLANT GENOME (2022)

Review Biochemistry & Molecular Biology

Pod shattering in grain legumes: emerging genetic and environment-related patterns

Travis A. Parker et al.

Summary: Reduction in pod shattering is crucial for grain legume domestication, but many domesticated legumes still suffer yield losses under arid conditions. Mutations related to pod shattering affect twisting force or structural strength, often controlled by a small number of key genes across different legume species. Understanding pod-shattering related functional information is essential for breeding crops suited to future arid conditions.

PLANT CELL (2021)

Article Multidisciplinary Sciences

Mapping proteome-wide targets of protein kinases in plant stress responses

Pengcheng Wang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)

Article Genetics & Heredity

Quantitative Genomic Dissection of Soybean Yield Components

Alencar Xavier et al.

G3-GENES GENOMES GENETICS (2020)

Review Biochemistry & Molecular Biology

Enhancing Genetic Gain through Genomic Selection: From Livestock to Plants

Yunbi Xu et al.

PLANT COMMUNICATIONS (2020)

Article Computer Science, Interdisciplinary Applications

lmerTest Package: Tests in Linear Mixed Effects Models

Alexandra Kuznetsova et al.

JOURNAL OF STATISTICAL SOFTWARE (2017)

Review Biochemistry & Molecular Biology

Abiotic Stress Signaling and Responses in Plants

Jian-Kang Zhu

Editorial Material Agronomy

Introduction to a Special Issue on Genotype by Environment Interaction

Natalia de Leon et al.

CROP SCIENCE (2016)

Article Multidisciplinary Sciences

Molecular basis of a shattering resistance boosting global dissemination of soybean

Hideyuki Funatsuki et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Multidisciplinary Sciences

Yield Trends Are Insufficient to Double Global Crop Production by 2050

Deepak K. Ray et al.

PLOS ONE (2013)

Article Biochemical Research Methods

GAPIT: genome association and prediction integrated tool

Alexander E. Lipka et al.

BIOINFORMATICS (2012)

Article Biochemical Research Methods

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

Thibaut Jombart et al.

BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

SoyBase, the USDA-ARS soybean genetics and genomics database

David Grant et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Agronomy

A Major Soybean QTL, qPDH1, Controls Pod Dehiscence without Marked Morphological Change

Masaya Suzuki et al.

PLANT PRODUCTION SCIENCE (2009)

Article Environmental Sciences

Methods and technologies to improve efficiency of water use

Robert G. Evans et al.

WATER RESOURCES RESEARCH (2008)

Article Biochemical Research Methods

TASSEL: software for association mapping of complex traits in diverse samples

Peter J. Bradbury et al.

BIOINFORMATICS (2007)