Related references
Note: Only part of the references are listed.Linking EMT programmes to normal and neoplastic epithelial stem cells
Arthur W. Lambert et al.
NATURE REVIEWS CANCER (2021)
STEM CELLS AND THE DIFFERENTIATION HIERARCHY IN MAMMARY GLAND DEVELOPMENT
Nai Yang Fu et al.
PHYSIOLOGICAL REVIEWS (2020)
Comprehensive characterization of claudin-low breast tumors reflects the impact of the cell-of-origin on cancer evolution
Roxane M. Pommier et al.
NATURE COMMUNICATIONS (2020)
Stem Cell Determinant SOX9 Promotes Lineage Plasticity and Progression in Basal-like Breast Cancer
John R. Christin et al.
CELL REPORTS (2020)
Visualization of human T lymphocyte-mediated eradication of cancer cells in vivo
Xingkang He et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
ARe we there yet? Understanding androgen receptor signaling in breast cancer
Anna R. Michmerhuizen et al.
NPJ BREAST CANCER (2020)
Intraclonal Plasticity in Mammary Tumors Revealed through Large-Scale Single-Cell Resolution 3D Imaging
Anne C. Rios et al.
CANCER CELL (2019)
SOX9 drives the epithelial-mesenchymal transition in non-small-cell lung cancer through the Wnt/-catenin pathway
Jing-Qiang Huang et al.
JOURNAL OF TRANSLATIONAL MEDICINE (2019)
g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)
Uku Raudvere et al.
NUCLEIC ACIDS RESEARCH (2019)
Genome-wide mapping of DNA-binding sites identifies stemness-related genes as directly repressed targets of SNAIL1 in colorectal cancer cells
Sven Beyes et al.
ONCOGENE (2019)
FOXA1 upregulation promotes enhancer and transcriptional reprogramming in endocrine-resistant breast cancer
Xiaoyong Fu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Genomewide binding of transcription factor Snail1 in triple-negative breast cancer cells
Varun Maturi et al.
MOLECULAR ONCOLOGY (2018)
Single-Cell Transcriptomes Distinguish Stem Cell State Changes and Lineage Specification Programs in Early Mammary Gland Development
Rajshekhar R. Giraddi et al.
CELL REPORTS (2018)
Immune Landscape of Breast Cancers
Divya Nagarajan et al.
BIOMEDICINES (2018)
Twist1 promotes breast cancer invasion and metastasis by silencing Foxa1 expression
Y. Xu et al.
ONCOGENE (2017)
SNAIL1-mediated downregulation of FOXA proteins facilitates the inactivation of transcriptional enhancer elements at key epithelial genes in colorectal cancer cells
Sabine Jaegle et al.
PLOS GENETICS (2017)
Intratumoral bidirectional transitions between epithelial and mesenchymal cells in triple-negative breast cancer
Mizuki Yamamoto et al.
CANCER SCIENCE (2017)
Immunohistochemical co-expression status of cytokeratin 5/6, androgen receptor, and p53 as prognostic factors of adjuvant chemotherapy for triple negative breast cancer
Tetsuyo Maeda et al.
MEDICAL MOLECULAR MORPHOLOGY (2016)
Epigenetic Switch between SOX2 and SOX9 Regulates Cancer Cell Plasticity
Sheng-Chieh Lin et al.
CANCER RESEARCH (2016)
FOXA1 overexpression mediates endocrine resistance by altering the ER transcriptome and IL-8 expression in ER-positive breast cancer
Xiaoyong Fu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Refinement of Triple-Negative Breast Cancer Molecular Subtypes: Implications for Neoadjuvant Chemotherapy Selection
Brian D. Lehmann et al.
PLOS ONE (2016)
Coexpression of androgen receptor and FOXA1 in nonmetastatic triple-negative breast cancer: ancillary study from PACS08 trial
Severine Guiu et al.
FUTURE ONCOLOGY (2015)
Pharmacogenomic agreement between two cancer cell line data sets
Nicolas Stransky et al.
NATURE (2015)
CRISPR/Cas9n-Mediated Deletion of the Snail 1Gene (SNAI1) Reveals Its Role in Regulating Cell Morphology, Cell-Cell Interactions, and Gene Expression in Ovarian Cancer (RMG-1) Cells
Misako Haraguchi et al.
PLOS ONE (2015)
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao et al.
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Differential Role of Snail1 and Snail2 Zinc Fingers in E-cadherin Repression and Epithelial to Mesenchymal Transition
Ana Villarejo et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
Cooperativity and equilibrium with FOXA1 define the androgen receptor transcriptional program
Hong-Jian Jin et al.
NATURE COMMUNICATIONS (2014)
Breast Cancer Stem Cells Transition between Epithelial and Mesenchymal States Reflective of their Normal Counterparts
Suling Liu et al.
STEM CELL REPORTS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Loss of FBP1 by Snail-Mediated Repression Provides Metabolic Advantages in Basal-like Breast Cancer
Chenfang Dong et al.
CANCER CELL (2013)
Cancer genetics and genomics of human FOX family genes
Masuko Katoh et al.
CANCER LETTERS (2013)
TGF-β An emerging player in drug resistance
Diede Brunen et al.
CELL CYCLE (2013)
The Cancer Genome Atlas Pan-Cancer analysis project
John N. Weinstein et al.
NATURE GENETICS (2013)
Snail1 controls TGF-β responsiveness and differentiation of mesenchymal stem cells
R. Batlle et al.
ONCOGENE (2013)
FOXA1 represses the molecular phenotype of basal breast cancer cells
G. M. Bernardo et al.
ONCOGENE (2013)
Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal
Jianjiong Gao et al.
SCIENCE SIGNALING (2013)
FOXA1: a transcription factor with parallel functions in development and cancer
Gina M. Bernardo et al.
BIOSCIENCE REPORTS (2012)
A Mammary Stem Cell Population Identified and Characterized in Late Embryogenesis Reveals Similarities to Human Breast Cancer
Benjamin T. Spike et al.
CELL STEM CELL (2012)
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
Jordi Barretina et al.
NATURE (2012)
The expression and clinical significance of the androgen receptor and E-cadherin in triple-negative breast cancer
Dabei Tang et al.
MEDICAL ONCOLOGY (2012)
c-Kit is required for growth and survival of the cells of origin of Brca1-mutation-associated breast cancer
J. L. Regan et al.
ONCOGENE (2012)
Defining the cellular precursors to human breast cancer
Patricia J. Keller et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Induction of epithelial-mesenchymal transition by transforming growth factor β
Aristidis Moustakas et al.
SEMINARS IN CANCER BIOLOGY (2012)
SAMStat: monitoring biases in next generation sequencing data
Timo Lassmann et al.
BIOINFORMATICS (2011)
Molecular signatures database (MSigDB) 3.0
Arthur Liberzon et al.
BIOINFORMATICS (2011)
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
Bo Li et al.
BMC BIOINFORMATICS (2011)
Androgen receptor driven transcription in molecular apocrine breast cancer is mediated by FoxA1
Jessica L. L. Robinson et al.
EMBO JOURNAL (2011)
Identification of human triple-negative breast cancer subtypes and preclinical models for selection of targeted therapies
Brian D. Lehmann et al.
JOURNAL OF CLINICAL INVESTIGATION (2011)
FOXA1 is a key determinant of estrogen receptor function and endocrine response
Antoni Hurtado et al.
NATURE GENETICS (2011)
The Transcription Factors Snail and Slug Activate the Transforming Growth Factor-Beta Signaling Pathway in Breast Cancer
Archana Dhasarathy et al.
PLOS ONE (2011)
An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients
Balazs Gyoerffy et al.
BREAST CANCER RESEARCH AND TREATMENT (2010)
BRCA1 Basal-like Breast Cancers Originate from Luminal Epithelial Progenitors and Not from Basal Stem Cells
Gemma Molyneux et al.
CELL STEM CELL (2010)
FOXA1 is an essential determinant of ERα expression and mammary ductal morphogenesis
Gina M. Bernardo et al.
DEVELOPMENT (2010)
Snail Family Regulation and Epithelial Mesenchymal Transitions in Breast Cancer Progression
Antonio Garcia de Herreros et al.
JOURNAL OF MAMMARY GLAND BIOLOGY AND NEOPLASIA (2010)
The Pathophysiology of Epithelial-Mesenchymal Transition Induced by Transforming Growth Factor-beta in Normal and Malignant Mammary Epithelial Cells
Molly A. Taylor et al.
JOURNAL OF MAMMARY GLAND BIOLOGY AND NEOPLASIA (2010)
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
Sven Heinz et al.
MOLECULAR CELL (2010)
Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
Daniele Merico et al.
PLOS ONE (2010)
Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes
Joseph H. Taube et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Characterization of a Naturally Occurring Breast Cancer Subset Enriched in Epithelial-to-Mesenchymal Transition and Stem Cell Characteristics
Bryan T. Hennessy et al.
CANCER RESEARCH (2009)
ELDA: Extreme limiting dilution analysis for comparing depleted and enriched populations in stem cell and other assays
Yifang Hu et al.
JOURNAL OF IMMUNOLOGICAL METHODS (2009)
A SNAIL1-SMAD3/4 transcriptional repressor complex promotes TGF-β mediated epithelial-mesenchymal transition
Theresa Vincent et al.
NATURE CELL BIOLOGY (2009)
Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers
Elgene Lim et al.
NATURE MEDICINE (2009)
Epithelial mesenchymal transition traits in human breast cancer cell lines
T. Blick et al.
CLINICAL & EXPERIMENTAL METASTASIS (2008)
SNAI1 is required for tumor growth and lymph node metastasis of human breast carcinoma MDA-MB-231 cells
David Olmeda et al.
CANCER RESEARCH (2007)
Snail silencing effectively suppresses tumour growth and invasiveness
D. Olmeda et al.
ONCOGENE (2007)
Molecular definition of breast tumor heterogeneity
Michail Shipitsin et al.
CANCER CELL (2007)
A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes
Richard M. Neve et al.
CANCER CELL (2006)
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
ROCR: visualizing classifier performance in R
T Sing et al.
BIOINFORMATICS (2005)
The transcription factor Snail downregulates the tight junction components independently of E-cadherin downregulation
T Ohkubo et al.
JOURNAL OF CELL SCIENCE (2004)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
The increasing complexity of the Snail gene superfamily in metazoan evolution
M Manzanares et al.
TRENDS IN GENETICS (2001)
Molecular portraits of human breast tumours
CM Perou et al.
NATURE (2000)
The transcription factor Snail controls epithelial-mesenchymal transitions by repressing E-cadherin expression
A Cano et al.
NATURE CELL BIOLOGY (2000)
The transcription factor Snail is a repressor of E-cadherin gene expression in epithelial tumour cells
E Batlle et al.
NATURE CELL BIOLOGY (2000)
Share Paper
