Related references
Note: Only part of the references are listed.RNA Polymerase II Promoter-Proximal Pausing and Release to Elongation Are Key Steps Regulating Herpes Simplex Virus 1 Transcription
Claire H. Birkenheuer et al.
JOURNAL OF VIROLOGY (2020)
Priming and realignment by the influenza a virus RdRp is dependent on the length of the host primers and the extent of base pairing to viral RNA
Corey De Vlugt et al.
VIROLOGY (2019)
Interplay between Influenza Virus and the Host RNA Polymerase II Transcriptional Machinery
Alexander P. Walker et al.
TRENDS IN MICROBIOLOGY (2019)
Initiation, Elongation, and Realignment during Influenza Virus mRNA Synthesis
Aartjan J. W. te Velthuis et al.
JOURNAL OF VIROLOGY (2018)
Cellular and molecular mechanisms of HIV-1 integration targeting
Alan N. Engelman et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2018)
Influenza Virus Mounts a Two-Pronged Attack on Host RNA Polymerase II Transcription
David L. V. Bauer et al.
CELL REPORTS (2018)
Influenza A Virus Cell Entry, Replication, Virion Assembly and Movement
Dan Dou et al.
FRONTIERS IN IMMUNOLOGY (2018)
Host Shutoff in Influenza A Virus: Many Means to an End
Rachel Emily Levene et al.
VIRUSES-BASEL (2018)
Structure of human TFIID and mechanism of TBP loading onto promoter DNA
Avinash B. Patel et al.
SCIENCE (2018)
Insight into Influenza: A Virus Cap-Snatching
Corey De Vlugt et al.
VIRUSES-BASEL (2018)
Identification of Regions in the Spt5 Subunit of DRB Sensitivity-inducing Factor (DSIF) That Are Involved in Promoter-proximal Pausing
Yijun Qiu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2017)
Influenza A virus cap-snatches host RNAs based on their abundance early after infection
Dorota Sikora et al.
VIROLOGY (2017)
Super elongation complex promotes early HIV transcription and its function is modulated by P-TEFb
Alona Kuzmina et al.
TRANSCRIPTION-AUSTIN (2017)
Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex
Philip J. Robinson et al.
CELL (2016)
Molecular mechanisms of HIV latency
Daniele C. Cary et al.
JOURNAL OF CLINICAL INVESTIGATION (2016)
The hepatitis delta virus: Replication and pathogenesis
Camille Sureau et al.
JOURNAL OF HEPATOLOGY (2016)
RNA-Free and Ribonucleoprotein-Associated Influenza Virus Polymerases Directly Bind the Serine-5-Phosphorylated Carboxyl-Terminal Domain of Host RNA Polymerase II
Monica Martinez-Alonso et al.
JOURNAL OF VIROLOGY (2016)
Multiple P-TEFbs cooperatively regulate the release of promoter-proximally paused RNA polymerase II
Xiaodong Lu et al.
NUCLEIC ACIDS RESEARCH (2016)
An Evolutionary Role for HIV Latency in Enhancing Viral Transmission
Igor M. Rouzine et al.
CELL (2015)
Structural basis of transcription initiation by RNA polymerase II
Sarah Sainsbury et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2015)
The Mediator complex: a central integrator of transcription
Benjamin L. Allen et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2015)
Sequencing the cap-snatching repertoire of H1N1 influenza provides insight into the mechanism of viral transcription initiation
David Koppstein et al.
NUCLEIC ACIDS RESEARCH (2015)
Double-stranded DNA translocase activity of transcription factor TFIIH and the mechanism of RNA polymerase II open complex formation
James Fishburn et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Phosphorylation of HEXIM1 at Tyr271 and Tyr274 Promotes Release of P-TEFb from the 7SK snRNP Complex and Enhances Proviral HIV Gene Expression
Uri R. Mbonye et al.
PROTEOMICS (2015)
Intasome architecture and chromatin density modulate retroviral integration into nucleosome
Mohamed Salah Benleulmi et al.
RETROVIROLOGY (2015)
Structure of influenza A polymerase bound to the viral RNA promoter
Alexander Pflug et al.
NATURE (2014)
Conserved features of an RNA promoter for RNA polymerase II determined from sequence heterogeneity of a hepatitis delta virus population
Yasnee Beeharry et al.
VIROLOGY (2014)
Deep sequencing reveals the eight facets of the influenza A/HongKong/1/1968 (H3N2) virus cap-snatching process
Dorota Sikora et al.
SCIENTIFIC REPORTS (2014)
Defining NELF-E RNA Binding in HIV-1 and Promoter-Proximal Pause Regions
John M. Pagano et al.
PLOS GENETICS (2014)
The Spt4-Spt5 complex: A multi-faceted regulator of transcription elongation
Grant A. Hartzog et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2013)
Transcription elongation factors DSIF and NELF: Promoter-proximal pausing and beyond
Yuki Yamaguchi et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2013)
Negative Elongation Factor (NELF) Coordinates RNA Polymerase II Pausing, Premature Termination, and Chromatin Remodeling to Regulate
Malini Natarajan et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
The RNA polymerase of influenza A virus: mechanisms of viral transcription and replication
E. Fodor
ACTA VIROLOGICA (2013)
The Structure of Native Influenza Virion Ribonucleoproteins
Rocio Arranz et al.
SCIENCE (2012)
T-Cell Receptor Signaling Enhances Transcriptional Elongation from Latent HIV Proviruses by Activating P-TEFb through an ERK-Dependent Pathway
Young Kyeung Kim et al.
JOURNAL OF MOLECULAR BIOLOGY (2011)
Structural Insights to How Mammalian Capping Enzyme Reads the CTD Code
Agnidipta Ghosh et al.
MOLECULAR CELL (2011)
Preferential use of RNA leader sequences during influenza A transcription initiation in vivo
Christina Geerts-Dimitriadou et al.
VIROLOGY (2011)
Base-pairing promotes leader selection to prime in vitro influenza genome transcription
Christina Geerts-Dimitriadou et al.
VIROLOGY (2011)
Pausing of RNA Polymerase II Disrupts DNA-Specified Nucleosome Organization to Enable Precise Gene Regulation
Daniel A. Gilchrist et al.
CELL (2010)
Crystal structure of an avian influenza polymerase PAN reveals an endonuclease active site
Puwei Yuan et al.
NATURE (2009)
The hepatitis delta virus RNA genome interacts with the human RNA polymerases I and III
Valerie S. Greco-Stewart et al.
VIROLOGY (2009)
Transcriptional interference antagonizes proviral gene expression to promote HIV latency
Tina Lenasi et al.
CELL HOST & MICROBE (2008)
NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly
Daniel A. Gilchrist et al.
GENES & DEVELOPMENT (2008)
Transient-mediated fate determination in a transcriptional circuit of HIV
Leor S. Weinberger et al.
NATURE GENETICS (2008)
The structural basis for cap binding by influenza virus polymerase subunit PB2
Delphine Guilligay et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
Formation of an RNA polymerase II preinitiation complex on an RNA promoter derived from the hepatitis delta virus RNA genome
Abrahem Abrahem et al.
NUCLEIC ACIDS RESEARCH (2008)
Transcription of hepatitis delta virus RNA by RNA polymerase II
Jinhong Chang et al.
JOURNAL OF VIROLOGY (2008)
Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4
Michiel Vermeulen et al.
CELL (2007)
TFIIB and the regulation of transcription by RNA polymerase II
Wensheng Deng et al.
CHROMOSOMA (2007)
TFIIA changes the conformation of the DNA in TBP/TATA complexes and increases their kinetic stability
Aaron R. Hieb et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Hepatitis delta antigen binds to the clamp of RNA polymerase II and affects transcriptional fidelity
Yuki Yamaguchi et al.
GENES TO CELLS (2007)
Negative elongation factor NELF represses human immunodeficiency virus transcription by pausing the RNA polymerase II complex
Zhiqiang Zhang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
NELF interacts with CBC and participates in 3′ end processing of replication-dependent histone rnRNAs
Takashi Narita et al.
MOLECULAR CELL (2007)
Herpes simplex virus immediate-early protein ICP22 triggers loss of serine 2-phosphorylated RNA polymerase II
Kathryn A. Fraser et al.
JOURNAL OF VIROLOGY (2007)
The human RNA polymerase II interacts with the terminal stem-loop regions of the hepatitis delta virus RNA genome
Valerie S. Greco-Stewart et al.
VIROLOGY (2007)
Recruitment of TFIIH to the HIV LTR is a rate-limiting step in the emergence of HIV from latency
Young Kyeung Kim et al.
EMBO JOURNAL (2006)
Amino acid residues in the N-terminal region of the PA subunit of influenza A virus RNA polymerase play a critical role in protein stability, endonuclease activity, cap binding, and virion RNA promoter binding
Koyu Hara et al.
JOURNAL OF VIROLOGY (2006)
Influenza virus inhibits RNA polymerase II elongation
Annie Y. Chan et al.
VIROLOGY (2006)
RNA-templated replication of hepatitis delta virus: Genomic and antigenomic RNAs associate with different nuclear bodies
Yi-Jia Li et al.
JOURNAL OF VIROLOGY (2006)
The general transcription machinery and general cofactors
Mary C. Thomas et al.
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2006)
Action of inhibitors on accumulation of processed hepatitis delta virus RNAs
JH Chang et al.
JOURNAL OF VIROLOGY (2006)
Basics of the virology of HIV-1 and its replication
S Sierra et al.
JOURNAL OF CLINICAL VIROLOGY (2005)
The bromodomain protein Brd4 is a positive regulatory component of P-TEFb and stimulates RNA polymerase II-dependent transcription
MK Jang et al.
MOLECULAR CELL (2005)
Recruitment of P-TEFb for stimulation of transcriptional elongation by the bromodomain protein brd4
ZY Yang et al.
MOLECULAR CELL (2005)
Recognition of mRNA cap structures by viral and cellular proteins
P Fechter et al.
JOURNAL OF GENERAL VIROLOGY (2005)
Association of the influenza a virus RNA-dependent RNA polymerase with cellular RNA polymerase II
OG Engelhardt et al.
JOURNAL OF VIROLOGY (2005)
Functional domains of the influenza A virus PB2 protein: identification of NP- and PB1-binding sites
E Poole et al.
VIROLOGY (2004)
Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element
K Fujinaga et al.
MOLECULAR AND CELLULAR BIOLOGY (2004)
Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II
SS Mandal et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Alternative processing of hepatitis delta virus antigenomic RNA transcripts
XC Nie et al.
JOURNAL OF VIROLOGY (2004)
Inhibition of P-TEFb (CDK9/Cyclin T) kinase and RNA polymerase II transcription by the coordinated actions of HEXIM1 and 7SK snRNA
JHN Yik et al.
MOLECULAR CELL (2003)
Two aromatic residues in the PB2 subunit of influenza A RNA polymerase are crucial for cap binding
P Fechter et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
NTP-driven translocation by human RNA polymerase II
YA Nedialkov et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Human transcription elongation factor NELF: Identification of novel subunits and reconstitution of the functionally active complex
T Narita et al.
MOLECULAR AND CELLULAR BIOLOGY (2003)
Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins
DL Lindstrom et al.
MOLECULAR AND CELLULAR BIOLOGY (2003)
HIV-1 integration in the human genome favors active genes and local hotspots
ARW Schröder et al.
CELL (2002)
Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA
Y Yamaguchi et al.
MOLECULAR AND CELLULAR BIOLOGY (2002)
Rolling circle replication of hepatitis delta virus RNA is carried out by two different cellular RNA polymerases
TB Macnaughton et al.
JOURNAL OF VIROLOGY (2002)
The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription
ZY Yang et al.
NATURE (2001)
7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes
VT Nguyen et al.
NATURE (2001)
Host RNA polymerase requirements for transcription of the human hepatitis delta virus genome
G Moraleda et al.
JOURNAL OF VIROLOGY (2001)
Stimulation of RNA polymerase II elongation by hepatitis delta antigen
Y Yamaguchi et al.
SCIENCE (2001)
DSIF and NELF interact with RNA polymerase II elongation complex and HIV-1 Tat stimulates P-TEFb-mediated phosphorylation of RNA polymerase II and DSIF during transcription elongation
YH Ping et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
The active sites of the influenza cap-dependent endonuclease are on different polymerase subunits
ML Li et al.
EMBO JOURNAL (2001)
The large delta antigen of hepatitis delta virus potently inhibits genomic but not antigenomic RNA synthesis: a mechanism enabling initiation of viral replication
LE Modahl et al.
JOURNAL OF VIROLOGY (2000)
RNA-dependent replication and transcription of hepatitis delta virus RNA involve distinct cellular RNA polymerases
LE Modahl et al.
MOLECULAR AND CELLULAR BIOLOGY (2000)
Structure and function of a human TAFII250 double bromodomain module
RH Jacobson et al.
SCIENCE (2000)
Specific HDV RNA-templated transcription by pol II in vitro
J Filipovska et al.
RNA (2000)
Share Paper
