Related references
Note: Only part of the references are listed.Transcriptome Analysis Reveals Olfactory System Expression Characteristics of Aquatic Snakes
Zhong-Liang Peng et al.
FRONTIERS IN GENETICS (2022)
Sichuan hot-spring snakes imperiled: reason, situation, and protection
Jin-Long Ren et al.
ZOOLOGICAL RESEARCH (2022)
Dsuite - Fast D-statistics and related admixture evidence from VCF files
Milan Malinsky et al.
MOLECULAR ECOLOGY RESOURCES (2021)
pixy: Unbiased estimation of nucleotide diversity and divergence in the presence of missing data
Katharine L. Korunes et al.
MOLECULAR ECOLOGY RESOURCES (2021)
Sulfation of glycosaminoglycans depends on the catalytic of lithium-inhibited BPNT2 in vitro
Brynna S. Eisele et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2021)
Twelve years of SAMtools and BCFtools
Petr Danecek et al.
GIGASCIENCE (2021)
Isolation and reconnection: Demographic history and multiple contact zones of the green odorous frog (Odorrana margaretae) around the Sichuan Basin
Guannan Wen et al.
MOLECULAR ECOLOGY (2021)
KOBAS-i: intelligent prioritization and exploratory visualization of biological functions for gene enrichment analysis
Dechao Bu et al.
NUCLEIC ACIDS RESEARCH (2021)
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
Tianzhi Wu et al.
INNOVATION (2021)
OptM: estimating the optimal number of migration edges on population trees using Treemix
Robert R. Fitak
BIOLOGY METHODS & PROTOCOLS (2021)
The structural variation landscape in 492 Atlantic salmon genomes
Alicia C. Bertolotti et al.
NATURE COMMUNICATIONS (2020)
Genetic Diversity, Inbreeding Level, and Genetic Load in Endangered Snub-Nosed Monkeys (Rhinopithecus)
Weimin Kuang et al.
FRONTIERS IN GENETICS (2020)
Whole-genome resequencing provides insights into the evolution and divergence of the native domestic yaks of the Qinghai-Tibet Plateau
Zhi-xin Chai et al.
BMC EVOLUTIONARY BIOLOGY (2020)
A Darwinian Laboratory of Multiple Contact Zones
Kerstin Johannesson et al.
TRENDS IN ECOLOGY & EVOLUTION (2020)
Structural variation during dog domestication: insights from gray wolf and dhole genomes
Guo-Dong Wang et al.
NATIONAL SCIENCE REVIEW (2019)
Review: Implications of vertebrate fossils for paleo-elevations of the Tibetan Plateau
Tao Deng et al.
GLOBAL AND PLANETARY CHANGE (2019)
Structural variants in 3000 rice genomes
Roven Rommel Fuentes et al.
GENOME RESEARCH (2019)
The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments
Jean-Simon Brouard et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2019)
Tibetan hot-spring snakes under threat
Song Huang et al.
SCIENCE (2019)
PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files
Chi Zhang et al.
BIOINFORMATICS (2019)
Historical Genomes Reveal the Genomic Consequences of Recent Population Decline in Eastern Gorillas
Tom van der Valk et al.
CURRENT BIOLOGY (2019)
Influence of environmental factors on the genetic variation of the aquatic macrophyte Ranunculus subrigidus on the Qinghai-Tibetan Plateau
Zhigang Wu et al.
BMC EVOLUTIONARY BIOLOGY (2019)
The population genetics of structural variants in grapevine domestication
Yongfeng Zhou et al.
NATURE PLANTS (2019)
Mutations in SELENBP1, encoding a novel human methanethiol oxidase, cause extraoral halitosis
Arjan Pol et al.
NATURE GENETICS (2018)
Genome analysis of Taraxacum kok-saghyz Rodin provides new insights into rubber biosynthesis
Tao Lin et al.
NATIONAL SCIENCE REVIEW (2018)
Minimap2: pairwise alignment for nucleotide sequences
Heng Li
BIOINFORMATICS (2018)
fastp: an ultra-fast all-in-one FASTQ preprocessor
Shifu Chen et al.
BIOINFORMATICS (2018)
Accurate detection of complex structural variations using single-molecule sequencing
Fritz J. Sedlazeck et al.
NATURE METHODS (2018)
Divergent and parallel routes of biochemical adaptation in high-altitude passerine birds from the Qinghai-Tibet Plateau
Xiaojia Zhu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Selection and environmental adaptation along a path to speciation in the Tibetan frog Nanorana parkeri
Guo-Dong Wang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Andrew Rambaut et al.
SYSTEMATIC BIOLOGY (2018)
Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes
Silong Sun et al.
NATURE GENETICS (2018)
Comparative genomic investigation of high-elevation adaptation in ectothermic snakes
Jia-Tang Li et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Population genomic analysis reveals that homoploid hybrid speciation can be a lengthy process
Dafu Ru et al.
MOLECULAR ECOLOGY (2018)
Gene flow, ancient polymorphism, and ecological adaptation shape the genomic landscape of divergence among Darwin's finches
Fan Han et al.
GENOME RESEARCH (2017)
Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast
Daniel C. Jeffares et al.
NATURE COMMUNICATIONS (2017)
The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole-genome sequencing
Shaohua Xu et al.
NATIONAL SCIENCE REVIEW (2017)
A sex-linked supergene controls sperm morphology and swimming speed in a songbird
Kang-Wook Kim et al.
NATURE ECOLOGY & EVOLUTION (2017)
Identification and functional analysis of a novel CaSR mutation in a family with familial hypocalciuric hypercalcemia
Eun Sook Kim et al.
JOURNAL OF BONE AND MINERAL METABOLISM (2016)
Paleodistribution modeling suggests glacial refugia in Scandinavia and out-of-Tibet range expansion of the Arctic fox
Marcelo Fuentes-Hurtado et al.
ECOLOGY AND EVOLUTION (2016)
Genome-wide patterns of copy number variation in the Chinese yak genome
Xiao Zhang et al.
BMC GENOMICS (2016)
Out-of-Tibet: the spatio-temporal evolution of Gentiana (Gentianaceae)
Adrien Favre et al.
JOURNAL OF BIOGEOGRAPHY (2016)
Phylogeography and population genetics of Schizothorax o'connori: strong subdivision in the Yarlung Tsangpo River inferred from mtDNA and microsatellite markers
Xiang-Zhao Guo et al.
SCIENTIFIC REPORTS (2016)
Novel activating mutation of human calcium-sensing receptor in a family with autosomal dominant hypocalcaemia
Natalia Baran et al.
MOLECULAR AND CELLULAR ENDOCRINOLOGY (2015)
Mountain gorilla genomes reveal the impact of long-term population decline and inbreeding
Yali Xue et al.
SCIENCE (2015)
LEA: An R package for landscape and ecological association studies
Eric Frichot et al.
METHODS IN ECOLOGY AND EVOLUTION (2015)
Phylogeography of Nanorana parkeri (Anura: Ranidae) and multiple refugia on the Tibetan Plateau revealed by mitochondrial and nuclear DNA
Jun Liu et al.
SCIENTIFIC REPORTS (2015)
Second-generation PLINK: rising to the challenge of larger and richer datasets
Christopher C. Chang et al.
GIGASCIENCE (2015)
Evaluating the Use of ABBA-BABA Statistics to Locate Introgressed Loci
Simon H. Martin et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Species diversification and phylogeographical patterns of birds in response to the uplift of the Qinghai-Tibet Plateau and Quaternary glaciations
Fumin Lei et al.
CURRENT ZOOLOGY (2014)
Effects of Pleistocene climatic fluctuations on the phylogeography, demography and population structure of a high-elevation snake species, Thermophis baileyi, on the Tibetan Plateau
Sylvia Hofmann et al.
JOURNAL OF BIOGEOGRAPHY (2014)
Calcium-sensing-related gene mutations in hypercalcaemic hypocalciuric patients as differential diagnosis from primary hyperparathyroidism: detection of two novel inactivating mutations in an Italian population
Piero Stratta et al.
NEPHROLOGY DIALYSIS TRANSPLANTATION (2014)
Geothermal activity helps life survive glacial cycles
Ceridwen I. Fraser et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Himalayan fossils of the oldest known pantherine establish ancient origin of big cats
Z. Jack Tseng et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2014)
Genome Sequencing Highlights the Dynamic Early History of Dogs
Adam H. Freedman et al.
PLOS GENETICS (2014)
Genome-scale analysis of demographic history and adaptive selection
Qi Wu et al.
PROTEIN & CELL (2014)
LUMPY: a probabilistic framework for structural variant discovery
Ryan M. Layer et al.
GENOME BIOLOGY (2014)
Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication
Yogesh Paudel et al.
BMC GENOMICS (2013)
Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages (Saxifraga section Porphyrion subsection Oppositifoliae)
Manuela Winkler et al.
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2013)
Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars
Mingzhou Li et al.
NATURE GENETICS (2013)
Effect of Pleistocene Climatic Oscillations on the Phylogeography and Demography of Red Knobby Newt (Tylototriton shanjing) from Southwestern China
Guohua Yu et al.
PLOS ONE (2013)
The tiger genome and comparative analysis with lion and snow leopard genomes
Yun Sung Cho et al.
NATURE COMMUNICATIONS (2013)
Draft genome sequence of the Tibetan antelope
Ri-Li Ge et al.
NATURE COMMUNICATIONS (2013)
Robust Demographic Inference from Genomic and SNP Data
Laurent Excoffier et al.
PLOS GENETICS (2013)
PHYLOGEOGRAPHY OF BUDDLEJA CRISPA (BUDDLEJACEAE) AND ITS CORRELATION WITH DRAINAGE SYSTEM EVOLUTION IN SOUTHWESTERN CHINA
Liang-Liang Yue et al.
AMERICAN JOURNAL OF BOTANY (2012)
DELLY: structural variant discovery by integrated paired-end and split-read analysis
Tobias Rausch et al.
BIOINFORMATICS (2012)
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
Pablo Cingolani et al.
FLY (2012)
CASR gene activating mutations in two families with autosomal dominant hypocalcemia
Vito Guarnieri et al.
MOLECULAR GENETICS AND METABOLISM (2012)
Population genetic structure and geographic differentiation in the hot spring snake Thermophis baileyi (Serpentes, Colubridae): Indications for glacial refuges in southern-central Tibet
Sylvia Hofmann
MOLECULAR PHYLOGENETICS AND EVOLUTION (2012)
The genomic basis of adaptive evolution in threespine sticklebacks
Felicity C. Jones et al.
NATURE (2012)
Phylogeography of the South China Field Mouse (Apodemus draco) on the Southeastern Tibetan Plateau Reveals High Genetic Diversity and Glacial Refugia
Zhenxin Fan et al.
PLOS ONE (2012)
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
Joseph K. Pickrell et al.
PLOS GENETICS (2012)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
Heng Li
BIOINFORMATICS (2011)
Genetic Variations in Tibetan Populations and High-Altitude Adaptation at the Himalayas
Yi Peng et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Phylogeography of the endemic Gymnocypris chilianensis (Cyprinidae): Sequential westward colonization followed by allopatric evolution in response to cyclical Pleistocene glaciations on the Tibetan Plateau
Kai Zhao et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2011)
Inference of human population history from individual whole-genome sequences
Heng Li et al.
NATURE (2011)
Bayesian inference of ancient human demography from individual genome sequences
Ilan Gronau et al.
NATURE GENETICS (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Genetic Evidence for High-Altitude Adaptation in Tibet
Tatum S. Simonson et al.
SCIENCE (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Fast model-based estimation of ancestry in unrelated individuals
David H. Alexander et al.
GENOME RESEARCH (2009)
Mapping and sequencing of structural variation from eight human genomes (Reprinted from Nature, vol 453, pg 56-64, 2008)
Jeffrey M. Kidd et al.
NATURE GENETICS (2009)
The origins and impact of primate segmental duplications
Tomas Marques-Bonet et al.
TRENDS IN GENETICS (2009)
Quaternary glaciation of the Himalayan-Tibetan orogen
Lewis A. Owen et al.
JOURNAL OF QUATERNARY SCIENCE (2008)
Ancestry and divergence of subtropical montane forest isolates:: molecular biogeography of the genus Abies (Pinaceae) in southern Mexico and Guatemala
Juan P. Jaramillo-Correa et al.
MOLECULAR ECOLOGY (2008)
Extensive population expansion of Pedicularis longiflora (Orobanchaceae) on the Qinghai-Tibetan Plateau and its correlation with the Quaternary climate change
Fu-Sheng Yang et al.
MOLECULAR ECOLOGY (2008)
Mapping and sequencing of structural variation from eight human genomes
Jeffrey M. Kidd et al.
NATURE (2008)
Quaternary glacial history of the central karakoram
Yeong Bae Seong et al.
QUATERNARY SCIENCE REVIEWS (2007)
PLINK: A tool set for whole-genome association and population-based linkage analyses
Shaun Purcell et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2007)
Two Dobzhansky-Muller genes interact to cause hybrid lethality in Drosophila
Nicholas J. Brideau et al.
SCIENCE (2006)
A preliminary study on timing of the oldest Pleistocene glaciation in Qinghai-Tibetan Plateau
Shangzhe Zhou et al.
QUATERNARY INTERNATIONAL (2006)
Ice-age endurance: DNA evidence of a white spruce refugium in Alaska
Lynn L. Anderson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Coalescent-based hypothesis testing supports multiple Pleistocene refugia in the Pacific Northwest for the Pacific giant salamander (Dicamptodon tenebrosus)
Craig A. Steele et al.
MOLECULAR ECOLOGY (2006)
Application of phylogenetic networks in evolutionary studies
DH Huson et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Neighbor-Net: An agglomerative method for the construction of phylogenetic networks
D Bryant et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
Variation in mitochondrial DNA reveals multiple distant glacial refugia in black spruce (Picea mariana), a transcontinental North American conifer
JP Jaramillo-Correa et al.
MOLECULAR ECOLOGY (2004)
Surviving the ice: Northern refugia and postglacial colonization
KC Rowe et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Evolution in the Arctic: a phylogeographic analysis of the circumarctic plant, Saxifraga oppositifolia (Purple saxifrage)
RJ Abbott et al.
NEW PHYTOLOGIST (2004)
Glacial refugia:: Hotspots but not melting pots of genetic diversity
RJ Petit et al.
SCIENCE (2003)
Differential cycles of range contraction and expansion in European high mountain plants during the Late Quaternary:: insights from Pritzelago alpina (L.) O. Kuntze (Brassicaceae)
M Kropf et al.
MOLECULAR ECOLOGY (2003)
Correlation between fitness and genetic diversity
DH Reed et al.
CONSERVATION BIOLOGY (2003)
History and evolution of the arctic flora: in the footsteps of Eric Hulten
RJ Abbott et al.
MOLECULAR ECOLOGY (2003)
The relationship between climate change and Quaternary glacial cycles on the Qinghai-Tibetan Plateau: review and speculation
BX Zheng et al.
QUATERNARY INTERNATIONAL (2002)
Phylogeography of the Vosges mountains populations of Gonioctena pallida (Coleoptera: Chrysomelidae):: a nested clade analysis of mitochondrial DNA haplotypes
P Mardulyn
MOLECULAR ECOLOGY (2001)
A high-resolution millennial record of the South Asian Monsoon from Himalayan ice cores
LG Thompson et al.
SCIENCE (2000)
Molecular analysis of plant migration and refugia in the Arctic
RJ Abbott et al.
SCIENCE (2000)
The genetic legacy of the Quaternary ice ages
G Hewitt
NATURE (2000)
A 56-kDa selenium-binding protein participates in intra-Golgi protein transport
A Porat et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Biodiversity hotspots for conservation priorities
N Myers et al.
NATURE (2000)
Share Paper
