4.8 Article

Chemoproteomic Identification of Blue-Light-Damaged Proteins

Related references

Note: Only part of the references are listed.
Article Chemistry, Multidisciplinary

Collateral Damage Occurs When Using Photosensitizer Probes to Detect or Modulate Nucleic Acid Modifications

Aaron M. Fleming et al.

Summary: The research found that 8-oxoguanine (dOG) is the most reactive in nucleosides, and the native nucleoside dG is higher or similar in reactivity to 5mdC or m(6)A; competition of oxidant in both single- and double-stranded DNA confirmed that dG is favorably oxidized.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2022)

Article Chemistry, Multidisciplinary

Intracellular photocatalytic-proximity labeling for profiling protein-protein interactions in microenvironments

Michihiko Tsushima et al.

Summary: Intracellular photocatalytic-proximity labeling (iPPL) is a method used to analyze protein-protein interactions in the microenvironment of living cells. Acriflavine was found to be an efficient cell-membrane-permeable photocatalyst for iPPL experiments. iPPL was applied to study the histone-associated protein H2B in cells, and it was found that proteins interacting directly with histones and RNA-binding proteins could be selectively labeled.

CHEMICAL COMMUNICATIONS (2022)

Article Chemistry, Multidisciplinary

Quantitative Site-Specific Chemoproteomic Profiling of Protein Lipoylation

Shuchang Lai et al.

Summary: Protein lipoylation is an important post-translational modification related to various human diseases. However, a comprehensive strategy for quantifying lipoylation sites is still lacking. In this study, we developed a novel approach to quantify lipoylation sites in complex biological samples and investigated their functional connection with the synthetic pathway. This research will contribute to the understanding of the molecular mechanisms underlying lipoylation-related diseases.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2022)

Article Chemistry, Multidisciplinary

Development of a Photoactivatable Proximity Labeling Method for the Identification of Nuclear Proteins

Tomonori Tamura et al.

CHEMISTRY LETTERS (2020)

Article Ophthalmology

Integrin: Basement membrane adhesion by corneal epithelial and endothelial cells

Tina B. McKay et al.

EXPERIMENTAL EYE RESEARCH (2020)

Article Chemistry, Physical

Singlet oxygen generation by porphyrins and metalloporphyrins revisited: A quantitative structure-property relationship (QSPR) study

Andrey A. Buglak et al.

JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY (2020)

Review Chemistry, Multidisciplinary

Singlet Molecular Oxygen Reactions with Nucleic Acids, Lipids, and Proteins

Paolo Di Mascio et al.

CHEMICAL REVIEWS (2019)

Review Cell Biology

Integrins as biomechanical sensors of the microenvironment

Jenny Z. Kechagia et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2019)

Article Geriatrics & Gerontology

Daily blue-light exposure shortens lifespan and causes brain neurodegeneration in Drosophila

Trevor R. Nash et al.

NPJ AGING AND MECHANISMS OF DISEASE (2019)

Review Chemistry, Multidisciplinary

Light-Controlled Mammalian Cells and Their Therapeutic Applications in Synthetic Biology

Maysam Mansouri et al.

ADVANCED SCIENCE (2019)

Review Biochemical Research Methods

Ultraviolet radiation oxidative stress affects eye health

Iliya V. Ivanov et al.

JOURNAL OF BIOPHOTONICS (2018)

Article Chemistry, Multidisciplinary

Chemoproteomic profiling and discovery of protein electrophiles in human cells

Megan L. Matthews et al.

NATURE CHEMISTRY (2017)

Review Cell Biology

Talin - the master of integrin adhesions

Benjamin Klapholz et al.

JOURNAL OF CELL SCIENCE (2017)

Article Biochemistry & Molecular Biology

Blue light induced reactive oxygen species from flavin mononucleotide and flavin adenine dinucleotide on lethality of HeLa cells

Ming-Yeh Yang et al.

JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY (2017)

Article Chemistry, Physical

Reaction of Aniline with Singlet Oxygen (O2 1Δg)

Jomana Al-Nu'airat et al.

JOURNAL OF PHYSICAL CHEMISTRY A (2017)

Article Multidisciplinary Sciences

Relating conformation to function in integrin α5β1

Yang Su et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Review Biochemistry & Molecular Biology

Chemical methods for the proteome-wide identification of posttranslationally modified proteins

Kelly N. Chuh et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2015)

Review Biochemistry & Molecular Biology

Chemical proteomics approaches to examine novel histone posttranslational modifications

Xin Li et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2015)

Review Biochemistry & Molecular Biology

Global profiling of protein lipidation using chemical proteomic technologies

Edward W. Tate et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2015)

Article Ophthalmology

Laminin-511 and-521 Enable Efficient In Vitro Expansion of Human Corneal Endothelial Cells

Naoki Okumura et al.

INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE (2015)

Article Chemistry, Multidisciplinary

Cleavable trifunctional biotin reagents for protein labelling, capture and release

Yinliang Yang et al.

CHEMICAL COMMUNICATIONS (2013)

Article Chemistry, Multidisciplinary

Alkyne-Tag Raman Imaging for Visualization of Mobile Small Molecules in Live Cells

Hiroyuki Yamakoshi et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)

Article Biochemical Research Methods

Bayesian localization microscopy reveals nanoscale podosome dynamics

Susan Cox et al.

NATURE METHODS (2012)

Article Biochemistry & Molecular Biology

Generation and suppression of singlet oxygen in hair by photosensitization of melanin

Orlando Chiarelli-Neto et al.

FREE RADICAL BIOLOGY AND MEDICINE (2011)

Article Chemistry, Multidisciplinary

Imaging of EdU, an Alkyne-Tagged Cell Proliferation Probe, by Raman Microscopy

Hiroyuki Yamakoshi et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)

Article Ophthalmology

Integrin β1 Is Necessary for the Maintenance of Corneal Structural Integrity

Sunil K. Parapuram et al.

INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE (2011)

Article Pathology

Evidence of Oxidative Stress in the Pathogenesis of Fuchs Endothelial Corneal Dystrophy

Ula V. Jurkunas et al.

AMERICAN JOURNAL OF PATHOLOGY (2010)

Review Cell Biology

The FERM domain: organizing the structure and function of FAK

Margaret C. Frame et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)

Article Developmental Biology

Conditional deletion of β1-integrin from the developing lens leads to loss of the lens epithelial phenotype

Vladimir N. Simirskii et al.

DEVELOPMENTAL BIOLOGY (2007)

Article Multidisciplinary Sciences

BIG1, a brefeldin A-inhibited guanine nucleotide-exchanae protein, is required for correct glycosylation and function of integrin β1

Xiaoyan Shen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemistry & Molecular Biology

Blue light induces mitochondrial DNA damage and free radical production in epithelial cells

BF Godley et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2005)