Related references
Note: Only part of the references are listed.Epigenetic modifications in muscle regeneration and progression of Duchenne muscular dystrophy
Anna Rugowska et al.
CLINICAL EPIGENETICS (2021)
Epigenetic Regulation of Cell-Fate Changes That Determine Adult Liver Regeneration After Injury
Luigi Aloia
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2021)
Determination of Binding Potential of HCV Protease Inhibitors Against to SARS-CoV-2 Papain-like Protease wtih Computational Docking
Zihni Onur Caliskaner
LETTERS IN DRUG DESIGN & DISCOVERY (2021)
Toward a Mechanistic Understanding of DNA Methylation Readout by Transcription Factors
Judith F. Kribelbauer et al.
JOURNAL OF MOLECULAR BIOLOGY (2020)
LARMD: integration of bioinformatic resources to profile ligand-driven protein dynamics with a case on the activation of estrogen receptor
Jing-Fang Yang et al.
BRIEFINGS IN BIOINFORMATICS (2020)
Complete Profiling of Methyl-CpG-Binding Domains for Combinations of Cytosine Modifications at CpG Dinucleotides Reveals Differential Read-out in Normal and Rett-Associated States
Benjamin C. Buchmuller et al.
SCIENTIFIC REPORTS (2020)
DNA looping by two 5-methylcytosine-binding proteins quantified using nanofluidic devices
Ming Liu et al.
EPIGENETICS & CHROMATIN (2020)
Scalable molecular dynamics on CPU and GPU architectures with NAMD
James C. Phillips et al.
JOURNAL OF CHEMICAL PHYSICS (2020)
MBD2 Correlates with a Poor Prognosis and Tumor Progression in Renal Cell Carcinoma
Liantao Li et al.
ONCOTARGETS AND THERAPY (2020)
The topology of chromatin-binding domains in the NuRD deacetylase complex
Christopher J. Millard et al.
NUCLEIC ACIDS RESEARCH (2020)
AIMMS suite: a web server dedicated for prediction of drug resistance on protein mutation
Feng-Xu Wu et al.
BRIEFINGS IN BIOINFORMATICS (2020)
DNA methylation markers in obesity, metabolic syndrome, and weight loss
Mirian Samblas et al.
EPIGENETICS (2019)
farPPI: a webserver for accurate prediction of protein-ligand binding structures for small-molecule PPI inhibitors by MM/PB(GB)SA methods
Zhe Wang et al.
BIOINFORMATICS (2019)
DNA methylation aging clocks: challenges and recommendations
Christopher G. Bell et al.
GENOME BIOLOGY (2019)
Structural basis for the ability of MBD domains to bind methyl-CG and TG sites in DNA
Ke Liu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2018)
Readers of DNA methylation, the MBD family as potential therapeutic targets
Gordon D. Ginder et al.
PHARMACOLOGY & THERAPEUTICS (2018)
DNA-Methylation: Master or Slave of Neural Fate Decisions?
Stefan H. Stricker et al.
FRONTIERS IN NEUROSCIENCE (2018)
Mammalian DNA methyltransferases: new discoveries and open questions
Humaira Gowher et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2018)
Novel inhibitors of the epigenetic reader protein MBD2
Hugh Giovinazzo et al.
CANCER RESEARCH (2018)
Binding Affinity via Docking: Fact and Fiction
Tatu Pantsar et al.
MOLECULES (2018)
Methyl-CpG-binding protein MBD2 plays a key role in maintenance and spread of DNA methylation at CpG islands and shores in cancer
C. Stirzaker et al.
ONCOGENE (2017)
CHARMM-GUI ligand reader and modeler for CHARMM force field generation of small molecules
Seonghoon Kim et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2017)
CpG and methylation-dependent DNA binding and dynamics of the methylcytosine binding domain 2 protein at the single-molecule level
Hai Pan et al.
NUCLEIC ACIDS RESEARCH (2017)
Structures of Human A1 and A2A Adenosine Receptors with Xanthines Reveal Determinants of Selectivity
Robert K. Y. Cheng et al.
STRUCTURE (2017)
Transcription factors as readers and effectors of DNA methylation
Heng Zhu et al.
NATURE REVIEWS GENETICS (2016)
Tagging methyl-CpG-binding domain proteins reveals different spatiotemporal expression and supports distinct functions
Kathleen H. Wood et al.
EPIGENOMICS (2016)
Emerging Molecular and Biological Functions of MBD2, a Reader of DNA Methylation
Kathleen H. Wood et al.
FRONTIERS IN GENETICS (2016)
Understanding the challenges of protein flexibility in drug design
Dinler A. Antunes et al.
EXPERT OPINION ON DRUG DISCOVERY (2015)
ZINC 15-Ligand Discovery for Everyone
Teague Sterling et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2015)
PLIP: fully automated protein-ligand interaction profiler
Sebastian Salentin et al.
NUCLEIC ACIDS RESEARCH (2015)
Methyl-CpG-binding domain proteins: readers of the epigenome
Qian Du et al.
EPIGENOMICS (2015)
Alternative Splicing of MBD2 Supports Self-Renewal in Human Pluripotent Stem Cells
Yu Lu et al.
CELL STEM CELL (2014)
Probing the Dynamic Distribution of Bound States for Methylcytosine-binding Domains on DNA
Jason M. Cramer et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
MBD2 and MBD3: elusive functions and mechanisms
Roberta Menafra et al.
FRONTIERS IN GENETICS (2014)
Time-Resolved Fluorescence Resonance Energy Transfer Assay for Discovery of Small-Molecule Inhibitors of Methyl-CpG Binding Domain Protein 2
Nicolas Wyhs et al.
JOURNAL OF BIOMOLECULAR SCREENING (2014)
Methylation-Dependent and -Independent Genomic Targeting Principles of the MBD Protein Family
Tuncay Baubec et al.
CELL (2013)
DNA Methylation and Its Basic Function
Lisa D. Moore et al.
NEUROPSYCHOPHARMACOLOGY (2013)
Native contacts determine protein folding mechanisms in atomistic simulations
Robert B. Best et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Overexpression of MBD2 in Glioblastoma Maintains Epigenetic Silencing and Inhibits the Antiangiogenic Function of the Tumor Suppressor Gene BAI1
Dan Zhu et al.
CANCER RESEARCH (2011)
Methyl-Binding Domain Protein 2-Dependent Proliferation and Survival of Breast Cancer Cells
Omar Y. Mian et al.
MOLECULAR CANCER RESEARCH (2011)
Open Babel: An open chemical toolbox
Noel M. O'Boyle et al.
JOURNAL OF CHEMINFORMATICS (2011)
Adenosine receptor inhibition with theophylline attenuates the skin blood flow response to local heating in humans
Sarah M. Fieger et al.
EXPERIMENTAL PHYSIOLOGY (2010)
AutoDock4 and AutoDockTools4: Automated Docking with Selective Receptor Flexibility
Garrett M. Morris et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2009)
Linking DNA methylation and histone modification: patterns and paradigms
Howard Cedar et al.
NATURE REVIEWS GENETICS (2009)
Q-Dock: Low-resolution flexible ligand docking with pocket-specific threading restraints
Michal Brylinski et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2008)
Interaction of the DNA bases and their mononucleotides with pyridine-2-carbaldehyde thiosemicarbazonecopper(II) complexes.: Structure of the cytosine derivative
Begona Garcia et al.
JOURNAL OF INORGANIC BIOCHEMISTRY (2008)
New acyclic quinoxaline nucleosides. Synthesis and anti-HIV activity
Ibrahim A. I. Ali et al.
NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS (2008)
MBD2-Mediated Transcriptional Repression of the p14(ARF) Tumor Suppressor Gene in Human Colon Cancer Cells
Valerie Martin et al.
PATHOBIOLOGY (2008)
Multiple modes of interaction between the methylated DNA binding protein MeCP2 and chromatin
Tatiana Nikitina et al.
MOLECULAR AND CELLULAR BIOLOGY (2007)
MBD3L2 interacts with MBD3 and components of the NuRD complex and can oppose MBD2-MeCP1-mediated methylation silencing
SG Jin et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
A modified TIP3P water potential for simulation with Ewald summation
DJ Price et al.
JOURNAL OF CHEMICAL PHYSICS (2004)
The affinity of different MBD proteins for a specific methylated locus depends on their intrinsic binding properties
MF Fraga et al.
NUCLEIC ACIDS RESEARCH (2003)
Characteristics of ATP-induced current through P2X7 receptor in NG108-15 cells:: Unique antagonist sensitivity and lack of pore formation
T Watano et al.
JAPANESE JOURNAL OF PHARMACOLOGY (2002)
Imidazo[1,2-a]quinoxalines:: synthesis and cyclic nucleotide phosphodiesterase inhibitory activity
S Parra et al.
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY (2001)
Effects of Rett syndrome mutations of the methyl-CpG binding domain of the transcriptional repressor MeCP2 on selectivity for association with methylated DNA
E Ballestar et al.
BIOCHEMISTRY (2000)
The role of adenosine receptors in the action of theophylline on human peripheral blood mononuclear cells from healthy and asthmatic subjects
LJ Landells et al.
BRITISH JOURNAL OF PHARMACOLOGY (2000)
Share Paper
