4.7 Article

The NAC transcription factor ONAC083 negatively regulates rice immunity against Magnaporthe oryzae by directly activating transcription of the RING-H2 gene OsRFPH2-6

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

The OsNAC23-Tre6P-SnRK1a feed-forward loop regulates sugar homeostasis and grain yield in rice

Zhiyong Li et al.

Summary: The translation explains that Tre6P maintains sugar balance in plants and promotes growth by regulating carbon allocation. The sugar-inducible rice NAC transcription factor OsNAC23 elevates Tre6P levels and represses trehalose levels by directly repressing the transcription of the Tre6P phosphatase gene TPP1. Additionally, OsNAC23 and Tre6P suppress the activity and transcription of SnRK1a, preventing SnRK1a-mediated degradation of OsNAC23. Overexpression of OsNAC23 increases rice yield and photosynthetic rate.

MOLECULAR PLANT (2022)

Article Biochemistry & Molecular Biology

An evolutionarily conserved C4HC3-type E3 ligase regulates plant broad-spectrum resistance against pathogens

Shuai Fu et al.

Summary: This study identifies a microtubule-associated E3 ligase (MEL) that promotes the degradation of a serine hydroxymethyltrasferase (SHMT1), resulting in broad-spectrum resistance to pathogens. The findings suggest the potential utility of the MEL-SHMT1 module in generating broad-spectrum resistant rice to global destructive pathogens.

PLANT CELL (2022)

Review Plant Sciences

Plant immune networks

Bruno Pok Man Ngou et al.

Summary: Plants have cell-surface and intracellular receptors to recognize pathogen effectors. These receptors, along with their coreceptors, form networks to mediate downstream immune responses. The cell-surface and intracellular immune systems are interdependent and function synergistically to provide robust resistance against pathogens.

TRENDS IN PLANT SCIENCE (2022)

Article Multidisciplinary Sciences

An MKP-MAPK protein phosphorylation cascade controls vascular immunity in plants

Hui Lin et al.

Summary: This study identifies a vascular defense mechanism in plants against bacterial pathogens and reveals a tissue-specific defense regulatory network.

SCIENCE ADVANCES (2022)

Review Biochemistry & Molecular Biology

NAC Transcription Factors as Positive or Negative Regulators during Ongoing Battle between Pathogens and Our Food Crops

Zhiyuan Bian et al.

Summary: NAC transcription factor family plays important roles in plant growth, development, and stress responses, linking signaling pathways between plant hormones and participating in crop-pathogen interactions. Understanding their structure and function is crucial for further research on the roles of these key signaling molecules.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)

Article Plant Sciences

Maize transcription factor ZmBES1/BZR1-5 positively regulates kernel size

Fuai Sun et al.

Summary: The study reveals that ZmBES1/BZR1-5 positively regulates kernel size in maize by interacting with specific genes and binding to their promoters. Multiple experiments provide insights into the molecular mechanisms of kernel development in maize.

JOURNAL OF EXPERIMENTAL BOTANY (2021)

Article Plant Sciences

VviNAC33 promotes organ de-greening and represses vegetative growth during the vegetative-to-mature phase transition in grapevine

Erica D'Inca et al.

Summary: The research results indicate that VviNAC33 plays a crucial role in regulating the transition from vegetative to mature phase in grapes, terminating photosynthetic activity by inducing leaf de-greening and inhibiting organ growth, and directly regulating the expression of multiple genes.

NEW PHYTOLOGIST (2021)

Article Plant Sciences

A Pathogen-Inducible Rice NAC Transcription Factor ONAC096 Contributes to Immunity Against Magnaprothe oryzae and Xanthomonas oryzae pv. oryzae by Direct Binding to the Promoters of OsRap2.6, OsWRKY62, and OsPAL1

Hui Wang et al.

Summary: ONAC096, an inducible NAC transcription factor, contributes positively to rice immunity against Magnaprothe oryzae and Xanthomonas oryzae pv. oryzae by directly binding to the promoters of downstream target genes, enhancing the immune response and resistance to these pathogens.

FRONTIERS IN PLANT SCIENCE (2021)

Article Plant Sciences

Transcriptome analysis of rice response to blast fungus identified core genes involved in immunity

Dewei Yang et al.

Summary: The study highlights the importance of rapid, high-amplitude transcriptional reprogramming in rice defense against blast fungus, with ribosome- and protein translation-related genes being significantly enriched among differentially expressed genes at 12 hpi in both susceptible and resistant cultivars. A core set of genes involved in response to both biotic and abiotic stress was identified, including metallothionein genes positively regulating rice resistance and a peroxidase gene negatively regulating it. This study provides novel insights into transcriptional reprogramming and serves as a valuable resource for functional studies on rice immune signaling components in resistance to blast disease.

PLANT CELL AND ENVIRONMENT (2021)

Review Plant Sciences

WRKY transcription factors and plant defense responses: latest discoveries and future prospects

Shabir H. Wani et al.

Summary: WRKY transcription factors are essential regulators in plants, playing critical roles in response to biotic and abiotic stresses. They modulate various biological processes in plants by regulating signal transduction pathways, response to internal signals, developmental coordination, and adaptation to stress environments. Through interactions with other transcription factors, WRKY TFs form part of signaling webs that regulate diverse processes and plant immune response.

PLANT CELL REPORTS (2021)

Review Plant Sciences

PTI-ETI crosstalk: an integrative view of plant immunity

Minhang Yuan et al.

Summary: Plants have innate immune responses to resist pathogen attacks, involving pattern-recognition receptors (PRRs) and nucleotide-binding domain leucine-rich repeat containing receptors (NLRs) that lead to pattern-triggered immunity (PTI) and effector-triggered immunity (ETI). Despite different activation mechanisms, PTI and ETI converge into similar downstream responses, with evidence of interactions and shared components between PRR-mediated and NLR-mediated signaling cascades. Future research on signal collaboration between PRR-initiated and NLR-initiated immunity will provide a more comprehensive understanding of the plant immune system.

CURRENT OPINION IN PLANT BIOLOGY (2021)

Article Plant Sciences

ONAC066, A Stress-Responsive NAC Transcription Activator, Positively Contributes to Rice Immunity Against Magnaprothe oryzae Through Modulating Expression of OsWRKY62 and Three Cytochrome P450 Genes

Xi Yuan et al.

Summary: ONAC066, a transcription factor in rice, enhances rice immunity by modulating the expression of OsWRKY62 and a group of cytochrome P450 genes.

FRONTIERS IN PLANT SCIENCE (2021)

Article Biotechnology & Applied Microbiology

OsNAC2 integrates auxin and cytokinin pathways to modulate rice root development

Chanjuan Mao et al.

PLANT BIOTECHNOLOGY JOURNAL (2020)

Article Plant Sciences

ZmIBH1-1 regulates plant architecture in maize

Yingying Cao et al.

JOURNAL OF EXPERIMENTAL BOTANY (2020)

Review Biochemistry & Molecular Biology

Plant Immunity: Danger Perception and Signaling

Jian-Min Zhou et al.

Review Biochemistry & Molecular Biology

Plant Immune Mechanisms: From Reductionistic to Holistic Points of View

Jie Zhang et al.

MOLECULAR PLANT (2020)

Review Biochemistry & Molecular Biology

Crosstalk between Ubiquitination and Other Post-translational Protein Modifications in Plant Immunity

Yi Zhang et al.

PLANT COMMUNICATIONS (2020)

Review Biochemistry & Molecular Biology

Thioredoxin-mediated redox signalling in plant immunity

Capilla Mata-Perez et al.

PLANT SCIENCE (2019)

Article Biochemistry & Molecular Biology

Big Grain3, encoding a purine permease, regulates grain size via modulating cytokinin transport in rice

Yunhua Xiao et al.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2019)

Article Multidisciplinary Sciences

NAC-type transcription factors regulate accumulation of starch and protein in maize seeds

Zhiyong Zhang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Review Plant Sciences

NAC transcription factors in plant immunity

Xi Yuan et al.

PHYTOPATHOLOGY RESEARCH (2019)

Review Plant Sciences

The ubiquitin-proteasome system as a transcriptional regulator of plant immunity

Eleanor H. G. Adams et al.

JOURNAL OF EXPERIMENTAL BOTANY (2018)

Review Plant Sciences

Plant Immunity: From Signaling to Epigenetic Control of Defense

Juan S. Ramirez-Prado et al.

TRENDS IN PLANT SCIENCE (2018)

Article Multidisciplinary Sciences

A single transcription factor promotes both yield and immunity in rice

Jing Wang et al.

SCIENCE (2018)

Article Biochemical Research Methods

Mapping genome-wide transcription-factor binding sites using DAP-seq

Anna Bartlett et al.

NATURE PROTOCOLS (2017)

Review Plant Sciences

Ethylene response factors in Arabidopsis immunity

Pin-Yao Huang et al.

JOURNAL OF EXPERIMENTAL BOTANY (2016)

Article Biochemistry & Molecular Biology

Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape

Ronan C. O'Malley et al.

Review Microbiology

Transcriptional Regulation of Pattern-Triggered Immunity in Plants

Bo Li et al.

CELL HOST & MICROBE (2016)

Review Microbiology

Investigating the cell biology of plant infection by the rice blast fungus Magnaporthe oryzae

Xia Yan et al.

CURRENT OPINION IN MICROBIOLOGY (2016)

Editorial Material Biochemistry & Molecular Biology

A Layered Defense Strategy Mediated by Rice E3 Ubiquitin Ligases against Diverse Pathogens

Yuese Ning et al.

MOLECULAR PLANT (2016)

Article Biochemistry & Molecular Biology

The Transcription Factor OsWRKY45 Negatively Modulates the Resistance of Rice to the Brown Planthopper Nilaparvata lugens

Jiayi Huangfu et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2016)

Article Biochemistry & Molecular Biology

Comprehensive Analysis Suggests Overlapping Expression of Rice ONAC Transcription Factors in Abiotic and Biotic Stress Responses

Lijun Sun et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2015)

Review Plant Sciences

Transcriptional networks in plant immunity

Kenichi Tsuda et al.

NEW PHYTOLOGIST (2015)

Article Plant Sciences

NAC transcription factors in plant multiple abiotic stress responses: progress and prospects

Hongbo Shao et al.

FRONTIERS IN PLANT SCIENCE (2015)

Review Plant Sciences

Novel Insights into Rice Innate Immunity Against Bacterial and Fungal Pathogens

Wende Liu et al.

ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 52 (2014)

Review Plant Sciences

Transcriptional control of plant defence responses

Pierre Buscaill et al.

CURRENT OPINION IN PLANT BIOLOGY (2014)

Article Biochemistry & Molecular Biology

OsNAC111, a Blast Disease-Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes

Naoki Yokotani et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2014)

Review Plant Sciences

Early signaling network in rice PRR-mediated and R-mediated immunity

Yoji Kawano et al.

CURRENT OPINION IN PLANT BIOLOGY (2013)

Review Biochemistry & Molecular Biology

Plant E3 Ligases: Flexible Enzymes in a Sessile World

Liyuan Chen et al.

MOLECULAR PLANT (2013)

Review Biochemistry & Molecular Biology

Roles of Plant Hormones and Their Interplay in Rice Immunity

Dong-Lei Yang et al.

MOLECULAR PLANT (2013)

Article Biochemistry & Molecular Biology

Functions of rice NAC transcriptional factors, ONAC122 and ONAC131, in defense responses against Magnaporthe grisea

Lijun Sun et al.

PLANT MOLECULAR BIOLOGY (2013)

Review Multidisciplinary Sciences

Pivoting the Plant Immune System from Dissection to Deployment

Jeffery L. Dangl et al.

SCIENCE (2013)

Review Plant Sciences

Hormone defense networking in rice: tales from a different world

David De Vleesschauwer et al.

TRENDS IN PLANT SCIENCE (2013)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Plant Sciences

Involvement of OsJAZ8 in Jasmonate-Induced Resistance to Bacterial Blight in Rice

Shoko Yamada et al.

PLANT AND CELL PHYSIOLOGY (2012)

Review Plant Sciences

NAC proteins: regulation and role in stress tolerance

Swati Puranik et al.

TRENDS IN PLANT SCIENCE (2012)

Article Statistics & Probability

MEASURING REPRODUCIBILITY OF HIGH-THROUGHPUT EXPERIMENTS

Qunhua Li et al.

ANNALS OF APPLIED STATISTICS (2011)

Article Biochemical Research Methods

MEME-ChIP: motif analysis of large DNA datasets

Philip Machanick et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan et al.

BIOINFORMATICS (2010)

Article Genetics & Heredity

Genome-wide analysis of NAC transcription factor family in rice

Mohammed Nuruzzaman et al.

Article Biochemistry & Molecular Biology

The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice

Hironori Takasaki et al.

MOLECULAR GENETICS AND GENOMICS (2010)

Article Plant Sciences

The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling

Motoyasu Yoshii et al.

PLANT JOURNAL (2010)

Article Biochemistry & Molecular Biology

A gene family encoding RING finger proteins in rice: their expansion, expression diversity, and co-expressed genes

Sung Don Lim et al.

PLANT MOLECULAR BIOLOGY (2010)

Article Biotechnology & Applied Microbiology

Gene ontology analysis for RNA-seq: accounting for selection bias

Matthew D. Young et al.

GENOME BIOLOGY (2010)

Article Biochemistry & Molecular Biology

The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death

Takashi Kaneda et al.

EMBO JOURNAL (2009)

Article Biochemistry & Molecular Biology

Sequence and expression analysis of the thioredoxin protein gene family in rice

Mohammed Nuruzzaman et al.

MOLECULAR GENETICS AND GENOMICS (2008)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Rice XA21 binding protein 3 is a ubiquitin ligase required for full Xa21-mediated disease resistance

Yong-Sheng Wang et al.

PLANT CELL (2006)

Review Multidisciplinary Sciences

The plant immune system

Jonathan D. G. Jones et al.

NATURE (2006)

Article Multidisciplinary Sciences

Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice

Honghong Hu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Review Plant Sciences

NAC transcription factors: structurally distinct, functionally diverse

AN Olsen et al.

TRENDS IN PLANT SCIENCE (2005)

Article Plant Sciences

Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis

SL Stone et al.

PLANT PHYSIOLOGY (2005)