Related references
Note: Only part of the references are listed.Insight into the symbiotic lifestyle of DPANN archaea revealed by cultivation and genome analyses
Hiroyuki D. Sakai et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2022)
Genomic Insights Into the Archaea Inhabiting an Australian Radioactive Legacy Site
Xabier Vazquez-Campos et al.
FRONTIERS IN MICROBIOLOGY (2021)
Emendation of Rules 5b, 8, 15 and 22 of the International Code of Nomenclature of Prokaryotes to include the rank of phylum
Aharon Oren et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2021)
Evolution of the cytochrome bd oxygen reductase superfamily and the function of CydAA' in Archaea
Ranjani Murali et al.
ISME JOURNAL (2021)
GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database
Pierre-Alain Chaumeil et al.
BIOINFORMATICS (2020)
CRISPRCasdb a successor of CRISPRdb containing CRISPR arrays and cas genes from complete genome sequences, and tools to download and query lists of repeats and spacers
Christine Pourcel et al.
NUCLEIC ACIDS RESEARCH (2020)
Sulfuracidifex tepidarius gen. nov., sp. nov. and transfer of Sulfolobus metallicus Huber and Stetter 1992 to the genus Sulfuracidifex as Sulfuracidifex metallicus comb. nov.
Takashi Itoh et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2020)
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
Bui Quang Minh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Symbiosis between nanohaloarchaeon and haloarchaeon is based on utilization of different polysaccharides
Violetta La Cono et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Complete Genome Sequence of Athalassotoga saccharophila Strain NAS-01, a Deep-Branching Thermophilic Lineage in the Phylum Thermotogae
Shingo Kato et al.
MICROBIOLOGY RESOURCE ANNOUNCEMENTS (2020)
International Code of Nomenclature of Prokaryotes Prokaryotic Code (2008 Revision)
Charles T. Parker et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2019)
A new symbiotic nanoarchaeote (Candidatus Nanoclepta minutus) and its host (Zestosphaera tikiterensis gen. nov., sp. nov.) from a New Zealand hot spring
Emily St John et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2019)
Unexpected host dependency of Antarctic Nanohaloarchaeota
Joshua N. Hamm et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Metabolic Potential of As-yet-uncultured Archaeal Lineages of Candidatus Hydrothermarchaeota Thriving in Deep-sea Metal Sulfide Deposits
Shingo Kato et al.
MICROBES AND ENVIRONMENTS (2019)
Genomic diversity, lifestyles and evolutionary origins of DPANN archaea
Nina Dombrowski et al.
FEMS MICROBIOLOGY LETTERS (2019)
The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database
Neil D. Rawlings et al.
NUCLEIC ACIDS RESEARCH (2018)
Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'
William B. Whitman et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2018)
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
Han Zhang et al.
NUCLEIC ACIDS RESEARCH (2018)
The Archaellum: An Update on the Unique Archaeal Motility Structure
Sonja-Verena Albers et al.
TRENDS IN MICROBIOLOGY (2018)
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
Donovan H. Parks et al.
NATURE BIOTECHNOLOGY (2018)
Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations
Cindy J. Castelle et al.
NATURE REVIEWS MICROBIOLOGY (2018)
Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis
Jessica K. Jarett et al.
MICROBIOME (2018)
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
Yasuhiro Tanizawa et al.
BIOINFORMATICS (2018)
'ARMAN' archaea depend on association with euryarchaeal host in culture and in situ
Olga V. Golyshina et al.
NATURE COMMUNICATIONS (2017)
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
Ryan R. Wick et al.
PLOS COMPUTATIONAL BIOLOGY (2017)
A Complex Endomembrane System in the Archaeon Ignicoccus hospitalis Tapped by Nanoarchaeum equitans
Thomas Heimerl et al.
FRONTIERS IN MICROBIOLOGY (2017)
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
Jaime Huerta-Cepas et al.
NUCLEIC ACIDS RESEARCH (2016)
Athalassotoga saccharophila gen. nov., sp nov., isolated from an acidic terrestrial hot spring, and proposal of Mesoaciditogales ord. nov and Mesoaciditogaceae fam. nov in the phylum Thermotogae
Takashi Itoh et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences
Minoru Kanehisa et al.
JOURNAL OF MOLECULAR BIOLOGY (2016)
Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment
Louie Wurch et al.
NATURE COMMUNICATIONS (2016)
Acetogenesis from H2 plus CO2 and nitrogen fixation by an endosymbiotic spirochete of a termite-gut cellulolytic protist
Moriya Ohkuma et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Untargeted metabolomics studies employing NMR and LC-MS reveal metabolic coupling between Nanoarcheum equitans and its archaeal host Ignicoccus hospitalis
Timothy Hamerly et al.
METABOLOMICS (2015)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park
Mircea Podar et al.
BIOLOGY DIRECT (2013)
Cytochrome bd oxidase from Escherichia coli displays high catalase activity: An additional defense against oxidative stress
Vitaliy B. Borisov et al.
FEBS LETTERS (2013)
Insights into the phylogeny and coding potential of microbial dark matter
Christian Rinke et al.
NATURE (2013)
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
Elmar Pruesse et al.
BIOINFORMATICS (2012)
Superoxide dismutases: Ancient enzymes and new insights
Anne-Frances Miller
FEBS LETTERS (2012)
The cytochrome bd respiratory oxygen reductases
Vitaliy B. Borisov et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2011)
Stable hydrogen isotope measurement of archaeal ether-bound hydrocarbons
Masanori Kaneko et al.
ORGANIC GEOCHEMISTRY (2011)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
Acidianus, Sulfolobus and Metallosphaera surface layers: structure, composition and gene expression
Andreas Veith et al.
MOLECULAR MICROBIOLOGY (2009)
Ignicoccus hospitalis and Nanoarchaeum equitans:: ultrastructure, cell-cell interaction, and 3D reconstruction from serial sections of freeze-substituted cells and by electron cryotomography
Benjamin Junglas et al.
ARCHIVES OF MICROBIOLOGY (2008)
The RAST server: Rapid annotations using subsystems technology
Ramy K. Aziz et al.
BMC GENOMICS (2008)
Nanoarchaeum equitans and Ignicoccus hospitalis:: New insights into a unique, intimate association of two archaea
Ulrike Jahn et al.
JOURNAL OF BACTERIOLOGY (2008)
The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism
Kathryne S. Auernik et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5′- and 3′-halves
L Randau et al.
NATURE (2005)
Composition of the lipids of Nanoarchaeum equitans and their origin from its host Ignicoccus sp strain KIN4/I
U Jahn et al.
ARCHIVES OF MICROBIOLOGY (2004)
The genome of Nanoarchaeum equitans:: Insights into early archaeal evolution and derived parasitism
E Waters et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Detection of 16S rDNA sequences representing the novel phylum Nanoarchaeota: Indication for a wide distribution in high temperature biotopes
MJ Hohn et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2002)
A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont
H Huber et al.
NATURE (2002)
InterProScan - an integration platform for the signature-recognition methods in InterPro
EM Zdobnov et al.
BIOINFORMATICS (2001)