4.7 Article

GeneNetTools: tests for Gaussian graphical models with shrinkage

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

DiffNetFDR: differential network analysis with false discovery rate control

Xiao-Fei Zhang et al.

BIOINFORMATICS (2019)

Article Biochemical Research Methods

Exact hypothesis testing for shrinkage-based Gaussian graphical models

Victor Bernal et al.

BIOINFORMATICS (2019)

Article Multidisciplinary Sciences

Gene network approach reveals co-expression patterns in nasal and bronchial epithelium

Kai Imkamp et al.

SCIENTIFIC REPORTS (2019)

Article Biochemical Research Methods

DiffGraph: an R package for identifying gene network rewiring using differential graphical models

Xiao-Fei Zhang et al.

BIOINFORMATICS (2018)

Article Biochemical Research Methods

iDINGO-integrative differential network analysis in genomics with Shiny application

Caleb A. Class et al.

BIOINFORMATICS (2018)

Article Multidisciplinary Sciences

Network inference from glycoproteomics data reveals new reactions in the IgG glycosylation pathway

Elisa Benedetti et al.

NATURE COMMUNICATIONS (2017)

Article Statistics & Probability

STRUCTURAL SIMILARITY AND DIFFERENCE TESTING ON MULTIPLE SPARSE GAUSSIAN GRAPHICAL MODELS

Weidong Liu

ANNALS OF STATISTICS (2017)

Article Biochemistry & Molecular Biology

limma powers differential expression analyses for RNA-sequencing and microarray studies

Matthew E. Ritchie et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Psychology, Clinical

Mental Disorders as Causal Systems: A Network Approach to Posttraumatic Stress Disorder

Richard J. McNally et al.

CLINICAL PSYCHOLOGICAL SCIENCE (2015)

Review Genetics & Heredity

Network medicine: a network-based approach to human disease

Albert-Laszlo Barabasi et al.

NATURE REVIEWS GENETICS (2011)

Article Mathematical & Computational Biology

Sparse inverse covariance estimation with the graphical lasso

Jerome Friedman et al.

BIOSTATISTICS (2008)

Article Biochemical Research Methods

Genetic progression and the waiting time to cancer

Niko Beerenwinkel et al.

PLOS COMPUTATIONAL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

A shrinkage approach to large-scale covariance matrix estimation and implications for functional genomics

J Schafer et al.

STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY (2005)

Article Statistics & Probability

A well-conditioned estimator for large-dimensional covariance matrices

O Ledoit et al.

JOURNAL OF MULTIVARIATE ANALYSIS (2004)