4.3 Article

The complete chloroplast genome of the medicinal plant Paederia foetida L.

Journal

MITOCHONDRIAL DNA PART B-RESOURCES
Volume 7, Issue 7, Pages 1218-1220

Publisher

TAYLOR & FRANCIS LTD
DOI: 10.1080/23802359.2022.2087563

Keywords

Paederia foetida; complete chloroplast genome; phylogenetic analysis

Funding

  1. China Agriculture Research System of MOF and MARA [CARS-21]
  2. Major Program of Increase or Decrease in The Central Government [2060302]
  3. High level talent project of West Anhui University [WGKQ2021024, WGKQ2021026]

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In this study, the first complete chloroplast genome sequence of Paederia foetida was assembled and characterized. The genome was 153,591 bp in length with 37.74% GC content and encoded 133 genes. Phylogenetic analysis revealed the close relationship between P. foetida and P. scandens.
Paederia foetida L. belonging to Rubiaceae family is a perennial medicinal herb widely distributed in India and China. The first complete chloroplast genome sequence of P. foetida was assembled and characterized in this study. The total chloroplast genome was 153,591 bp in length with 37.74% GC content, composed of a large single-copy (LSC) region of 83,677 bp, a small single-copy (SSC) region of 16,888 bp and a pair of inverted repeat (IR) regions of 26,513 bp. The whole chloroplast genome encoded 133 genes, including 88 protein-coding genes, 37 tRNA genes and 8 rRNA genes. Phylogenetic analysis of 30 chloroplast genomes strongly suggested that P. foetida was closely related to P. scandens.

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