Related references
Note: Only part of the references are listed.Commensal Staphylococcus epidermidis contributes to skin barrier homeostasis ceramides
Yue Zheng et al.
CELL HOST & MICROBE (2022)
Availability of vitamin B12 and its lower ligand intermediate α-ribazole impact prokaryotic and protist communities in oceanic systems
Gerrit Wienhausen et al.
ISME JOURNAL (2022)
Commensal microbiota regulates skin barrier function and repair via signaling through the aryl hydrocarbon receptor
Aayushi Uberoi et al.
CELL HOST & MICROBE (2021)
A Janus-Faced Bacterium: Host-Beneficial and -Detrimental Roles of Cutibacterium acnes
Holger Bruggemann et al.
FRONTIERS IN MICROBIOLOGY (2021)
Archaea Are Rare and Uncommon Members of the Mammalian Skin Microbiome
Alexander K. Umbach et al.
MSYSTEMS (2021)
Metagenomic and chemical characterization of soil cobalamin production
Xinda Lu et al.
ISME JOURNAL (2020)
KofamKOALA: KEGG Ortholog assignment based on profile HMM and adaptive score threshold
Takuya Aramaki et al.
BIOINFORMATICS (2020)
Microbial predictors of healing and short-term effect of debridement on the microbiome of chronic wounds
Samuel Verbanic et al.
NPJ BIOFILMS AND MICROBIOMES (2020)
The commensal skin microbiota triggers type I IFN-dependent innate repair responses in injured skin
Jeremy Di Domizio et al.
NATURE IMMUNOLOGY (2020)
Sharing vitamins: Cobamides unveil microbial interactions
Olga M. Sokolovskaya et al.
SCIENCE (2020)
A Cutibacterium acnes antibiotic modulates human skin microbiota composition in hair follicles
Jan Claesen et al.
SCIENCE TRANSLATIONAL MEDICINE (2020)
Short chain fatty acids produced by Cutibacterium acnes inhibit biofilm formation by Staphylococcus epidermidis
Kouki Nakamura et al.
SCIENTIFIC REPORTS (2020)
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
Alon Shaiber et al.
GENOME BIOLOGY (2020)
Cross-exchange of B-vitamins underpins a mutualistic interaction between Ostreococcus tauri and Dinoroseobacter shibae
Matthew B. Cooper et al.
ISME JOURNAL (2019)
New Insights into the Intrinsic and Extrinsic Factors That Shape the Human Skin Microbiome
Pedro A. Dimitriu et al.
MBIO (2019)
B-Vitamin Sharing Promotes Stability of Gut Microbial Communities
Vandana Sharma et al.
FRONTIERS IN MICROBIOLOGY (2019)
Micronutrient Requirements and Sharing Capabilities of the Human Gut Microbiome
Dmitry A. Rodionov et al.
FRONTIERS IN MICROBIOLOGY (2019)
Oral vitamin B12 supplement is delivered to the distal gut, altering the corrinoid profile and selectively depleting Bacteroides in C57BL/6 mice
Caleb J Kelly et al.
Gut Microbes (2019)
Cofactor Selectivity in Methylmalonyl Coenzyme A Mutase, a Model Cobamide-Dependent Enzyme
Olga M. Sokolovskaya et al.
MBIO (2019)
MAIT cells are imprinted by the microbiota in early life and promote tissue repair
Michael G. Constantinides et al.
SCIENCE (2019)
A Cautionary Report for Pathogen Identification Using Shotgun Metagenomics; A Comparison to Aerobic Culture and Polymerase Chain Reaction for Salmonella enterica Identification
Enrique Doster et al.
FRONTIERS IN MICROBIOLOGY (2019)
Uneven distribution of cobamide biosynthesis and dependence in bacteria predicted by comparative genomics
Amanda N. Shelton et al.
ISME JOURNAL (2019)
Impact of Cyanocobalamin and Methylcobalamin on Inflammatory Bowel Disease and the Intestinal Microbiota Composition
Xuan Zhu et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2019)
The microbiome in patients with atopic dermatitis
Amy S. Paller et al.
JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY (2019)
Human skin microbiota is a rich source of bacteriocin-producing staphylococci that kill human pathogens
Julie N. O'Sullivan et al.
FEMS MICROBIOLOGY ECOLOGY (2019)
Improved metagenomic analysis with Kraken 2
Derrick E. Wood et al.
GENOME BIOLOGY (2019)
Common skin bacteria protect their host from oxidative stress through secreted antioxidant RoxP
Tilde Andersson et al.
SCIENTIFIC REPORTS (2019)
Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families
Ioanna Kalvari et al.
NUCLEIC ACIDS RESEARCH (2018)
fastp: an ultra-fast all-in-one FASTQ preprocessor
Shifu Chen et al.
BIOINFORMATICS (2018)
Non-classical Immunity Controls Microbiota Impact on Skin Immunity and Tissue Repair
Jonathan L. Linehan et al.
CELL (2018)
Mosaic patterns of B-vitamin synthesis and utilization in a natural marine microbial community
Laura Gomez-Consarnau et al.
ENVIRONMENTAL MICROBIOLOGY (2018)
Isolation and Identification of the Follicular Microbiome: Implications for Acne Research
Jacob B. Hall et al.
JOURNAL OF INVESTIGATIVE DERMATOLOGY (2018)
Cutibacterium acnes (Propionibacterium acnes) and acne vulgaris: a brief look at the latest updates
B. Dreno et al.
JOURNAL OF THE EUROPEAN ACADEMY OF DERMATOLOGY AND VENEREOLOGY (2018)
The human skin microbiome
Allyson L. Byrd et al.
NATURE REVIEWS MICROBIOLOGY (2018)
Linking pangenomes and metagenomes: the Prochlorococcus metapangenome
Tom O. Delmont et al.
PEERJ (2018)
Protective effect of pre- and post-vitamin C treatments on UVB-irradiation-induced skin damage
Saki Kawashima et al.
SCIENTIFIC REPORTS (2018)
Cobalamin (Vitamin B12) Induced a Shift in Microbial Composition and Metabolic Activity in an in vitro Colon Simulation
Yuanyuan Xu et al.
FRONTIERS IN MICROBIOLOGY (2018)
Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
Nicole M. Davis et al.
MICROBIOME (2018)
Host-microbiome interactions and recent progress into understanding the biology of acne vulgaris
Alan M. O'Neill et al.
MICROBIOME (2018)
Propionibacterium spp.-source of propionic acid, vitamin B12, and other metabolites important for the industry
Kamil Piwowarek et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2018)
Two distinct pools of B12 analogs reveal community interdependencies in the ocean
Katherine R. Heal et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
GGTREE: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
Guangchuang Yu et al.
METHODS IN ECOLOGY AND EVOLUTION (2017)
Underlying mechanisms for syntrophic metabolism of essential enzyme cofactors in microbial communities
Margaret F. Romine et al.
ISME JOURNAL (2017)
Cobalamin riboswitches exhibit a broad range of ability to discriminate between methylcobalamin and adenosylcobalamin
Jacob T. Polaski et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2017)
Microbial production of vitamin B12: a review and future perspectives
Huan Fang et al.
MICROBIAL CELL FACTORIES (2017)
Staphylococcus aureus and Staphylococcus epidermidis strain diversity underlying pediatric atopic dermatitis
Allyson L. Byrd et al.
SCIENCE TRANSLATIONAL MEDICINE (2017)
Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis
Teruaki Nakatsuji et al.
SCIENCE TRANSLATIONAL MEDICINE (2017)
Microbial Metabolic Networks at the Mucus Layer Lead to Diet-Independent Butyrate and Vitamin B12 Production by Intestinal Symbionts
Clara Belzer et al.
MBIO (2017)
A longitudinal study of the diabetic skin and wound microbiome
Melissa Gardiner et al.
PEERJ (2017)
Endogenous Antimicrobial Peptide Expression in Response to Bacterial Epidermal Colonization
Michael Brandwein et al.
FRONTIERS IN IMMUNOLOGY (2017)
Commensal Microbes and Hair Follicle Morphogenesis Coordinately Drive Treg Migration into Neonatal Skin
Tiffany C. Scharschmidt et al.
CELL HOST & MICROBE (2017)
Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
Yujie Men et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2017)
Bracken: estimating species abundance in metagenomics data
Jennifer Lu et al.
PEERJ COMPUTER SCIENCE (2017)
Genomics and taxonomy in diagnostics for food security: soft-rotting enterobacterial plant pathogens
Leighton Pritchard et al.
ANALYTICAL METHODS (2016)
Antagonism between Staphylococcus epidermidis and Propionibacterium acnes and its genomic basis
Gitte J. M. Christensen et al.
BMC GENOMICS (2016)
Temporal Stability of the Human Skin Microbiome
Julia Oh et al.
CELL (2016)
The Vitamin B1 and B12 Required by the Marine Dinoflagellate Lingulodinium polyedrum Can Be Provided by Its Associated Bacterial Community in Culture
Ricardo Cruz-Lopez et al.
FRONTIERS IN MICROBIOLOGY (2016)
Strain-Level Differences in Porphyrin Production and Regulation in Propionibacterium acnes Elucidate Disease Associations
Tremylla Johnson et al.
MSPHERE (2016)
The Role of the Skin Microbiome in Atopic Dermatitis
Michael R. Williams et al.
CURRENT ALLERGY AND ASTHMA REPORTS (2015)
Vitamin B12 modulates the transcriptome of the skin microbiota in acne pathogenesis
Dezhi Kang et al.
SCIENCE TRANSLATIONAL MEDICINE (2015)
The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome
Geoffrey D. Hannigan et al.
MBIO (2015)
Sparse and Compositionally Robust Inference of Microbial Ecological Networks
Zachary D. Kurtz et al.
PLOS COMPUTATIONAL BIOLOGY (2015)
Anvi'o: an advanced analysis and visualization platformfor 'omics data
A. Murat Eren et al.
PEERJ (2015)
Systematic genome assessment of B-vitamin biosynthesis suggests co-operation among gut microbes
Stefania Magnusdottir et al.
FRONTIERS IN GENETICS (2015)
Identification of specific corrinoids reveals corrinoid modification in dechlorinating microbial communities
Yujie Men et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production
Andrew C. Doxey et al.
ISME JOURNAL (2015)
BluB/CobT2 fusion enzyme activity reveals mechanisms responsible for production of active form of vitamin B12 by Propionibacterium freudenreichii
Paulina Deptula et al.
MICROBIAL CELL FACTORIES (2015)
Human Gut Microbes Use Multiple Transporters to Distinguish Vitamin B12 Analogs and Compete in the Gut
Patrick H. Degnan et al.
CELL HOST & MICROBE (2014)
Vitamin B12 as a Modulator of Gut Microbial Ecology
Patrick H. Degnan et al.
CELL METABOLISM (2014)
Direct exchange of vitamin B12 is demonstrated by modelling the growth dynamics of algal-bacterial cocultures
Matthew A. A. Grant et al.
ISME JOURNAL (2014)
Biogeography and individuality shape function in the human skin metagenome
Julia Oh et al.
NATURE (2014)
Propionibacterium-Produced Coproporphyrin III Induces Staphylococcus aureus Aggregation and Biofilm Formation
Michael S. Wollenberg et al.
MBIO (2014)
Infernal 1.1: 100-fold faster RNA homology searches
Eric P. Nawrocki et al.
BIOINFORMATICS (2013)
Cobamide Structure Depends on Both Lower Ligand Availability and CobT Substrate Specificity
Terence S. Crofts et al.
CHEMISTRY & BIOLOGY (2013)
Analysis of Substrate Specificity in CobT Homo logs Reveals Widespread Preference for DMB, the Lower Axial Ligand of Vitamin B12
Amrita B. Hazra et al.
CHEMISTRY & BIOLOGY (2013)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
Analysis of Complete Genomes of Propionibacterium acnes Reveals a Novel Plasmid and Increased Pseudogenes in an Acne Associated Strain
Gabriela Kasimatis et al.
BIOMED RESEARCH INTERNATIONAL (2013)
The Genus Corynebacterium and Other Medically Relevant Coryneform-Like Bacteria
Kathryn Bernard
JOURNAL OF CLINICAL MICROBIOLOGY (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Compartmentalized Control of Skin Immunity by Resident Commensals
Shruti Naik et al.
SCIENCE (2012)
ggbio: an R package for extending the grammar of graphics for genomic data
Tengfei Yin et al.
GENOME BIOLOGY (2012)
Skin Commensals Amplify the Innate Immune Response to Pathogens by Activation of Distinct Signaling Pathways
Ines Wanke et al.
JOURNAL OF INVESTIGATIVE DERMATOLOGY (2011)
Microbial Symbiosis with the Innate Immune Defense System of the Skin
Richard L. Gallo et al.
JOURNAL OF INVESTIGATIVE DERMATOLOGY (2011)
The skin microbiome
Elizabeth A. Grice et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Riboswitches: Structures and Mechanisms
Andrew D. Garst et al.
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2011)
Accelerated Profile HMM Searches
Sean R. Eddy
PLOS COMPUTATIONAL BIOLOGY (2011)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization
Yan Zhang et al.
BMC GENOMICS (2009)
Topographical and Temporal Diversity of the Human Skin Microbiome
Elizabeth A. Grice et al.
SCIENCE (2009)
The genome of Rhodobacter sphaeroides strain 2.4.1 encodes functional cobinamide salvaging systems of archaeal and bacterial origins
Michael J. Gray et al.
MOLECULAR MICROBIOLOGY (2008)
Visualization and characterization of UVB-induced reactive oxygen species in a human skin equivalent model
Tomohiro Hakozaki et al.
ARCHIVES OF DERMATOLOGICAL RESEARCH (2008)
BluB cannibalizes flavin to form the lower ligand of vitamin B12
Michiko E. Taga et al.
NATURE (2007)
Single-enzyme conversion of FMNH2 to 5,6-dimethylbenzimidazole, the lower ligand of B12
Michael J. Gray et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Sinorhizobium meliloti bluB is necessary for production of 5,6-dimethylbenzimidazole, the lower ligand of B12
GRO Campbell et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Algae acquire vitamin B12 through a symbiotic relationship with bacteria
MT Croft et al.
NATURE (2005)
Atopic dermatitis
HC Williams
NEW ENGLAND JOURNAL OF MEDICINE (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
The complete genome sequence of Propionibacterium acnes, a commensal of human skin
H Brüggemann et al.
SCIENCE (2004)
Coenzyme B-12 riboswitches are widespread genetic control elements in prokaryotes
A Nahvi et al.
NUCLEIC ACIDS RESEARCH (2004)
Protein thiol modifications visualized in vivo
LI Leichert et al.
PLOS BIOLOGY (2004)
Oxidative stress inactivates cobalamin-independent methionine synthase (MetE) in Escherichia coli
ER Hondorp et al.
PLOS BIOLOGY (2004)
Microbial production of vitamin B-12
JH Martens et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2002)
Share Paper
