4.7 Article

Differing Responses to Phytophthora cinnamomi Infection in Susceptible and Partially Resistant Persea americana (Mill.) Rootstocks: A Case for the Role of Receptor-Like Kinases and Apoplastic Proteases

Related references

Note: Only part of the references are listed.
Article Plant Sciences

Partially Resistant Avocado Rootstock Dusa(R) Shows Prolonged Upregulation of Nucleotide Binding-Leucine Rich Repeat Genes in Response to Phytophthora cinnamomi Infection

Alicia Fick et al.

Summary: This study identified a total of 161 putative resistance genes in the genome of Persea americana, and these genes were grouped into 13 distinct clusters. The partially resistant avocado rootstock showed increased expression levels of resistance genes following infection, indicating a stronger immune response.

FRONTIERS IN PLANT SCIENCE (2022)

Review Plant Sciences

The front line of defence: a meta-analysis of apoplastic proteases in plant immunity

Alice Godson et al.

Summary: Apoplastic proteases play crucial roles in plant defense, with most being induced upon infection and 17 genetically required for the immune response. While the proteolytic activity of these proteases has been confirmed, its necessity for biological function is not always clear.

JOURNAL OF EXPERIMENTAL BOTANY (2021)

Review Plant Sciences

Advances in Understanding Defense Mechanisms in Persea americana Against Phytophthora cinnamomi

Noelani van den Berg et al.

Summary: This review provides an overview of the molecular defense pathways utilized by resistant avocado rootstock against Phytophthora cinnamomi, including phytohormone profiles, pathogenesis-related gene expression, and cell wall modification. Recent advances such as composite plant transformation, single nucleotide polymorphism (SNP) analyses, genomics, and transcriptomics will further elucidate avocado defense mechanisms.

FRONTIERS IN PLANT SCIENCE (2021)

Article Biotechnology & Applied Microbiology

Genome of the destructive oomycete Phytophthora cinnamomi provides insights into its pathogenicity and adaptive potential

Juanita Engelbrecht et al.

Summary: This study has produced a high-quality reference genome and annotation for Phytophthora cinnamomi, shedding light on its genome characteristics and the important roles of pathogenicity-related genes.

BMC GENOMICS (2021)

Article Microbiology

Characterization of CRN-Like Genes From Plasmopara viticola: Searching for the Most Virulent Ones

Gaoqing Xiang et al.

Summary: The study identified and characterized CRN-like genes from the P. viticola genome, indicating high sequence similarities among PvCRN genes in different isolates. Genetic divergence suggests different roles for the PvCRN genes. Phylogenetic analysis revealed potential functional diversity within the CRN superfamily as a result of independent evolution of Plasmopara species. The study sheds light on the effector repertoire of P. viticola YL and contributes to understanding the molecular mechanisms of grapevine downy mildew pathogenesis.

FRONTIERS IN MICROBIOLOGY (2021)

Article Multidisciplinary Sciences

Expression of several Phytophthora cinnamomi putative RxLRs provides evidence for virulence roles in avocado

Melissa Joubert et al.

Summary: This study identified candidate RxLR effectors in Phytophthora cinnamomi and inferred possible functions for these effectors, shedding light on their roles in avocado root rot. The expression profiles of these RxLR genes during infection of avocado suggest their potential virulence roles, providing a foundation for future functional characterization studies.

PLOS ONE (2021)

Article Biochemistry & Molecular Biology

PHI-base: the pathogen-host interactions database

Martin Urban et al.

NUCLEIC ACIDS RESEARCH (2020)

Article Multidisciplinary Sciences

N-glycosylation shields Phytophthora sojae apoplastic effector PsXEG1 from a specific host aspartic protease

Yeqiang Xia et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)

Article Plant Sciences

The Phytophthora RXLR Effector Avrblb2 Modulates Plant Immunity by Interfering With Ca2+Signaling Pathway

Zunaira Afzal Naveed et al.

FRONTIERS IN PLANT SCIENCE (2019)

Review Plant Sciences

Activity and Phylogenetics of the Broadly Occurring Family of Microbial Nep1-Like Proteins

Michael F. Seidl et al.

ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 57, 2019 (2019)

Review Plant Sciences

The plant hypersensitive response: concepts, control and consequences

Peter Balint-Kurti

MOLECULAR PLANT PATHOLOGY (2019)

Article Biotechnology & Applied Microbiology

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

Daehwan Kim et al.

NATURE BIOTECHNOLOGY (2019)

Article Biochemistry & Molecular Biology

MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis

Rainer Schwacke et al.

MOLECULAR PLANT (2019)

Article Plant Sciences

Phytophthora cinnamomi

Adrienne R. Hardham et al.

MOLECULAR PLANT PATHOLOGY (2018)

Review Plant Sciences

From structure to function - a family portrait of plant subtilases

Andreas Schaller et al.

NEW PHYTOLOGIST (2018)

Review Microbiology

Two's company: studying interspecies relationships with dual RNA-seq

Thomas Wolf et al.

CURRENT OPINION IN MICROBIOLOGY (2018)

Article Biochemistry & Molecular Biology

Phytophthora parasitica Effector PpRxLR2 Suppresses Nicotiana benthamiana Immunity

R. J. D. Dalio et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2018)

Review Biochemistry & Molecular Biology

The cloak, dagger, and shield: proteases in plant-pathogen interactions

Shuguo Hou et al.

BIOCHEMICAL JOURNAL (2018)

Article Agronomy

Phytophthora infestans effector Pi14054 is a novel candidate suppressor of host silencing mechanisms

Ramesh R. Vetukuri et al.

EUROPEAN JOURNAL OF PLANT PATHOLOGY (2017)

Article Biochemical Research Methods

MultiQC: summarize analysis results for multiple tools and samples in a single report

Philip Ewels et al.

BIOINFORMATICS (2016)

Editorial Material Biology

Q&A: How does peptide signaling direct plant development?

Maike Breiden et al.

BMC BIOLOGY (2016)

Review Plant Sciences

Nine things to know about elicitins

Lida Derevnina et al.

NEW PHYTOLOGIST (2016)

Article Plant Sciences

Cell Death Control by Matrix Metalloproteinases

Dirk Zimmermann et al.

PLANT PHYSIOLOGY (2016)

Review Immunology

Regulation of pattern recognition receptor signalling in plants

Daniel Couto et al.

NATURE REVIEWS IMMUNOLOGY (2016)

Review Plant Sciences

Effector-Triggered Immunity: From Pathogen Perception to Robust Defense

Haitao Cui et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 66 (2015)

Article Biotechnology & Applied Microbiology

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Mihaela Pertea et al.

NATURE BIOTECHNOLOGY (2015)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Review Plant Sciences

Immune receptor complexes at the plant cell surface

Hannah Boehm et al.

CURRENT OPINION IN PLANT BIOLOGY (2014)

Article Plant Sciences

Callose-mediated resistance to pathogenic intruders in plant defense-related papillae

Christian A. Voigt

FRONTIERS IN PLANT SCIENCE (2014)

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

Article Multidisciplinary Sciences

RNA-Seq Reveals Infection-Related Gene Expression Changes in Phytophthora capsici

Xiao-Ren Chen et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

Expression of defence-related genes against Phytophthora cinnamomi in five avocado rootstocks

Juanita Engelbrecht et al.

SOUTH AFRICAN JOURNAL OF SCIENCE (2013)

Article Microbiology

An Extracellular Subtilase Switch for Immune Priming in Arabidopsis

Vicente Ramirez et al.

PLOS PATHOGENS (2013)

Review Plant Sciences

Catalyzing plant science research with RNA-seq

Laetitia B. B. Martin et al.

FRONTIERS IN PLANT SCIENCE (2013)

Review Microbiology

Dual RNA-seq of pathogen and host

Alexander J. Westermann et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Article Plant Sciences

DEVDase activity is induced in potato leaves during Phytophthora infestans infection

Maria Belen Fernandez et al.

PLANT PHYSIOLOGY AND BIOCHEMISTRY (2012)

Review Biochemistry & Molecular Biology

A plant alternative to animal caspases: subtilisin-like proteases

A. B. Vartapetian et al.

CELL DEATH AND DIFFERENTIATION (2011)

Article Multidisciplinary Sciences

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

Fran Supek et al.

PLOS ONE (2011)

Article Biochemical Research Methods

Expression and purification of a biologically active Phytophthora parasitica cellulose binding elicitor lectin in Pichia pastoris

Mathieu Larroque et al.

PROTEIN EXPRESSION AND PURIFICATION (2011)

Article Biochemistry & Molecular Biology

Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity

Nina V. Chichkova et al.

EMBO JOURNAL (2010)

Article Multidisciplinary Sciences

Ancient class of translocated oomycete effectors targets the host nucleus

Sebastian Schornack et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biotechnology & Applied Microbiology

Gene ontology analysis for RNA-seq: accounting for selection bias

Matthew D. Young et al.

GENOME BIOLOGY (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

BLAST plus : architecture and applications

Christiam Camacho et al.

BMC BIOINFORMATICS (2009)

Article Biochemistry & Molecular Biology

Overexpression of Rice (Oryza sativa L.) OsCDR1 Leads to Constitutive Activation of Defense Responses in Rice and Arabidopsis

Bishun Deo Prasad et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2009)

Article Multidisciplinary Sciences

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

Brian J. Haas et al.

NATURE (2009)

Article Multidisciplinary Sciences

Apoplastic effectors secreted by two unrelated eukaryotic plant pathogens target the tomato defense protease Rcr3

Jing Song et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Biochemistry & Molecular Biology

Structure of the glucanase inhibitor protein (GIP) family from Phytophthora species suggests coevolution with plant endo-β-1,3-glucanases

Cynthia M. B. Damasceno et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2008)

Article Biochemistry & Molecular Biology

Fungal effector protein AVR2 targets diversifying defense-related Cys proteases of tomato

Mohammed Shabab et al.

PLANT CELL (2008)

Article Biochemistry & Molecular Biology

The Cladosporium fulvum virulence protein Avr2 inhibits host proteases required for basal defense

H. Peter van Esse et al.

PLANT CELL (2008)

Article Multidisciplinary Sciences

RXLR effector reservoir in two Phytophthora species is dominated by a single rapidly evolving superfamily with more than 700 members

Rays H. Y. Jiang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Review Plant Sciences

Groovy times: filamentous pathogen effectors revealed

Sophien Kamoun

CURRENT OPINION IN PLANT BIOLOGY (2007)

Review Multidisciplinary Sciences

The plant immune system

Jonathan D. G. Jones et al.

NATURE (2006)

Article Multidisciplinary Sciences

Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis

Brett M. Tyler et al.

SCIENCE (2006)

Review Plant Sciences

Phytophthora cinnamomi

AR Hardham

MOLECULAR PLANT PATHOLOGY (2005)

Review Plant Sciences

Plants and animals: a different taste for microbes?

C Zipfel et al.

CURRENT OPINION IN PLANT BIOLOGY (2005)

Article Biochemistry & Molecular Biology

An extracellular aspartic protease functions in Arabidopsis disease resistance signaling

YJ Xia et al.

EMBO JOURNAL (2004)

Review Plant Sciences

The Nep1-like proteins - a growing family of microbial elicitors of plant necrosis

CL Pemberton et al.

MOLECULAR PLANT PATHOLOGY (2004)

Review Cell Biology

Mechanisms of caspase activation

KM Boatright et al.

CURRENT OPINION IN CELL BIOLOGY (2003)

Review Biotechnology & Applied Microbiology

Plant disease resistance genes: recent insights and potential applications

JM McDowell et al.

TRENDS IN BIOTECHNOLOGY (2003)

Article Plant Sciences

Phylogeny and historical biogeography of Lauraceae: Evidence from the chloroplast and nuclear genomes

AS Chanderbali et al.

ANNALS OF THE MISSOURI BOTANICAL GARDEN (2001)