Journal
PLOS COMPUTATIONAL BIOLOGY
Volume 18, Issue 6, Pages -Publisher
PUBLIC LIBRARY SCIENCE
DOI: 10.1371/journal.pcbi.1010281
Keywords
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Funding
- Research Grants Council (RGC) of Hong Kong, China [C7123-20G]
- National Natural Science Foundation of China [31871340, 71974165]
- Health and Medical Research Fund, the Food and Health Bureau, the Government of the Hong Kong Special Administrative Region [COVID190103, INF-CUHK-1]
- Chinese University of Hong Kong [PIEF/Ph2/COVID/06, 4054600]
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In the context of infectious disease transmission, superspreading phenomena can be better characterized by a Delaporte distribution model compared to the traditional negative binomial (NB) distribution, providing improvements in describing the distributions of COVID-19 and SARS cases. Population-wide interventions are suggested as the primary strategy for controlling disease transmission during the COVID-19 pandemic, followed by high-risk-specific control strategies to lower the risk of superspreading.
In the context of infectious disease transmission, high heterogeneity in individual infectiousness indicates that a few index cases can generate large numbers of secondary cases, a phenomenon commonly known as superspreading. The potential of disease superspreading can be characterized by describing the distribution of secondary cases (of each seed case) as a negative binomial (NB) distribution with the dispersion parameter, k. Based on the feature of NB distribution, there must be a proportion of individuals with individual reproduction number of almost 0, which appears restricted and unrealistic. To overcome this limitation, we generalized the compound structure of a Poisson rate and included an additional parameter, and divided the reproduction number into independent and additive fixed and variable components. Then, the secondary cases followed a Delaporte distribution. We demonstrated that the Delaporte distribution was important for understanding the characteristics of disease transmission, which generated new insights distinct from the NB model. By using real-world dataset, the Delaporte distribution provides improvements in describing the distributions of COVID-19 and SARS cases compared to the NB distribution. The model selection yielded increasing statistical power with larger sample sizes as well as conservative type I error in detecting the improvement in fitting with the likelihood ratio (LR) test. Numerical simulation revealed that the control strategy-making process may benefit from monitoring the transmission characteristics under the Delaporte framework. Our findings highlighted that for the COVID-19 pandemic, population-wide interventions may control disease transmission on a general scale before recommending the high-risk-specific control strategies. Author summary Superspreading is one of the key transmission features of many infectious diseases and is considered a consequence of the heterogeneity in infectiousness of individual cases. To characterize the superspreading potential, we divided individual infectiousness into two independent and additive components, including a fixed baseline and a variable part. Such decomposition produced an improvement in the fit of the model explaining the distribution of real-world datasets of COVID-19 and SARS that can be captured by the classic statistical tests. Disease control strategies may be developed by monitoring the characteristics of superspreading. For the COVID-19 pandemic, population-wide interventions are suggested first to limit the transmission at a scale of general population, and then high-risk-specific control strategies are recommended subsequently to lower the risk of superspreading.
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