Related references
Note: Only part of the references are listed.LAMMPS-a flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales
Aidan P. Thompson et al.
COMPUTER PHYSICS COMMUNICATIONS (2022)
The Role of Topoisomerase II in DNA Repair and Recombination in Arabidopsis thaliana
Marina Martinez-Garcia et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Live imaging and biophysical modeling support a button-based mechanism of somatic homolog pairing in Drosophila
Myron Barber Child et al.
ELIFE (2021)
Chromatin Is Frequently Unknotted at the Megabase Scale
Dimos Goundaroulis et al.
BIOPHYSICAL JOURNAL (2020)
Topoisomerases Modulate the Timing of Meiotic DNA Breakage and Chromosome Morphogenesis in Saccharomyces cerevisiae
Jonna Heldrich et al.
GENETICS (2020)
Spatial constraints on chromosomes are instrumental to meiotic pairing
Miao Tian et al.
JOURNAL OF CELL SCIENCE (2020)
Torsional Turning Motion of Chromosomes as an Accelerating Force to Align Homologous Chromosomes during Meiosis
Kazutaka Takao et al.
JOURNAL OF THE PHYSICAL SOCIETY OF JAPAN (2019)
Rouse model with transient intramolecular contacts on a timescale of seconds recapitulates folding and fluctuation of yeast chromosomes
Marius Socol et al.
NUCLEIC ACIDS RESEARCH (2019)
A conserved filamentous assembly underlies the structure of the meiotic chromosome axis
Alan M. West et al.
ELIFE (2019)
Modeling meiotic chromosome pairing: a tug of war between telomere forces and a pairing-based Brownian ratchet leads to increased pairing fidelity
Wallace F. Marshall et al.
PHYSICAL BIOLOGY (2019)
TOPII and chromosome movement help remove interlocks between entangled chromosomes during meiosis
Marina Martinez-Garcia et al.
JOURNAL OF CELL BIOLOGY (2018)
Universal Knot Spectra for Confined Polymers
Liang Dai et al.
MACROMOLECULES (2018)
Chromatin Loop Extrusion and Chromatin Unknotting
Dusan Racko et al.
POLYMERS (2018)
Meiotic recombination modulates the structure and dynamics of the synaptonemal complex during C. elegans meiosis
Divya Pattabiraman et al.
PLOS GENETICS (2017)
Single-molecule observation of DNA compaction by meiotic protein SYCP3
Johanna L. Syrjanen et al.
ELIFE (2017)
Inferring the physical properties of yeast chromatin through Bayesian analysis of whole nucleus simulations
Jean-Michel Arbona et al.
GENOME BIOLOGY (2017)
A Method for Molecular Dynamics on Curved Surfaces
Stefan Paquay et al.
BIOPHYSICAL JOURNAL (2016)
Meiotic Nuclear Oscillations Are Necessary to Avoid Excessive Chromosome Associations
Mariola R. Chacon et al.
CELL REPORTS (2016)
Modeling meiotic chromosome pairing: nuclear envelope attachment, telomere-led active random motion, and anomalous diffusion
Wallace F. Marshall et al.
PHYSICAL BIOLOGY (2016)
Recombination, Pairing, and Synapsis of Homologs during Meiosis
Denise Zickler et al.
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2015)
Topoisomerase II mediates meiotic crossover interference
Liangran Zhang et al.
NATURE (2014)
Chromosome pairing and synapsis during Caenorhabditis elegans meiosis
Ofer Rog et al.
CURRENT OPINION IN CELL BIOLOGY (2013)
Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
Job Dekker et al.
NATURE REVIEWS GENETICS (2013)
Multiple Opposing Constraints Govern Chromosome Interactions during Meiosis
Doris Y. Lui et al.
PLOS GENETICS (2013)
Increased chromosome mobility facilitates homology search during recombination
Judith Mine-Hattab et al.
NATURE CELL BIOLOGY (2012)
Modeling Meiotic Chromosomes Indicates a Size Dependent Contribution of Telomere Clustering and Chromosome Rigidity to Homologue Juxtaposition
Christopher A. Penfold et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Full-Length Synaptonemal Complex Grows Continuously during Meiotic Prophase in Budding Yeast
Karen Voelkel-Meiman et al.
PLOS GENETICS (2012)
Meiotic Chromosome Pairing Is Promoted by Telomere-Led Chromosome Movements Independent of Bouquet Formation
Chih-Ying Lee et al.
PLOS GENETICS (2012)
Mps3 SUN domain is important for chromosome motion and juxtaposition of homologous chromosomes during meiosis
Hanumanthu B. D. Prasada Rao et al.
GENES TO CELLS (2011)
Sustained and Rapid Chromosome Movements Are Critical for Chromosome Pairing and Meiotic Progression in Budding Yeast
Megan Sonntag Brown et al.
GENETICS (2011)
Homologous pairing and the role of pairing centers in meiosis
Jui-He Tsai et al.
JOURNAL OF CELL SCIENCE (2011)
Interactions Between Nuclei and the Cytoskeleton Are Mediated by SUN-KASH Nuclear-Envelope Bridges
Daniel A. Starr et al.
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 26 (2010)
Visualization and analysis of atomistic simulation data with OVITO-the Open Visualization Tool
Alexander Stukowski
MODELLING AND SIMULATION IN MATERIALS SCIENCE AND ENGINEERING (2010)
Identification and Characterization of Nuclear Pore Complex Components in Arabidopsis thaliana
Kentaro Tamura et al.
PLANT CELL (2010)
Cytoskeletal Forces Span the Nuclear Envelope to Coordinate Meiotic Chromosome Pairing and Synapsis
Aya Sato et al.
CELL (2009)
Interlock Formation and Coiling of Meiotic Chromosome Axes During Synapsis
Chung-Ju Rachel Wang et al.
GENETICS (2009)
Identification of chromosome sequence motifs that mediate meiotic pairing and synapsis in C. elegans
Carolyn M. Phillips et al.
NATURE CELL BIOLOGY (2009)
Meiotic chromosomes move by linkage to dynamic actin cables with transduction of force through the nuclear envelope
R. Koszul et al.
CELL (2008)
Rapid telomere movement in meiotic prophase is promoted by NDJ1, MPS3, and CSM4 and is modulated by recombination
Michael N. Conrad et al.
CELL (2008)
Mapping in Vivo Chromatin Interactions in Yeast Suggests an Extended Chromatin Fiber with Regional Variation in Compaction
Job Dekker
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Csm4, in Collaboration with Ndj1, Mediates Telomere-Led Chromosome Dynamics and Recombination during Yeast Meiosis
Jennifer J. Wanat et al.
PLOS GENETICS (2008)
Csm4-Dependent Telomere Movement on Nuclear Envelope Promotes Meiotic Recombination
Hiromichi Kosaka et al.
PLOS GENETICS (2008)
Chromosome mobility during meiotic prophase in Saccharomyces cerevisiae
Harry Scherthan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Spontaneous knotting of an agitated string
Dorian M. Raymer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
MPS3 mediates meiotic bouquet formation in Saccharomyces cerevisiae
Michael N. Conrad et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Knotting of random ring polymers in confined spaces
C Micheletti et al.
JOURNAL OF CHEMICAL PHYSICS (2006)
Identifying the primitive path mesh in entangled polymer liquids
SK Sukumaran et al.
JOURNAL OF POLYMER SCIENCE PART B-POLYMER PHYSICS (2005)
Meiotic telomere protein Ndj1p is required for meiosis-specific telomere distribution, bouquet formation and efficient homologue pairing
E Trelles-Sticken et al.
JOURNAL OF CELL BIOLOGY (2000)