4.7 Article

Association between germline variants and somatic mutations in colorectal cancer

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival

Syed H. Zaidi et al.

NATURE COMMUNICATIONS (2020)

Article Medicine, Research & Experimental

Hypomethylated gene NRP1 is co-expressed with PDGFRB and associated with poor overall survival in gastric cancer patients

Guanghui Wang et al.

BIOMEDICINE & PHARMACOTHERAPY (2019)

Review Genetics & Heredity

Germline Variants Impact Somatic Events during Tumorigenesis

Johnny R. Ramroop et al.

TRENDS IN GENETICS (2019)

Article Multidisciplinary Sciences

Toll-like receptor 1 predicts favorable prognosis in pancreatic cancer

Mira Lanki et al.

PLOS ONE (2019)

Article Genetics & Heredity

Identifying Putative Susceptibility Genes and Evaluating Their Associations with Somatic Mutations in Human Cancers

Zhishan Chen et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2019)

Article Multidisciplinary Sciences

DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load

Hyunchul Jung et al.

NATURE COMMUNICATIONS (2019)

Article Oncology

Cancer statistics, 2019

Rebecca L. Siegel et al.

CA-A CANCER JOURNAL FOR CLINICIANS (2019)

Article Genetics & Heredity

Discovery of common and rare genetic risk variants for colorectal cancer

Jeroen R. Huyghe et al.

NATURE GENETICS (2019)

Article Biochemistry & Molecular Biology

FBW7 suppresses metastasis of colorectal cancer by inhibiting HIF1α/CEACAM5 functional axis

Qingguo Li et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES (2018)

Article Medicine, Research & Experimental

The deubiquitinase USP9X regulates FBW7 stability and suppresses colorectal cancer

Omar M. Khan et al.

JOURNAL OF CLINICAL INVESTIGATION (2018)

Article Oncology

Analysis of DNA methylation in cancer: location revisited

Alexander Koch et al.

NATURE REVIEWS CLINICAL ONCOLOGY (2018)

Article Multidisciplinary Sciences

Pan-cancer transcriptional signatures predictive of oncogenic mutations reveal that Fbw7 regulates cancer cell oxidative metabolism

Ryan J. Davis et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Article Oncology

Genetic Mechanisms of Immune Evasion in Colorectal Cancer

Catherine S. Grasso et al.

CANCER DISCOVERY (2018)

Article Multidisciplinary Sciences

Contribution of allelic imbalance to colorectal cancer

Kimmo Palin et al.

NATURE COMMUNICATIONS (2018)

Article Biochemistry & Molecular Biology

SNP variants at the MAP3K1/SETD9 locus 5q11.2 associate with somatic PIK3CA variants in breast cancers

Roberto Puzone et al.

EUROPEAN JOURNAL OF HUMAN GENETICS (2017)

Article Genetics & Heredity

Next-generation genotype imputation service and methods

Sayantan Das et al.

NATURE GENETICS (2016)

Article Biochemistry & Molecular Biology

VarDict: a novel and versatile variant caller for next-generation sequencing in cancer research

Zhongwu Lai et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Cell Biology

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

Marios Giannakis et al.

CELL REPORTS (2016)

Article Multidisciplinary Sciences

Integrative analysis of 111 reference human epigenomes

Anshul Kundaje et al.

NATURE (2015)

Article Biochemistry & Molecular Biology

Cdx1 and Cdx2 Function as Tumor Suppressors

Alexa Hryniuk et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2014)

Editorial Material Genetics & Heredity

The Cancer Genome Atlas Pan-Cancer analysis project

John N. Weinstein et al.

NATURE GENETICS (2013)

Article Multidisciplinary Sciences

FBXW7α attenuates inflammatory signalling by downregulating C/EBPδ and its target gene Tlr4

Kuppusamy Balamurugan et al.

NATURE COMMUNICATIONS (2013)

Article Biochemical Research Methods

Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs

Christopher T. Saunders et al.

BIOINFORMATICS (2012)

Article Biochemistry & Molecular Biology

VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

Daniel C. Koboldt et al.

GENOME RESEARCH (2012)

Article Multidisciplinary Sciences

Comprehensive molecular characterization of human colon and rectal cancer

Donna M. Muzny et al.

NATURE (2012)

Article Multidisciplinary Sciences

Epigenomic Enhancer Profiling Defines a Signature of Colon Cancer

Batool Akhtar-Zaidi et al.

SCIENCE (2012)

Article Genetics & Heredity

GATES: A Rapid and Powerful Gene-Based Association Test Using Extended Simes Procedure

Miao-Xin Li et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2011)

Article Biochemical Research Methods

LocusZoom: regional visualization of genome-wide association scan results

Randall J. Pruim et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

Kai Wang et al.

NUCLEIC ACIDS RESEARCH (2010)

Review Pathology

Molecular classification and correlates in colorectal cancer

Shuji Ogino et al.

JOURNAL OF MOLECULAR DIAGNOSTICS (2008)

Article Biochemistry & Molecular Biology

Cdx1 inhibits human colon cancer cell proliferation by reducing β-catenin/T-cell factor transcriptional activity

RJ Guo et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2004)

Article Biochemistry & Molecular Biology

DNA methylation down-regulates CDX1 gene expression in colorectal cancer cell lines

ER Suh et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2002)

Article Medicine, General & Internal

Environmental and heritable factors in the causation of cancer - Analyses of cohorts of twins from Sweden, Denmark, and Finland.

P Lichtenstein et al.

NEW ENGLAND JOURNAL OF MEDICINE (2000)