Related references
Note: Only part of the references are listed.Reversible Kinetic Trapping of FUS Biomolecular Condensates
Sayantan Chatterjee et al.
ADVANCED SCIENCE (2022)
Post-translational modifications on RNA-binding proteins: accelerators, brakes, or passengers in neurodegeneration?
Erin L. Sternburg et al.
TRENDS IN BIOCHEMICAL SCIENCES (2022)
Tyrosine phosphorylation regulates hnRNPA2 granule protein partitioning and reduces neurodegeneration
Veronica H. Ryan et al.
EMBO JOURNAL (2021)
Simulation of FUS Protein Condensates with an Adapted Coarse-Grained Model
Zakarya Benayad et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2021)
Amyloid Aggregation under the Lens of Liquid-Liquid Phase Separation
Yanting Xing et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2021)
FUS and TDP-43 Phases in Health and Disease
Bede Portz et al.
TRENDS IN BIOCHEMICAL SCIENCES (2021)
A predictive coarse-grained model for position-specific effects of post-translational modifications
Theodora Myrto Perdikari et al.
BIOPHYSICAL JOURNAL (2021)
Liquid-Liquid Phase Separation of Tau Protein Is Encoded at the Monomeric Level
Xuewei Dong et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2021)
High resolution ensemble description of metamorphic and intrinsically disordered proteins using an efficient hybrid parallel tempering scheme
Rajeswari Appadurai et al.
NATURE COMMUNICATIONS (2021)
EGCG binds intrinsically disordered N-terminal domain of p53 and disrupts p53-MDM2 interaction
Jing Zhao et al.
NATURE COMMUNICATIONS (2021)
Full structural ensembles of intrinsically disordered proteins from unbiased molecular dynamics simulations
Utsab R. Shrestha et al.
COMMUNICATIONS BIOLOGY (2021)
Effects of All-Atom Molecular Mechanics Force Fields on Amyloid Peptide Assembly: The Case of PHF6 Peptide of Tau Protein
Viet Hoang Man et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2021)
Prediction and characterization of liquid-liquid phase separation of minimalistic peptides
Yiming Tang et al.
CELL REPORTS PHYSICAL SCIENCE (2021)
Loss of Dynamic RNA Interaction and Aberrant Phase Separation Induced by Two Distinct Types of ALS/FTD-Linked FUS Mutations
Amirhossein Ghanbari Niaki et al.
MOLECULAR CELL (2020)
Amyloid-Forming Segment Induces Aggregation of FUS-LC Domain from Phase Separation Modulated by Site-Specific Phosphorylation
Xiufang Ding et al.
JOURNAL OF MOLECULAR BIOLOGY (2020)
Valence and patterning of aromatic residues determine the phase behavior of prion-like domains
Erik W. Martin et al.
SCIENCE (2020)
Liquid-liquid phase separation and extracellular multivalent interactions in the tale of galectin-3
Yi-Ping Chiu et al.
NATURE COMMUNICATIONS (2020)
Single-Protein Collapse Determines Phase Equilibria of a Biological Condensate
Han-Yi Chou et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2020)
Molecular Details of Protein Condensates Probed by Microsecond Long Atomistic Simulations
Wenwei Zheng et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2020)
Different Force Fields Give Rise to Different Amyloid Aggregation Pathways in Molecular Dynamics Simulations
Suman Samantray et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2020)
Molecular structure and interactions within amyloid-like fibrils formed by a low-complexity protein sequence from FUS
Myungwoon Lee et al.
NATURE COMMUNICATIONS (2020)
Considerations and Challenges in Studying Liquid-Liquid Phase Separation and Biomolecular Condensates
Simon Alberti et al.
CELL (2019)
FUS pathology in ALS is linked to alterations in multiple ALS-associated proteins and rescued by drugs stimulating autophagy
Lara Marrone et al.
ACTA NEUROPATHOLOGICA (2019)
A Coarse-Grained Molecular Dynamics Approach to the Study of the Intrinsically Disordered Protein α-Synuclein
Rafael Ramis et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2019)
Simulation methods for liquid-liquid phase separation of disordered proteins
Gregory L. Dignon et al.
CURRENT OPINION IN CHEMICAL ENGINEERING (2019)
Temperature-Controlled Liquid-Liquid Phase Separation of Disordered Proteins
Gregory L. Dignon et al.
ACS CENTRAL SCIENCE (2019)
Widespread FUS mislocalization is a molecular hallmark of amyotrophic lateral sclerosis
Giulia E. Tyzack et al.
BRAIN (2019)
Conformational preferences and phase behavior of intrinsically disordered low complexity sequences: insights from multiscale simulations
Kiersten M. Ruff et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2019)
More bang for your buck: Improved use of GPU nodes for GROMACS 2018
Carsten Kutzner et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2019)
Tetrameric Aβ40 and Aβ42 β-Barrel Structures by Extensive Atomistic Simulations. II. In Aqueous Solution
Phuong H. Nguyen et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2019)
Molecular interactions underlying liquid-liquid phase separation of the FUS low-complexity domain
Anastasia C. Murthy et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2019)
Lysine/RNA-interactions drive and regulate biomolecular condensation
Tina Ukmar-Godec et al.
NATURE COMMUNICATIONS (2019)
Molecular Dynamics Simulations Reveal the Inhibitory Mechanism of Dopamine against Human Islet Amyloid Polypeptide (hIAPP) Aggregation and Its Destabilization Effect on hIAPP Protofibrils
Zenghui Lao et al.
ACS CHEMICAL NEUROSCIENCE (2019)
Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation
Utsab R. Shrestha et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Nuclear Import Receptor Inhibits Phase Separation of FUS through Binding to Multiple Sites
Takuya Yoshizawa et al.
CELL (2018)
Phase Separation of FUS Is Suppressed by Its Nuclear Import Receptor and Arginine Methylation
Mario Hofweber et al.
CELL (2018)
Nuclear-Import Receptors Reverse Aberrant Phase Transitions of RNA-Binding Proteins with Prion-like Domains
Lin Guo et al.
CELL (2018)
FUS Phase Separation Is Modulated by a Molecular Chaperone and Methylation of Arginine Cation-π Interactions
Seema Qamar et al.
CELL (2018)
The distinct structural preferences of tau protein repeat domains
Xuhua Li et al.
CHEMICAL COMMUNICATIONS (2018)
Atomic structures of FUS LC domain segments reveal bases for reversible amyloid fibril formation
Feng Luo et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2018)
RNA buffers the phase separation behavior of prion-like RNA binding proteins
Shovamayee Maharana et al.
SCIENCE (2018)
Atomic structures of FUS LC domain segments reveal bases for reversible amyloid fibril formation
Feng Luo et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2018)
Relation between single-molecule properties and phase behavior of intrinsically disordered proteins
Gregory L. Dignon et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
High-Resolution Structures of the Amyloid-β 1-42 Dimers from the Comparison of Four Atomistic Force Fields
Viet Hoang Man et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2017)
Liquid-liquid phase separation of the microtubule-binding repeats of the Alzheimer-related protein Tau
Susmitha Ambadipudi et al.
NATURE COMMUNICATIONS (2017)
Effects of forcefield and sampling method in all-atom simulations of inherently disordered proteins: Application to conformational preferences of human amylin
Enxi Peng et al.
PLOS ONE (2017)
Structure of FUS Protein Fibrils and Its Relevance to Self-Assembly and Phase Separation of Low-Complexity Domains
Dylan T. Murray et al.
CELL (2017)
Phosphorylation of the FUS low-complexity domain disrupts phase separation, aggregation, and toxicity
Zachary Monahan et al.
EMBO JOURNAL (2017)
Does Replica Exchange with Solute Tempering Efficiently Sample Aβ Peptide Conformational Ensembles?
Amy K. Smith et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2016)
Polyphosphate: A Conserved Modifier of Amyloidogenic Processes
Claudia M. Cremers et al.
MOLECULAR CELL (2016)
Phosphorylation of C-terminal tyrosine residue 526 in FUS impairs its nuclear import
Simona Darovic et al.
JOURNAL OF CELL SCIENCE (2015)
Water Dispersion Interactions Strongly Influence Simulated Structural Properties of Disordered Protein States
Stefano Piana et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2015)
Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II
Kathleen A. Burke et al.
MOLECULAR CELL (2015)
Conformational Distribution and α-Helix to β-Sheet Transition of Human Amylin Fragment Dimer
Ruxi Qi et al.
BIOMACROMOLECULES (2014)
Structural Insight into Tau Protein's Paradox of Intrinsically Disordered Behavior, Self-Acetylation Activity, and Aggregation
Yin Luo et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2014)
Cell-free Formation of RNA Granules: Bound RNAs Identify Features and Components of Cellular Assemblies
Tina W. Han et al.
CELL (2012)
Structural, thermodynamical, and dynamical properties of oligomers formed by the amyloid NNQQ peptide: Insights from coarse-grained simulations
Yan Lu et al.
JOURNAL OF CHEMICAL PHYSICS (2012)
Carbon Nanotube Inhibits the Formation of β-Sheet-Rich Oligomers of the Alzheimer's Amyloid-β(16-22) Peptide
Huiyu Li et al.
BIOPHYSICAL JOURNAL (2011)
SHIFTX2: significantly improved protein chemical shift prediction
Beomsoo Han et al.
JOURNAL OF BIOMOLECULAR NMR (2011)
Replica Exchange with Solute Scaling: A More Efficient Version of Replica Exchange with Solute Tempering (REST2)
Lingle Wang et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2011)
Sequence-Specific Random Coil Chemical Shifts of Intrinsically Disordered Proteins
Kamil Tamiola et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
Structural diversity of dimers of the Alzheimer amyloid-beta(25-35) peptide and polymorphism of the resulting fibrils
Guanghong Wei et al.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2010)
Improved side-chain torsion potentials for the Amber ff99SB protein force field
Kresten Lindorff-Larsen et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)
Canonical sampling through velocity rescaling
Giovanni Bussi et al.
JOURNAL OF CHEMICAL PHYSICS (2007)
Impact of the mutation A21G (Flemish variant) on Alzheimer's β-amyloid dimers by molecular dynamics simulations
Alexis Huet et al.
BIOPHYSICAL JOURNAL (2006)
Replica exchange with solute tempering: A method for sampling biological systems in explicit water
P Liu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Share Paper
