Journal
JOURNAL OF COMPUTATIONAL CHEMISTRY
Volume 37, Issue 22, Pages 2098-2105Publisher
WILEY
DOI: 10.1002/jcc.24428
Keywords
carbohydrate; polysaccharide conformation; C; Albicans; 3D model; Shigella flexneri
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Funding
- South African Medical Research Council
- Swedish Research Council
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CarbBuilder is a portable software tool for producing three-dimensional molecular models of carbohydrates from the simple text specification of a primary structure. CarbBuilder can generate a wide variety of carbohydrate structures, ranging from monosaccharides to large, branched polysaccharides. Version 2.0 of the software, described in this article, supports monosaccharides of both mammalian and bacterial origin and a range of substituents for derivatization of individual sugar residues. This improved version has a sophisticated building algorithm to explore the range of possible conformations for a specified carbohydrate molecule. Illustrative examples of models of complex polysaccharides produced by CarbBuilder demonstrate the capabilities of the software. CarbBuilder is freely available under the Artistic License 2.0 from . (c) 2016 Wiley Periodicals, Inc.
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