Journal
BIOINFORMATICS
Volume 38, Issue 15, Pages 3844-3846Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btac409
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Funding
- Aligning Science Across Parkinson's through Michael J. Fox Foundation for Parkinson's Research (MJFF) [ASAP-000478, ASAP-000509]
- BrightFocus Foundation [A2021009F]
- Tenure Track Clinician Scientist Fellowship [MR/N008324/1]
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ggtranscript is a fast and flexible tool for visualizing and comparing transcripts, inheriting the functionality and familiarity of ggplot2 for easy use.
Motivation: The advent of long-read sequencing technologies has increased demand for the visualization and interpretation of transcripts. However, tools that perform such visualizations remain inflexible and lack the ability to easily identify differences between transcript structures. Here, we introduce ggtranscript, an R package that provides a fast and flexible method to visualize and compare transcripts. As a ggplot2 extension, ggtranscript inherits the functionality and familiarity of ggplot2 making it easy to use.
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