Journal
BIOINFORMATICS
Volume 38, Issue 19, Pages 4654-4655Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btac549
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Funding
- National Natural Science Foundation of China [61871411, 61901003]
- University Synergy Innovation Program of Anhui Province [GXXT-2021-001]
- Sci-Tech Innovation 2030 Agenda [2022ZD0205200]
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Recent whole-brain mapping projects are collecting larger sets of high-resolution brain images using various techniques. Reliable cross-modal registration tools are needed for data mining and analysis. mBrainAligner-Web is a user-friendly web server that allows configuration and execution of mBrainAligner locally or remotely across platforms.
Recent whole-brain mapping projects are collecting increasingly larger sets of high-resolution brain images using a variety of imaging, labeling and sample preparation techniques. Both mining and analysis of these data require reliable and robust cross-modal registration tools. We recently developed the mBrainAligner, a pipeline for performing cross-modal registration of the whole mouse brain. However, using this tool requires scripting or command-line skills to assemble and configure the different modules of mBrainAligner for accommodating different registration requirements and platform settings. In this application note, we present mBrainAligner-Web, a web server with a user-friendly interface that allows to configure and run mBrainAligner locally or remotely across platforms.
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