Related references
Note: Only part of the references are listed.Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0
Francesco Asnicar et al.
NATURE COMMUNICATIONS (2020)
Oceaniradius stylonematis gen. nov., sp. nov., isolated from a red alga, Stylonema cornu-cervi
Sang Eun Jeong et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2019)
Rhodophyticola porphyridii gen. nov., sp. nov., isolated from a red alga, Porphyridium marinum
Hye Su Jung et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2019)
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
Jan P. Meier-Kolthoff et al.
NATURE COMMUNICATIONS (2019)
Hwanghaeella grinnelliae gen. nov., sp. nov., isolated from a marine red alga
Jungeun Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2019)
Oceanibium sediminis gen. nov., sp. nov., isolated from marine sediment
Ya-Qi Chang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2019)
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
Jaime Huerta-Cepas et al.
NUCLEIC ACIDS RESEARCH (2019)
Aquicoccus porphyridii gen. nov., sp nov., isolated from a small marine red alga, Porphyridium marinum
Tingye Feng et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2018)
Phylogenomic analyses of a clade within the roseobacter group suggest taxonomic reassignments of species of the genera Aestuariivita, Citreicella, Loktanella, Nautella, Pelagibaca, Ruegeria, Thalassobius, Thiobacimonas and Tropicibacter, and the proposal of six novel genera
Joseph S. Wirth et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2018)
Monaibacterium marinum, gen. nov, sp nov, a new member of the Alphaproteobacteria isolated from seawater of Menai Straits, Wales, UK
Tatyana N. Chernikova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
Parasphingopyxis algicola sp nov., isolated from a marine red alga Asparagopsis taxiformis and emended description of the genus Parasphingopyxis Uchida et al. 2012
Sang Eun Jeong et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
Seok-Hwan Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
ModelFinder: fast model selection for accurate phylogenetic estimates
Subha Kalyaanamoorthy et al.
NATURE METHODS (2017)
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
NCBI prokaryotic genome annotation pipeline
Tatiana Tatusova et al.
NUCLEIC ACIDS RESEARCH (2016)
Pontivivens insulae gen. nov., sp nov., isolated from seawater
Sooyeon Park et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Halovulum dunhuangense gen. nov., sp nov., isolated from a saline terrestrial spring
Fengqin Sun et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Sulfitobacter porphyrae sp nov., isolated from the red alga Porphyra yezoensis
Youhei Fukui et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences
Chengwei Luo et al.
NUCLEIC ACIDS RESEARCH (2014)
Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using Aeromonas as a Test Case
Sophie M. Colston et al.
MBIO (2014)
Algimonas porphyrae gen. nov., sp nov., a member of the family Hyphomonadaceae, isolated from the red alga Porphyra yezoensis
Youhei Fukui et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Algimonas ampicilliniresistens sp nov., isolated from the red alga Porphyra yezoensis, and emended description of the genus Algimonas
Youhei Fukui et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
Chen-Shan Chin et al.
NATURE METHODS (2013)
Diversity and Abundance of the Bacterial Community of the Red Macroalga Porphyra umbilicalis: Did Bacterial Farmers Produce Macroalgae?
Lilibeth N. Miranda et al.
PLOS ONE (2013)
Maritalea porphyrae sp nov., isolated from a red alga (Porphyra yezoensis), and transfer of Zhangella mobilis to Maritalea mobilis comb. nov.
Youhei Fukui et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Fredrik Ronquist et al.
SYSTEMATIC BIOLOGY (2012)
Shifting the genomic gold standard for the prokaryotic species definition
Michael Richter et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Mesonia mobilis sp nov., isolated from seawater, and emended description of the genus Mesonia
Olga I. Nedashkovskaya et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Share Paper
