Journal
ACS OMEGA
Volume 7, Issue 14, Pages 12186-12192Publisher
AMER CHEMICAL SOC
DOI: 10.1021/acsomega.2c00566
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Funding
- SCHOONER cluster of the University of Oklahoma, XSEDE [MCB160005]
- TACC [MCB20016]
- National Institutes of Health [GM120634, GM120578]
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Overexpression of SAA can lead to amyloidosis. Using Replica Exchange with Tunneling, the conversion of SAA(1-76) chain was studied, finding the crucial role of salt bridge 26E-34K in fibril formation.
Overexpression of serum amyloid A (SAA) can lead to a form of amyloidosis where the fibrils are made of SAA fragments, most often SAA(1-76). Using Replica Exchange with Tunneling, we study the conversion of a SAA(1-76) chain between the folded conformation and a fibril conformation. We find that the basins in the free energy landscape corresponding to the two motifs are separated by barriers of only about 2-3 k(B)T. Crucial for the assembly into the fibril structure is the salt bridge 26E-34K that provides a scaffold for forming the fibril conformation.
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