Related references
Note: Only part of the references are listed.In vitro production and multiplex quantification of 2′,3′-cyclic phosphate-containing 5′-tRNA half molecules
Takuya Kawamura et al.
METHODS (2022)
A high-throughput screening method for evolving a demethylase enzyme with improved and new functionalities
Yuru Wang et al.
NUCLEIC ACIDS RESEARCH (2021)
Emerging Functions for snoRNAs and snoRNA-Derived Fragments
Maliha Wajahat et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
cyPhyRNA-seq: a genome-scale RNA-seq method to detect active self-cleaving ribozymes by capturing RNAs with 2 ',3 ' cyclic phosphates and 5 ' hydroxyl ends
V. Janett Olzog et al.
RNA BIOLOGY (2021)
PANDORA-seq expands the repertoire of regulatory small RNAs by overcoming RNA modifications
Junchao Shi et al.
NATURE CELL BIOLOGY (2021)
CPA-seq reveals small ncRNAs with methylated nucleosides and diverse termini
Heming Wang et al.
CELL DISCOVERY (2021)
RNase κ promotes robust piRNA production by generating 2′,3′-cyclic phosphate-containing precursors
Megumi Shigematsu et al.
NATURE COMMUNICATIONS (2021)
Small RNA-Sequencing: Approaches and Considerations for miRNA Analysis
Sarka Benesova et al.
DIAGNOSTICS (2021)
tRNA-derived fragments: Mechanisms underlying their regulation of gene expression and potential applications as therapeutic targets in cancers and virus infections
Xiuchong Yu et al.
THERANOSTICS (2021)
Ribosomal RNA fragmentation into short RNAs (rRFs) is modulated in a sex- and population of origin-specific manner
Tess Cherlin et al.
BMC BIOLOGY (2020)
Oxidative stress enhances the expression of 2′,3′-cyclic phosphate-containing RNAs
Megumi Shigematsu et al.
RNA BIOLOGY (2020)
On the expanding roles of tRNA fragments in modulating cell behavior
Rogan Magee et al.
NUCLEIC ACIDS RESEARCH (2020)
Infection-induced 5′-half molecules of tRNAHisGUG activate Toll-like receptor 7
Kamlesh Pawar et al.
PLOS BIOLOGY (2020)
Phospho-RNA-seq: a modified small RNA-seq method that reveals circulating mRNA and lncRNA fragments as potential biomarkers in human plasma
Maria D. Giraldez et al.
EMBO JOURNAL (2019)
Genome-wide identification of short 2′,3′-cyclic phosphate-containing RNAs and their regulation in aging
Megumi Shigematsu et al.
PLOS GENETICS (2019)
PIWI-interacting RNAs: small RNAs with big functions
Deniz M. Ozata et al.
NATURE REVIEWS GENETICS (2019)
COSMIC: the Catalogue Of Somatic Mutations In Cancer
John G. Tate et al.
NUCLEIC ACIDS RESEARCH (2019)
A tRNA half modulates translation as stress response in Trypanosoma brucei
Roger Fricker et al.
NATURE COMMUNICATIONS (2019)
Small Non-Coding RNAs Derived from Eukaryotic Ribosomal RNA
Marine Lambert et al.
NON-CODING RNA (2019)
Systematic comparison of small RNA library preparation protocols for next-generation sequencing
Cloelia Dard-Dascot et al.
BMC GENOMICS (2018)
Direct quantification of 3′ terminal 2′-O-methylation of small RNAs by RT-qPCR
Nan Wang et al.
RNA (2018)
piRNA-Guided Genome Defense: From Biogenesis to Silencing
Benjamin Czech et al.
ANNUAL REVIEW OF GENETICS, VOL 52 (2018)
Decreasing miRNA sequencing bias using a single adapter and circularization approach
Sergio Barberan-Soler et al.
GENOME BIOLOGY (2018)
The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells
Shozo Honda et al.
NUCLEIC ACIDS RESEARCH (2017)
Small RNA fragments derived from multiple RNA classes - the missing element of multi-omics characteristics of the hepatitis C virus cell culture model
Paulina Jackowiak et al.
BMC GENOMICS (2017)
Identification and Functional Analysis of the Pre-piRNA 3′ Trimmer in Silkworms
Natsuko Izumi et al.
CELL (2016)
Selective amplification and sequencing of cyclic phosphate-containing RNAs by the cP-RNA-seq method
Shozo Honda et al.
NATURE PROTOCOLS (2016)
Biogenesis and Function of Transfer RNA-Related Fragments (tRFs)
Pankaj Kumar et al.
TRENDS IN BIOCHEMICAL SCIENCES (2016)
Efficient and quantitative high-throughput tRNA sequencing
Guanqun Zheng et al.
NATURE METHODS (2015)
ARM-seq: AlkB-facilitated RNA methylation sequencing reveals a complex landscape of modified tRNA fragments
Aaron E. Cozen et al.
NATURE METHODS (2015)
NON-CODING RNA Towards a molecular understanding of microRNA-mediated gene silencing
Stefanie Jonas et al.
NATURE REVIEWS GENETICS (2015)
The expanding world of small RNAs in plants
Filipe Borges et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2015)
Global analysis of RNA cleavage by 5'-hydroxyl RNA sequencing
Sally E. Peach et al.
NUCLEIC ACIDS RESEARCH (2015)
Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers
Shozo Honda et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
A deeply conserved, noncanonical miRNA hosted by ribosomal DNA
Li-Ling Chak et al.
RNA (2015)
Discovery and Characterization of piRNAs in the Human Fetal Ovary
Zev Williams et al.
CELL REPORTS (2015)
Ancient and Novel Small RNA Pathways Compensate for the Loss of piRNAs in Multiple Independent Nematode Lineages
Peter Sarkies et al.
PLOS BIOLOGY (2015)
ARGONAUTE 6 bridges transposable element mRNA-derived siRNAs to the establishment of DNA methylation
Andrea D. McCue et al.
EMBO JOURNAL (2015)
Endogenous siRNAs: regulators of internal affairs
Monica J. Piatek et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2014)
tRNA fragments in human health and disease
Paul Anderson et al.
FEBS LETTERS (2014)
An mRNA-Derived Noncoding RNA Targets and Regulates the Ribosome
Andreas Pircher et al.
MOLECULAR CELL (2014)
Regulation of microRNA biogenesis
Minju Ha et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2014)
Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
Leandro Castellano et al.
NUCLEIC ACIDS RESEARCH (2013)
Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal
Jianjiong Gao et al.
SCIENCE SIGNALING (2013)
Regulation of small RNA stability: methylation and beyond
Lijuan Ji et al.
CELL RESEARCH (2012)
Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Hiroshi Nishimasu et al.
NATURE (2012)
The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis
Jonathan J. Ipsaro et al.
NATURE (2012)
Extensive terminal and asymmetric processing of small RNAs from rRNAs, snoRNAs, snRNAs, and tRNAs
Zhihua Li et al.
NUCLEIC ACIDS RESEARCH (2012)
The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data
Ethan Cerami et al.
CANCER DISCOVERY (2012)
Angiogenin-Induced tRNA Fragments Inhibit Translation Initiation
Pavel Ivanov et al.
MOLECULAR CELL (2011)
Deep-sequencing of human argonaute-associated small RNAs provides insight into miRNA sorting and reveals argonaute association with RNA fragments of diverse origin
Alexander Maxwell Burroughs et al.
RNA BIOLOGY (2011)
Angiogenin-induced tRNA-derived Stress-induced RNAs Promote Stress-induced Stress Granule Assembly
Mohamed M. Emara et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Capture and sequence analysis of RNAs with terminal 2′,3′-cyclic phosphates
Kevin Schutz et al.
RNA (2010)
Optimization of enzymatic reaction conditions for generating representative pools of cDNA from small RNA
Daniela B. Munafo et al.
RNA (2010)
Human tRNA-derived small RNAs in the global regulation of RNA silencing
Dirk Haussecker et al.
RNA (2010)
MicroRNAs: Target Recognition and Regulatory Functions
David P. Bartel
CELL (2009)
Stress induces tRNA cleavage by angiogenin in mammalian cells
Hanjiang Fu et al.
FEBS LETTERS (2009)
Angiogenin cleaves tRNA and promotes stress-induced translational repression
Satoshi Yamasaki et al.
JOURNAL OF CELL BIOLOGY (2009)
Small silencing RNAs: an expanding universe
Megha Ghildiyal et al.
NATURE REVIEWS GENETICS (2009)
Biogenesis of small RNAs in animals
V. Narry Kim et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2009)
Small RNAs derived from snoRNAs
Ryan J. Taft et al.
RNA (2009)
A Human snoRNA with MicroRNA-Like Functions
Christine Ender et al.
MOLECULAR CELL (2008)
The mouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs
Yohei Kirino et al.
RNA (2007)
The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC
Michael D. Horwich et al.
CURRENT BIOLOGY (2007)
Pimet, the Drosophila homolog of HEN1, mediates 2′-O-methylation of PIWI-interacting RNAs at their 3′ ends
Kuniaki Saito et al.
GENES & DEVELOPMENT (2007)
Mouse Piwi-interacting RNAs are 2′-O-methylated at their 3′ termini
Yohei Kirino et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)
The 3′ termini of mouse Piwi-interacting RNAs are 2′-O-methylated
Tomoya Ohara et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
Julius Brennecke et al.
CELL (2007)
A slicer-mediated mechanism for repeat-associated siRNA 5′ end formation in Drosophila
Lalith S. Gunawardane et al.
SCIENCE (2007)
Ribonuclease revisited: structural insights into ribonuclease III family enzymes
Ian J. MacRae et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2007)
Repression of protein synthesis by miRNAs: how many mechanisms?
Ramesh S. Pillai et al.
TRENDS IN CELL BIOLOGY (2007)
Approaches to microRNA discovery
Eugene Berezikov et al.
NATURE GENETICS (2006)
HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2 ' OH of the 3 ' terminal nucleotide
ZY Yang et al.
NUCLEIC ACIDS RESEARCH (2006)
MicroRNA biogenesis: Coordinated cropping and dicing
VN Kim
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2005)
Methylation as a crucial step in plant microRNA biogenesis
B Yu et al.
SCIENCE (2005)
MicroRNAs: Genomics, biogenesis, mechanism, and function
DP Bartel
CELL (2004)
Share Paper
