Related references
Note: Only part of the references are listed.Genome Analysis and Genomic Comparison of the Novel SpeciesArthrobacter ipsiReveal Its Potential Protective Role in Its Bark Beetle Host
Lihuen Irai Gonzalez-Dominici et al.
MICROBIAL ECOLOGY (2021)
BiG-SLiCE: A highly scalable tool maps the diversity of 1.2 million biosynthetic gene clusters
Satria A. Kautsar et al.
GIGASCIENCE (2021)
A New Perspective of Pseudomonas-Host Interactions: Distribution and Potential Ecological Functions of the Genus Pseudomonas within the Bark Beetle Holobiont
Zaki Saati-Santamaria et al.
BIOLOGY-BASEL (2021)
Phylogenetic analysis of the salinipostin γ-butyrolactone gene cluster uncovers new potential for bacterial signalling-molecule diversity
Kaitlin E. Creamer et al.
Microbial Genomics (2021)
Extraction, purification and characterization of phenazine from Pseudomonas aeruginosa isolate of wastewater sources: a panacea towards clinical pathogens
Aswin Thacharodi et al.
APPLIED NANOSCIENCE (2021)
A computational framework to explore large-scale biosynthetic diversity
Jorge C. Navarro-Munoz et al.
NATURE CHEMICAL BIOLOGY (2020)
MIBiG 2.0: a repository for biosynthetic gene clusters of known function
Satria A. Kautsar et al.
NUCLEIC ACIDS RESEARCH (2020)
The environmental occurrence of Pseudomonas aeruginosa
Stephanie Crone et al.
APMIS (2020)
Palantir: a springboard for the analysis of secondary metabolite gene clusters in large-scale genome mining projects
Loic Meunier et al.
BIOINFORMATICS (2020)
Genome Mining as New Challenge in Natural Products Discovery
Luisa Albarano et al.
MARINE DRUGS (2020)
Comparative Genomics and Metabolomics in the Genus Nocardia
Daniel Maennle et al.
MSYSTEMS (2020)
Bacteria as genetically programmable producers of bioactive natural products
Joachim J. Hug et al.
NATURE REVIEWS CHEMISTRY (2020)
Bacteria Belonging toPseudomonas typographisp. nov. from the Bark BeetleIps typographusHave Genomic Potential to Aid in the Host Ecology
Ezequiel Peral-Aranega et al.
INSECTS (2020)
Macrel: antimicrobial peptide screening in genomes and metagenomes
Celio Dias Santos-Junior et al.
PEERJ (2020)
Selection of the Root Endophyte Pseudomonas brassicacearum CDVBN10 as Plant Growth Promoter for Brassica napus L. Crops
Alejandro Jimenez-Gomez et al.
AGRONOMY-BASEL (2020)
Norine: update of the nonribosomal peptide resource
Areski Flissi et al.
NUCLEIC ACIDS RESEARCH (2020)
Unraveling the hidden universe of small proteins in bacterial genomes
Samuel Miravet-Verde et al.
MOLECULAR SYSTEMS BIOLOGY (2019)
The antimicrobial potential of Streptomyces from insect microbiomes
Marc G. Chevrette et al.
NATURE COMMUNICATIONS (2019)
Phenazine production promotes antibiotic tolerance and metabolic heterogeneity in Pseudomonas aeruginosa biofilms
Konstanze T. Schiessl et al.
NATURE COMMUNICATIONS (2019)
Diversified secondary metabolite biosynthesis gene repertoire revealed in symbiotic dinoflagellates
Girish Beedessee et al.
SCIENTIFIC REPORTS (2019)
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2019)
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
Kai Blin et al.
NUCLEIC ACIDS RESEARCH (2019)
BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs
Dmitry Meleshko et al.
GENOME RESEARCH (2019)
EvoMining reveals the origin and fate of natural product biosynthetic enzymes
Nelly Selem-Mojica et al.
MICROBIAL GENOMICS (2019)
Survey of Biosynthetic Gene Clusters from Sequenced Myxobacteria Reveals Unexplored Biosynthetic Potential
Katherine Gregory et al.
MICROORGANISMS (2019)
DRAMP 2.0, an updated data repository of antimicrobial peptides
Xinyue Kang et al.
SCIENTIFIC DATA (2019)
The EFI Web Resource for Genomic Enzymology Tools: Leveraging Protein, Genome, and Metagenome Databases to Discover Novel Enzymes and Metabolic Pathways
Remi Zallot et al.
BIOCHEMISTRY (2019)
Evolution and Diversity of Assembly-Line Polyketide Synthases
Aleksandra Nivina et al.
CHEMICAL REVIEWS (2019)
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
Jaime Huerta-Cepas et al.
NUCLEIC ACIDS RESEARCH (2019)
Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species
Martina Adamek et al.
BMC GENOMICS (2018)
Functions and emerging applications of bacteriocins
Michael L. Chikindas et al.
CURRENT OPINION IN BIOTECHNOLOGY (2018)
UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction
Seong-In Na et al.
JOURNAL OF MICROBIOLOGY (2018)
Correlating chemical diversity with taxonomic distance for discovery of natural products in myxobacteria
Thomas Hoffmann et al.
NATURE COMMUNICATIONS (2018)
Discovery of Phloeophagus Beetles as a Source of Pseudomonas Strains That Produce Potentially New Bioactive Substances and Description of Pseudomonas bohemica sp nov.
Zaki Saati-Santamaria et al.
FRONTIERS IN MICROBIOLOGY (2018)
Phylogeny-guided (meta)genome mining approach for the targeted discovery of new microbial natural products
Hahk-Soo Kang
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2017)
Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides
Don D. Nguyen et al.
NATURE MICROBIOLOGY (2017)
Phylogenomics of 2,4-Diacetylphloroglucinol-Producing Pseudomonas and Novel Antiglycation Endophytes from Piper auritum
Karina Gutierrez-Garcia et al.
JOURNAL OF NATURAL PRODUCTS (2017)
CRISPR-Cas9 strategy for activation of silent Streptomyces biosynthetic gene clusters
Mingzi M. Zhang et al.
NATURE CHEMICAL BIOLOGY (2017)
Distribution of 2,4-Diacetylphloroglucinol Biosynthetic Genes among the Pseudomonas spp. Reveals Unexpected Polyphyletism
Juliana Almario et al.
FRONTIERS IN MICROBIOLOGY (2017)
APD3: the antimicrobial peptide database as a tool for research and education
Guangshun Wang et al.
NUCLEIC ACIDS RESEARCH (2016)
Phylogenomic Analysis of Natural Products Biosynthetic Gene Clusters Allows Discovery of Arseno-Organic Metabolites in Model Streptomycetes
Pablo Cruz-Morales et al.
GENOME BIOLOGY AND EVOLUTION (2016)
Antibiotic drug discovery
Wolfgang Wohlleben et al.
MICROBIAL BIOTECHNOLOGY (2016)
Microreact: visualizing and sharing data for genomic epidemiology and phylogeography
Silvia Argimon et al.
MICROBIAL GENOMICS (2016)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
Minimum Information about a Biosynthetic Gene cluster
Marnix H. Medema et al.
NATURE CHEMICAL BIOLOGY (2015)
Strain-Level Diversity of Secondary Metabolism in Streptomyces albus
Ryan F. Seipke
PLOS ONE (2015)
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
Nikos C. Kyrpides et al.
PLOS BIOLOGY (2014)
QUAST: quality assessment tool for genome assemblies
Alexey Gurevich et al.
BIOINFORMATICS (2013)
Identification of Orfamide A as an Insecticidal Metabolite Produced by Pseudomonas protegens F6
Ja Yeong Jang et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2013)
Bacteriocins - a viable alternative to antibiotics?
Paul D. Cotter et al.
NATURE REVIEWS MICROBIOLOGY (2013)
The Antimicrobial Compound Xantholysin Defines a New Group of Pseudomonas Cyclic Lipopeptides
Wen Li et al.
PLOS ONE (2013)
Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions
Joyce E. Loper et al.
PLOS GENETICS (2012)
Proteinortho: Detection of (Co-)orthologs in large-scale analysis
Marcus Lechner et al.
BMC BIOINFORMATICS (2011)
ggplot2
Hadley Wickham
WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL STATISTICS (2011)
Association of Hemolytic Activity of Pseudomonas entomophila, a Versatile Soil Bacterium, with Cyclic Lipopeptide Production
Isabelle Vallet-Gely et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Genomics of secondary metabolite production by Pseudomonas spp
Harald Gross et al.
NATURAL PRODUCT REPORTS (2009)
The RAST server: Rapid annotations using subsystems technology
Ramy K. Aziz et al.
BMC GENOMICS (2008)
Dendroscope: An interactive viewer for large phylogenetic trees
Daniel H. Huson et al.
BMC BIOINFORMATICS (2007)
Share Paper
