4.3 Article

Construction and Validation of Angiogenesis-Related Prognostic Risk Signature to Facilitate Survival Prediction and Biomarker Excavation of Breast Cancer Patients

Related references

Note: Only part of the references are listed.
Review Oncology

A state-of-the-art review of stratified medicine in cancer: towards a future precision medicine strategy in cancer

G. Middleton et al.

Summary: Based on the results from several platform studies, it has been concluded that genotype-matched therapy is effective for cancer patients, but there are still challenges in combination therapy. Precision medicine holds great promise in cancer treatment, but more accurate models are needed to capture the genomic complexity of human diseases.

ANNALS OF ONCOLOGY (2022)

Article Biochemical Research Methods

ImmuCellAI-mouse: a tool for comprehensive prediction of mouse immune cell abundance and immune microenvironment depiction

Ya-Ru Miao et al.

Summary: ImmuCellAI-mouse is an accurate tool for predicting mouse immune cell abundance, utilizing gene expression data and a hierarchical strategy to accurately predict most immune cell types, revealing dynamic changes in immune cell infiltration in a mouse tumor dataset.

BIOINFORMATICS (2022)

Article Oncology

Cancer Statistics, 2021

Rebecca L. Siegel et al.

Summary: Every year, the American Cancer Society projects the numbers of new cancer cases and deaths in the United States, with the latest data showing a significant decline in lung cancer mortality, while prostate cancer mortality has plateaued and breast and colorectal cancer mortality have slowed. Improvements in treatment have accelerated progress against lung cancer, leading to a record drop in overall cancer mortality.

CA-A CANCER JOURNAL FOR CLINICIANS (2021)

Article Cell Biology

Di-methylation of CD147-K234 Promotes the Progression of NSCLC by Enhancing Lactate Export

Ke Wang et al.

Summary: CD147, methylated to CD147-K234me2 by KMT5A, plays a critical role in cancer metabolism by enhancing glycolysis and lactate export in NSCLC cells. High CD147-K234me2 expression is significantly related to cancer progression and overall survival in NSCLC patients, especially those in early stages, suggesting it as a promising therapeutic target.

CELL METABOLISM (2021)

Article Biochemistry & Molecular Biology

The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets

Damian Szklarczyk et al.

Summary: The STRING database integrates various associations between proteins, including physical interactions and functional associations, by collecting evidence from sources such as literature, databases, computational predictions, and systematic transfers. STRING aims for wide coverage and provides extensive user interface features and querying methods for experimental data.

NUCLEIC ACIDS RESEARCH (2021)

Article Multidisciplinary Sciences

Sarcoma classification by DNA methylation profiling

Christian Koelsche et al.

Summary: Sarcomas are malignant soft tissue and bone tumors that are morphologically heterogeneous, making classification challenging. Researchers developed a classifier using DNA methylation data, potentially improving classification for research and clinical purposes.

NATURE COMMUNICATIONS (2021)

Review Pharmacology & Pharmacy

Angiopoietin inhibitors: A review on targeting tumor angiogenesis

Digna Parmar et al.

Summary: Angiogenesis is crucial for providing oxygen and nutrients to cells, but its imbalance can lead to pathological conditions. Tumor growth relies on angiogenesis for sustenance. Angiopoietins as alternative targets for anti-angiogenic therapy show promise, especially in combination with VEGF inhibitors.

EUROPEAN JOURNAL OF PHARMACOLOGY (2021)

Article Biotechnology & Applied Microbiology

A New Survival Model Based on Cholesterol Biosynthesis-Related Genes for Prognostic Prediction in Clear Cell Renal Cell Carcinoma

Xiaochen Qi et al.

Summary: This study identified 9 CBRGs associated with the prognosis of patients with renal clear cell carcinoma, and established a new survival model that can predict prognosis more accurately.

BIOMED RESEARCH INTERNATIONAL (2021)

Article Oncology

DNA methylation based glioblastoma subclassification is related to tumoral T-cell infiltration and patient survival

Joost Dejaegher et al.

Summary: This study evaluated the relationship of epigenetic GBM subgroups with immune cell infiltrations, systemic immune changes during radiochemotherapy, and clinical outcomes. Differences were found in T-cell infiltration and survival among different subgroups, with DNA methylation profiles being potentially useful in stratifying patients for immunotherapy trials.

NEURO-ONCOLOGY (2021)

Article Oncology

Precision Medicine and Targeted Therapies in Breast Cancer

Ian Greenwalt et al.

SURGICAL ONCOLOGY CLINICS OF NORTH AMERICA (2020)

Review Oncology

Review of precision cancer medicine: Evolution of the treatment paradigm

Apostolia M. Tsimberidou et al.

CANCER TREATMENT REVIEWS (2020)

Article Biochemistry & Molecular Biology

Interleukin-6 and interleukin-8 serum levels in prognosis of hormone-dependent breast cancer

Jelena Milovanovic et al.

CYTOKINE (2019)

Article Biochemistry & Molecular Biology

GEPIA2: an enhanced web server for large-scale expression profiling and interactive analysis

Zefang Tang et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Biotechnology & Applied Microbiology

BTG1 low expression in pancreatic ductal adenocarcinoma is associated with a poorer prognosis

Yufang Huang et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MARKERS (2018)

Article Biochemistry & Molecular Biology

GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses

Zefang Tang et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Multidisciplinary Sciences

A subcellular map of the human proteome

Peter J. Thul et al.

SCIENCE (2017)

Article Multidisciplinary Sciences

A pathology atlas of the human cancer transcriptome

Mathias Uhlen et al.

SCIENCE (2017)

Article Biotechnology & Applied Microbiology

Comprehensive analyses of tumor immunity: implications for cancer immunotherapy

Bo Li et al.

GENOME BIOLOGY (2016)

Article Multidisciplinary Sciences

Tissue-based map of the human proteome

Mathias Uhlen et al.

SCIENCE (2015)

Review Oncology

Personalised cancer medicine

Sarah E. Jackson et al.

INTERNATIONAL JOURNAL OF CANCER (2015)

Article Oncology

Rapamycin and PF4 Induce Apoptosis by Upregulating Bax and Down-Regulating Survivin in MNU-Induced Breast Cancer

Tengku Ahmad Damitri Al-Astani Tengku Din et al.

ASIAN PACIFIC JOURNAL OF CANCER PREVENTION (2014)

Article Biochemistry & Molecular Biology

The long non-coding RNA H19-derived miR-675 modulates human gastric cancer cell proliferation by targeting tumor suppressor RUNX1

Ming Zhuang et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2014)

Article Multidisciplinary Sciences

Expression of RUNX1 Correlates with Poor Patient Prognosis in Triple Negative Breast Cancer

Nicola Ferrari et al.

PLOS ONE (2014)

Article Oncology

Angiogenesis Markers in Breast Cancer - Potentially Useful Tools for Priority Setting of Anti-Angiogenic Agents

Elahe Keyhani et al.

ASIAN PACIFIC JOURNAL OF CANCER PREVENTION (2013)

Article Biochemistry & Molecular Biology

The depletion of Interleukin-8 causes cell cycle arrest and increases the efficacy of docetaxel in breast cancer cells

Nan Shao et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2013)

Editorial Material Genetics & Heredity

The Cancer Genome Atlas Pan-Cancer analysis project

John N. Weinstein et al.

NATURE GENETICS (2013)

Review Biochemistry & Molecular Biology

Microenvironmental regulation of tumor progression and metastasis

Daniela F. Quail et al.

NATURE MEDICINE (2013)

Review Food Science & Technology

Modulation of angiogenesis by dietary phytoconstituents in the prevention and intervention of breast cancer

Sharon C. Reuben et al.

MOLECULAR NUTRITION & FOOD RESEARCH (2012)

Article Gastroenterology & Hepatology

Interleukin-8, a promising predictor for prognosis of pancreatic cancer

Ying Chen et al.

WORLD JOURNAL OF GASTROENTEROLOGY (2012)

Article Medicine, General & Internal

Association of BRCA1 and BRCA2 Mutations With Survival, Chemotherapy Sensitivity, and Gene Mutator Phenotype in Patients With Ovarian Cancer

Da Yang et al.

JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION (2011)

Article Multidisciplinary Sciences

Intersection of FOXO- and RUNX1-mediated gene expression programs in single breast epithelial cells during morphogenesis and tumor progression

Lixin Wang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Review Hematology

Interaction of PF4 (CXCL4) with the vasculature: A role in atherosclerosis and angiogenesis

Sallouha Aidoudi et al.

THROMBOSIS AND HAEMOSTASIS (2010)

Review Oncology

Breast cancer as a global health concern

Steven S. Coughlin et al.

CANCER EPIDEMIOLOGY (2009)

Article Oncology

An orthotopic endometrial cancer mouse model demonstrates a role for RUNX1 in distant metastasis

Andreas Doll et al.

INTERNATIONAL JOURNAL OF CANCER (2009)

Article Oncology

Ki67 Index, HER2 Status, and Prognosis of Patients With Luminal B Breast Cancer

Maggie C. U. Cheang et al.

JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2009)

Article Oncology

The Interleukin-8 Pathway in Cancer

David J. J. Waugh et al.

CLINICAL CANCER RESEARCH (2008)

Article Medicine, General & Internal

Race, breast cancer subtypes, and survival in the Carolina Breast Cancer Study

Lisa A. Carey et al.

JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION (2006)

Article Multidisciplinary Sciences

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

A Subramanian et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Multidisciplinary Sciences

Molecular portraits of human breast tumours

CM Perou et al.

NATURE (2000)