Related references
Note: Only part of the references are listed.A comparison of triploid and diploid Atlantic salmon (Salmo salar) performance and welfare under commercial farming conditions in Norway
Angelico Madaro et al.
JOURNAL OF APPLIED AQUACULTURE (2022)
Aspirin effects on platelet gene expression are associated with a paradoxical, increase in platelet function
Rachel A. Myers et al.
BRITISH JOURNAL OF CLINICAL PHARMACOLOGY (2022)
Vertebral deformities in interspecific diploid and triploid salmonid hybrids
Thomas W. K. Fraser et al.
JOURNAL OF FISH BIOLOGY (2021)
Polyploidy affects fillet yield, composition, and fatty acid profile in two-year old, female rainbow trout, Oncorhynchus mykiss
Jeremy L. Everson et al.
AQUACULTURE (2021)
Integrated analysis of the responses of a circRNA-miRNA-mRNA ceRNA network to heat stress in rainbow trout (Oncorhynchus mykiss) liver
Jinqiang Quan et al.
BMC GENOMICS (2021)
Transcriptome analysis provides the first insight into the molecular basis of temperature plasticity in Banggai cardinalfish, Pterapogon kauderni
Yu Pan et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2021)
Acclimation to warm temperatures has important implications for mitochondrial function in Atlantic salmon (Salmo salar)
Lucie Gerber et al.
JOURNAL OF EXPERIMENTAL BIOLOGY (2021)
DNA Methylation Dynamics in Atlantic Salmon (Salmo salar) Challenged With High Temperature and Moderate Hypoxia
Anne Beemelmanns et al.
FRONTIERS IN MARINE SCIENCE (2021)
Snow crab (Chionoecetes opilio) hepatopancreas transcriptome: Identification and testing of candidate molecular biomarkers of seismic survey impact
Jennifer R. Hall et al.
FISHERIES RESEARCH (2021)
The effect of acute heat stress on the innate immune function of rainbow trout based on the transcriptome
Chang-Qing Zhou et al.
JOURNAL OF THERMAL BIOLOGY (2021)
Effects of ploidy and salmonid alphavirus infection on the skin and gill microbiome of Atlantic salmon (Salmo salar)
Ryan Brown et al.
PLOS ONE (2021)
The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
Anne Beemelmanns et al.
BMC GENOMICS (2021)
Comparative transcriptomic analysis brings new insights into the response to acute temperature acclimation in burbot (Lota lota lota)
Tianyan Yang et al.
AQUACULTURE REPORTS (2021)
The Atlantic salmon's stress- and immune-related transcriptional responses to moderate hypoxia, an incremental temperature increase, and these challenges combined
Anne Beemelmanns et al.
G3-GENES GENOMES GENETICS (2021)
Incidence of skeletal deformities in induced triploid rainbow trout Oncorhynchus mykiss (Walbaum, 1792)
Krzysztof Jagiello et al.
OCEANOLOGICAL AND HYDROBIOLOGICAL STUDIES (2021)
Growth performance and nutrient utilization of growth hormone transgenic female triploid Atlantic salmon (Salmo salar) reared at three temperatures in a land-based freshwater recirculating aquaculture system (RAS)
Eric H. Ignatz et al.
AQUACULTURE (2020)
Impact of rearing temperature on the innate antiviral immune response of growth hormone transgenic female triploid Atlantic salmon (Salmo salar)
Eric H. Ignatz et al.
FISH & SHELLFISH IMMUNOLOGY (2020)
The Innate Immune Response of Atlantic Salmon (Salmo salar) Is Not Negatively Affected by High Temperature and Moderate Hypoxia
Fabio S. Zanuzzo et al.
FRONTIERS IN IMMUNOLOGY (2020)
Transcriptome sequencing and histology reveal dosage compensation in the liver of triploid pre-smolt Atlantic salmon
Derrick K. Odei et al.
SCIENTIFIC REPORTS (2020)
Improved mitochondrial function in salmon (Salmo salar) following high temperature acclimation suggests that there are cracks in the proverbial 'ceiling'
Lucie Gerber et al.
SCIENTIFIC REPORTS (2020)
Transcriptomic response to elevated water temperatures in adult migrating Yukon River Chinook salmon (Oncorhynchus tshawytscha)
Lizabeth Bowen et al.
CONSERVATION PHYSIOLOGY (2020)
Temperature-Dependent Fatty Acid Composition Change of Phospholipid in Steelhead Trout (Oncorhynchus mykiss) Tissues
Liu Chengyue et al.
JOURNAL OF OCEAN UNIVERSITY OF CHINA (2019)
RNA-seq reveals temporal differences in the transcriptome response to acute heat stress in the Atlantic salmon (Salmo salar)
Kun-Peng Shi et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2019)
GenPipes: an open-source framework for distributed and scalable genomic analyses
Mathieu Bourgey et al.
GIGASCIENCE (2019)
Understanding sequencing data as compositions: an outlook and review
Thomas P. Quinn et al.
BIOINFORMATICS (2018)
Negligible differences in metabolism and thermal tolerance between diploid and triploid Atlantic salmon (Salmo salar)
Alyssa J. Bowden et al.
JOURNAL OF EXPERIMENTAL BIOLOGY (2018)
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
Enis Afgan et al.
NUCLEIC ACIDS RESEARCH (2018)
Changes in water temperature and oxygen: the effect of triploidy on performance and metabolism in large farmed Atlantic salmon
Florian Sambraus et al.
AQUACULTURE ENVIRONMENT INTERACTIONS (2018)
Comparisons of reproductive function and fatty acid fillet quality between triploid and diploid farm Atlantic salmon (Salmo salar)
D. S. Murray et al.
ROYAL SOCIETY OPEN SCIENCE (2018)
Developing specific molecular biomarkers for thermal stress in salmonids
Arash Akbarzadeh et al.
BMC GENOMICS (2018)
Molecular Response to Extreme Summer Temperatures Differs Between Two Genetically Differentiated Populations of a Coral Reef Fish
Heather D. Veilleux et al.
FRONTIERS IN MARINE SCIENCE (2018)
The Role of Peroxiredoxin 6 in Cell Signaling
Jose A. Arevalo et al.
ANTIOXIDANTS (2018)
The dietary replacement of marine ingredients by terrestrial animal and plant alternatives modulates the antiviral immune response of Atlantic salmon (Salmo salar)
Albert Caballero-Solares et al.
FISH & SHELLFISH IMMUNOLOGY (2017)
Water temperature and dietary histidine affect cataract formation in Atlantic salmon (Salmo salar L.) diploid and triploid yearling smolt
F. Sambraus et al.
JOURNAL OF FISH DISEASES (2017)
A comparison of disease susceptibility and innate immune response between diploid and triploid Atlantic salmon (Salmo salar) siblings following experimental infection with Neoparamoeba perurans, causative agent of amoebic gill disease
Lynn Chalmers et al.
PARASITOLOGY (2017)
Triploid atlantic salmon (Salmo salar L.) post-smolts accumulate prevalence more slowly than diploid salmon following bath challenge with salmonid alphavirus subtype 3
Lindsey J. Moore et al.
PLOS ONE (2017)
Impact of Salmonid alphavirus infection in diploid and triploid Atlantic salmon (Salmo salar L.) fry
Tharangani K. Herath et al.
PLOS ONE (2017)
Recent progress in the research of cold-inducible RNA-binding protein
Peng Zhong et al.
FUTURE SCIENCE OA (2017)
Triploid Atlantic salmon shows similar performance, fatty acid composition and proteome response to diploids during early freshwater rearing
Waldo G. Nuez-Ortin et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2017)
Erythrocyte heat shock protein responses to chronic (in vivo) and acute (in vitro) temperature challenge in diploid and triploid salmonids
Pillai V. Saranyan et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY (2017)
Water temperature and oxygen: The effect of triploidy on performance and metabolism in farmed Atlantic salmon (Salmo salar L.) post-smolts
Florian Sambraus et al.
AQUACULTURE (2017)
Increased dietary phosphorous prevents vertebral deformities in triploid Atlantic salmon (Salmo salar L.)
P. G. Fjelldal et al.
AQUACULTURE NUTRITION (2016)
Effects of heat stress on respiratory burst, oxidative damage and SERPINH1 (HSP47) mRNA expression in rainbow trout Oncorhynchus mykiss
Yanni Wang et al.
FISH PHYSIOLOGY AND BIOCHEMISTRY (2016)
Effectiveness of triploidy as a management tool for reproductive containment of farmed fish: Atlantic salmon (Salmo salar) as a case study
Tillmann J. Benfey
REVIEWS IN AQUACULTURE (2016)
Dietary phosphorous and protein supplementation enhances seawater growth and reduces severity of vertebral malformation in triploid Atlantic salmon (Salmo salar L.)
M. A. Smedley et al.
AQUACULTURE (2016)
What do we not know about mitochondrial potassium channels?
Michal Laskowski et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2016)
De novo assembly of Sockeye salmon kidney transcriptomes reveal a limited early response to piscine reovirus with or without infectious hematopoietic necrosis virus superinfection
Mark P. Polinski et al.
BMC GENOMICS (2016)
A comparison of the response of diploid and triploid Atlantic salmon (Salmo salar) siblings to a commercial furunculosis vaccine and subsequent experimental infection with Aeromonas salmonicida
Lynn Chalmers et al.
FISH & SHELLFISH IMMUNOLOGY (2016)
Different gene expression profiles between normal and thermally selected strains of rainbow trout, Oncorhynchus mykiss, as revealed by comprehensive transcriptome analysis
Engkong Tan et al.
GENE (2016)
The Atlantic salmon genome provides insights into rediploidization
Sigbjorn Lien et al.
NATURE (2016)
Influence of feeding a high plant protein diet on growth and nutrient utilization to combined 'all-fish' growth-hormone transgenic diploid and triploid Atlantic salmon (Salmo salar L.)
R. Ganga et al.
AQUACULTURE (2015)
Atlantic salmon (Salmo salar) liver transcriptome response to diets containing Camelina sativa products
Xi Xue et al.
Comparative Biochemistry and Physiology D-Genomics & Proteomics (2015)
Transcriptional Response to Acute Thermal Exposure in Juvenile Chinook Salmon Determined by RNAseq
Katharine M. H. Tomalty et al.
G3-GENES GENOMES GENETICS (2015)
Adult triploid Atlantic salmon (Salmo salar) have higher dietary histidine requirements to prevent cataract development in seawater
J. F. Taylor et al.
AQUACULTURE NUTRITION (2015)
Effects of feeding level and sexual maturation on fatty acid composition of energy stores in diploid and triploid rainbow trout (Oncorhynchus mykiss)
Meghan L. Manor et al.
AQUACULTURE (2014)
Growth performance comparison of intercross-triploid, induced triploid, and diploid rainbow trout
Gregory M. Weber et al.
AQUACULTURE (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Transcriptomic responses to high water temperature in two species of Pacific salmon
Ken M. Jeffries et al.
EVOLUTIONARY APPLICATIONS (2014)
Triploid and diploid Atlantic salmon show similar susceptibility to infection with salmon lice Lepeophtheirus salmonis
Benedikt Frenzl et al.
PEST MANAGEMENT SCIENCE (2014)
Effect ofsevere environmental thermal stress on redox state in salmon
Toshiki Nakano et al.
REDOX BIOLOGY (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
Comparison of disease resistance between diploid, induced-triploid, and intercross-triploid rainbow trout including trout selected for resistance to Flavobacterium psychrophilum
Gregory M. Weber et al.
AQUACULTURE (2013)
Effects of combined 'all-fish' growth hormone transgenics and triploidy on growth and nutrient utilization of Atlantic salmon (Salmo salar L.) fed a practical grower diet of known composition
S. M. Tibbetts et al.
AQUACULTURE (2013)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Transcriptional responses to temperature and low oxygen stress in Atlantic salmon studied with next-generation sequencing technology
Pal A. Olsvik et al.
BMC GENOMICS (2013)
The effects of dissolved oxygen and triploidy on critical thermal maximum in brook charr (Salvelinus fontinalis)
Lauren E. Ellis et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY (2013)
Family-specific differences in growth rate and hepatic gene expression in juvenile triploid growth hormone (GH) transgenic Atlantic salmon (Salmo salar)
Qingheng Xu et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2013)
GH-IGF system regulation of attenuated muscle growth and lipolysis in Atlantic salmon reared at elevated sea temperatures
Ernst M. Hevroy et al.
JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMS AND ENVIRONMENTAL PHYSIOLOGY (2013)
Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction
Jian Ye et al.
BMC BIOINFORMATICS (2012)
Consequences of high temperatures and premature mortality on the transcriptome and blood physiology of wild adult sockeye salmon (Oncorhynchus nerka)
Ken M. Jeffries et al.
ECOLOGY AND EVOLUTION (2012)
Peroxiredoxin 6: A Bifunctional Enzyme with Glutathione Peroxidase and Phospholipase A2 Activities
Aron B. Fisher
ANTIOXIDANTS & REDOX SIGNALING (2011)
Identification of novel transcripts in annotated genomes using RNA-Seq
Adam Roberts et al.
BIOINFORMATICS (2011)
The effect of triploidy on juvenile Atlantic salmon (Salmo salar) response to varying levels of dietary phosphorus
Heather A. Burke et al.
AQUACULTURE (2010)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
BIOINFORMATICS (2010)
BigWig and BigBed: enabling browsing of large distributed datasets
W. J. Kent et al.
BIOINFORMATICS (2010)
Triploidy and full-sib family effects on survival and growth in juvenile Arctic charr (Salvelinus alpinus)
M. A. Chiasson et al.
AQUACULTURE (2009)
Polyploid fish and shellfish: Production, biology and applications to aquaculture for performance improvement and genetic containment
Francesc Piferrer et al.
AQUACULTURE (2009)
ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks
Gabriela Bindea et al.
BIOINFORMATICS (2009)
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
Eran Eden et al.
BMC BIOINFORMATICS (2009)
Highly Unsaturated Fatty Acid Synthesis in Atlantic Salmon: Characterization of ELOVL5-and ELOVL2-like Elongases
Sofia Morais et al.
MARINE BIOTECHNOLOGY (2009)
The effect of temperature and fish size on growth, feed intake, food conversion efficiency and stomach evacuation rate of Atlantic salmon post-smolts
Sigurd O. Handeland et al.
AQUACULTURE (2008)
Effect of acclimation temperature on routine metabolic rate in triploid salmonids
Michelle E. Atkins et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY (2008)
Differential rejection of salmon lice by pink and chum salmon: disease consequences and expression of proinflammatory genes
Simon R. M. Jones et al.
DISEASES OF AQUATIC ORGANISMS (2007)
Discovering motifs in ranked lists of DNA sequences
Eran Eden et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
Jan Hellemans et al.
GENOME BIOLOGY (2007)
Multiple microarray platforms utilized for hepatic gene expression profiling of GH transgenic coho salmon with and without ration restriction
Matthew L. Rise et al.
JOURNAL OF MOLECULAR ENDOCRINOLOGY (2006)
Characterization and multi-generational stability of the growth hormone transgene (EO-1α) responsible for enhanced growth rates in Atlantic Salmon
Edward S. Yaskowiak et al.
TRANSGENIC RESEARCH (2006)
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Jo Vandesompele et al.
GENOME BIOLOGY (2002)
Response of fish membranes to environmental temperature
T Farkas et al.
AQUACULTURE RESEARCH (2001)
A new mathematical model for relative quantification in real-time RT-PCR
MW Pfaffl
NUCLEIC ACIDS RESEARCH (2001)