4.5 Review

Extracellular matrix dynamics: tracking in biological systems and their implications

Journal

JOURNAL OF BIOLOGICAL ENGINEERING
Volume 16, Issue 1, Pages -

Publisher

BMC
DOI: 10.1186/s13036-022-00292-x

Keywords

Extracellular matrix (ECM); Lung; Proteomics; Newly synthesized protein; Stable isotope labeling by amino acids in cell culture (SILAC); Bioorthogonal non-canonical amino acid tagging (BONCAT); Bioprinting

Funding

  1. Elsa U. Pardee Foundation
  2. Shenzhen Excellent Technology Co., Ltd
  3. Department of Biomedical Engineering at Carnegie Mellon University
  4. China Scholarship Council

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The extracellular matrix (ECM) plays a crucial role in providing mechanical support and mediating biochemical interactions for cells. Understanding the dynamic changes in ECM composition and structure is essential for studying tissue homeostasis and disease progression. This review discusses the mechanisms of ECM-cell interactions, the modulation of tissue development and disease progression by ECM changes, and the implications of ECM dynamics in tissue engineering.
The extracellular matrix (ECM) constitutes the main acellular microenvironment of cells in almost all tissues and organs. The ECM not only provides mechanical support, but also mediates numerous biochemical interactions to guide cell survival, proliferation, differentiation, and migration. Thus, better understanding the everchanging temporal and spatial shifts in ECM composition and structure - the ECM dynamics - will provide fundamental insight regarding extracellular regulation of tissue homeostasis and how tissue states transition from one to another during diverse pathophysiological processes. This review outlines the mechanisms mediating ECM-cell interactions and highlights how changes in the ECM modulate tissue development and disease progression, using the lung as the primary model organ. We then discuss existing methodologies for revealing ECM compositional dynamics, with a particular focus on tracking newly synthesized ECM proteins. Finally, we discuss the ramifications ECM dynamics have on tissue engineering and how to implement spatial and temporal specific extracellular microenvironments into bioengineered tissues. Overall, this review communicates the current capabilities for studying native ECM dynamics and delineates new research directions in discovering and implementing ECM dynamics to push the frontier forward.

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