4.3 Review

Picornavirus translation strategies

Journal

FEBS OPEN BIO
Volume 12, Issue 6, Pages 1125-1141

Publisher

WILEY
DOI: 10.1002/2211-5463.13400

Keywords

cap-independent translation; host translation shutdown; IRES element; RNA structure; RNA virus; RNA-binding protein

Funding

  1. Autonomous Community of Madrid (Autonomous Community of Madrid and FEDER funds) [PID2020-115096RB-I00, B2017/BMD-3770]
  2. Fundacion Ramon Areces

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The genome of picornaviruses consists of a single RNA strand and relies on cellular machinery for replication. IRES elements in the genome control protein synthesis and subsequent replication steps. Recent studies show that these IRES elements have a modular structure and interact with ribosome subunits, eIFs, and RNA-binding proteins.
The genome of viruses classified as picornaviruses consists of a single monocistronic positive strand RNA. The coding capacity of these RNA viruses is rather limited, and thus, they rely on the cellular machinery for their viral replication cycle. Upon the entry of the virus into susceptible cells, the viral RNA initially competes with cellular mRNAs for access to the protein synthesis machinery. Not surprisingly, picornaviruses have evolved specialized strategies that successfully allow the expression of viral gene products, which we outline in this review. The main feature of all picornavirus genomes is the presence of a heavily structured RNA element on the 5 ' UTR, referred to as an internal ribosome entry site (IRES) element, which directs viral protein synthesis as well and, consequently, triggers the subsequent steps required for viral replication. Here, we will summarize recent studies showing that picornavirus IRES elements consist of a modular structure, providing sites of interaction for ribosome subunits, eIFs, and a selective group of RNA-binding proteins.

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