4.7 Article

iPODfish-A new method to infer the historical occurrence of diadromous fish species along river networks

Journal

SCIENCE OF THE TOTAL ENVIRONMENT
Volume 812, Issue -, Pages -

Publisher

ELSEVIER
DOI: 10.1016/j.scitotenv.2021.152437

Keywords

Data-informed methodology; Freshwater ecology; Species historical data; Pseudo-absences; Pseudo-presences; Segment scale distribution

Funding

  1. FCT-Fundacao para a Ciencia e a Tecnologia, I.P. [PTDC/ASP-AGR/29771/2017, UIDP/00239/2020, Norma Transitoria -DL 57/2016/CP1382/CT0020]
  2. Forest Research Centre - Fundacao para a Ciencia e a Tecnologia I.P. (FCT), Portugal [UIDB/00239/2020]
  3. Associate Laboratory TERRA [LA/P/0092/2020]
  4. FCT
  5. Fundação para a Ciência e a Tecnologia [PTDC/ASP-AGR/29771/2017, UIDP/00239/2020] Funding Source: FCT

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This study aims to establish a new methodological framework (iPODfish) to obtain a more complete representation of the historical occurrences of diadromous fish species across their full distribution range. The method is based on assumptions derived from freshwater network features, fish ecology, and known historical occurrences, and utilizes a tree-like decision process to establish historical pseudo-occurrences at the segment scale. Despite its inference nature, iPODfish is a conservative procedure that can be applied to any diadromous fish species with a relevant amount of historical data available, providing reliable historical occurrence outputs.
Available information on diadromous fish species historical occurrences is generally biased and incomplete across species distribution range and spatial scales. This work aims to establish a new methodological framework (iPODfish - Inferring Past Occurrences of Diadromous Fish) to obtain a more complete representation of the historical occurrences of diadromous fish species over their full distribution range. The iPODfish is based on assumptions, rules and thresholds derived from the interplay between freshwater network features, diadromous fish species ecology and known historical occurrence. These are used to establish historical pseudo-occurrences at the segment scale, i.e., locations where the species was most likely to be present or absent. The methodology is expressed by a tree-like representation of a stepwise, information supported, decision process. It has five steps (separating main river segments from tributary segments; accounting for segments specificities; imposing the relative distance threshold; imposing the Strahler value threshold, and; establishing the sub-basin Strahler threshold), divides into two moments of application (main river followed by the tributaries) and establishes presences, pseudo-presences and pseudo-absences. The iPODfish can deal with multiple information sources, cope with data bias and provide a reliable consistent historical occurrence output at the segment scale for the known historical geographical range of the species. Despite its inference nature, iPODfish is still a conservative procedure leading to ecologically coherent outputs that may be applied to any diadromous fish species (with a relevant amount of historical data available) in any river network throughout the globe because the concepts and definitions used are general ecological features of diadromous and freshwater networks. The method outputs are applicable in biogeographical and/or macroecological studies using historical data and may prove useful to the management and conservation of diadromous fish species.

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