4.8 Article

Thoughts on how to think (and talk) about RNA structure

Publisher

NATL ACAD SCIENCES
DOI: 10.1073/pnas.2112677119

Keywords

RNA structure; RNA dynamics; RNA folding

Funding

  1. NIH [R35GM118070, R01AI133348, R21AI157244]

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Recent events have brought RNA research into the spotlight, igniting a new passion for understanding the diverse functions and structure of RNA. However, there is a misunderstanding of the foundational characteristics of RNA structure, often viewed as a single floppy strand. The purpose of this article is to help adjust mental models, better utilize RNA structural information, and provide suggestions for future efforts.
Recent events have pushed RNA research into the spotlight. Continued discoveries of RNA with unexpected diverse functions in healthy and diseased cells, such as the role of RNA as both the source and countermeasure to a severe acute respiratory syndrome coronavirus 2 infection, are igniting a new passion for understanding this functionally and structurally versatile molecule. Although RNA structure is key to function, many foundational characteristics of RNA structure are misunderstood, and the default state of RNA is often thought of and depicted as a single floppy strand. The purpose of this perspective is to help adjust mental models, equipping the community to better use the fundamental aspects of RNA structural information in new mechanistic models, enhance experimental design to test these models, and refine data interpretation. We discuss six core observations focused on the inherent nature of RNA structure and how to incorporate these characteristics to better understand RNA structure. We also offer some ideas for future efforts to make validated RNA structural information available and readily used by all researchers.

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