Related references
Note: Only part of the references are listed.Pfam: The protein families database in 2021
Jaina Mistry et al.
NUCLEIC ACIDS RESEARCH (2021)
GRaSP: a graph-based residue neighborhood strategy to predict binding sites
Charles A. Santana et al.
BIOINFORMATICS (2020)
Exploring the computational methods for protein-ligand binding site prediction
Jingtian Zhao et al.
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (2020)
PrankWeb: a web server for ligand binding site prediction and visualization
Lukas Jendele et al.
NUCLEIC ACIDS RESEARCH (2019)
Continuous Automated Model EvaluatiOn (CAMEO) complementing the critical assessment of structure prediction in CASP12
Jurgen Haas et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2018)
COACH-D: improved protein-ligand binding sites prediction with refined ligand-binding poses through molecular docking
Qi Wu et al.
NUCLEIC ACIDS RESEARCH (2018)
P2Rank: machine learning based tool for rapid and accurate prediction of ligand binding sites from protein structure
Radoslav Krivak et al.
JOURNAL OF CHEMINFORMATICS (2018)
GASS-WEB: a web server for identifying enzyme active sites based on genetic algorithms
Joao P. A. Moraes et al.
NUCLEIC ACIDS RESEARCH (2017)
DeepSite: protein-binding site predictor using 3D-convolutional neural networks
J. Jimenez et al.
BIOINFORMATICS (2017)
DBSCAN Revisited, Revisited: Why and How You Should (Still) Use DBSCAN
Erich Schubert et al.
ACM TRANSACTIONS ON DATABASE SYSTEMS (2017)
GASS: identifying enzyme active sites with genetic algorithms
Sandro C. Izidoro et al.
BIOINFORMATICS (2015)
LigDig: a web server for querying ligand-protein interactions
Jonathan C. Fuller et al.
BIOINFORMATICS (2015)
Assessment of ligand binding site predictions in CASP10
Tiziano Gallo Cassarino et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2014)
aCSM: noise-free graph-based signatures to large-scale receptor-based ligand prediction
Douglas E. V. Pires et al.
BIOINFORMATICS (2013)
Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment
Jianyi Yang et al.
BIOINFORMATICS (2013)
BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions
Jianyi Yang et al.
NUCLEIC ACIDS RESEARCH (2013)
The FunFOLD2 server for the prediction of protein-ligand interactions
Daniel B. Roche et al.
NUCLEIC ACIDS RESEARCH (2013)
COFACTOR: an accurate comparative algorithm for structure-based protein function annotation
Ambrish Roy et al.
NUCLEIC ACIDS RESEARCH (2012)
FunFOLD: an improved automated method for the prediction of ligand binding residues using 3D models of proteins
Daniel B. Roche et al.
BMC BIOINFORMATICS (2011)
firestar-advances in the prediction of functionally important residues
Gonzalo Lopez et al.
NUCLEIC ACIDS RESEARCH (2011)
Fpocket: An open source platform for ligand pocket detection
Vincent Le Guilloux et al.
BMC BIOINFORMATICS (2009)
SITEHOUND-web: a server for ligand binding site identification in protein structures
Marylens Hernandez et al.
NUCLEIC ACIDS RESEARCH (2009)
PocketMatch: A new algorithm to compare binding sites in protein structures
Kalidas Yeturu et al.
BMC BIOINFORMATICS (2008)
A threading-based method (FINDSITE) for ligand-binding site prediction and functional annotation
Michal Brylinski et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
firestar -: prediction of functionally important residues using structural templates and alignment reliability
Gonzalo Lopez et al.
NUCLEIC ACIDS RESEARCH (2007)
FireDB - a database of functionally important residues from proteins of known structure
Gonzalo Lopez et al.
NUCLEIC ACIDS RESEARCH (2007)
The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data
CT Porter et al.
NUCLEIC ACIDS RESEARCH (2004)
Share Paper
