4.7 Article

A synergistic core for human brain evolution and cognition

Related references

Note: Only part of the references are listed.
Letter Physics, Multidisciplinary

Disentangling high-order mechanisms and high-order behaviours in complex systems

Fernando E. Rosas et al.

NATURE PHYSICS (2022)

Article Biology

Whole-brain modelling identifies distinct but convergent paths to unconsciousness in anaesthesia and disorders of consciousness

Andrea I. Luppi et al.

Summary: Perturbations in a large-scale whole-brain model reveal that anesthesia and injury can have similar effects on brain dynamics. A computational model incorporating PET and diffusion MRI data shows that spatially-specific local inhibition and connectome perturbation play key roles in reproducing the brain activity observed during anesthesia and disorders of consciousness. These findings suggest common neurobiological mechanisms underlying these conditions.

COMMUNICATIONS BIOLOGY (2022)

Review Neurosciences

The default mode network: where the idiosyncratic self meets the shared social world

Yaara Yeshurun et al.

Summary: The default mode network integrates external and internal information over long timescales to represent shared meaning. It is a "sense-making" network that forms rich contextual models by integrating external and intrinsic information.

NATURE REVIEWS NEUROSCIENCE (2021)

Article Multidisciplinary Sciences

The natural axis of transmitter receptor distribution in the human cerebral cortex

Alexandros Goulas et al.

Summary: Transmitter receptors in the human cerebral cortex form a natural axis reflecting molecular diversity, excitation/inhibition ratio, and changes in ionotropic and metabotropic receptor densities. This natural axis aligns with other dimensions of cortical organization, unifying the heterogeneity of the cerebral cortex.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2021)

Article Physics, Multidisciplinary

The physics of higher-order interactions in complex systems

Federico Battiston et al.

Summary: This Perspective explores the limitations of network representations for complex systems and the importance of higher-order interactions. While complex network models have been widely used for simulating the dynamics of interacting systems, real-world systems often involve higher-order interactions.

NATURE PHYSICS (2021)

Article Neurosciences

LSD alters dynamic integration and segregation in the human brain

Andrea Luppi et al.

Summary: Investigating the effects of LSD on brain function and subjective experience reveals that LSD increases the complexity of dynamic functional connectivity and weakens the relationship between functional and anatomical connectivity. Time-specific effects are correlated with different aspects of subjective experiences, providing a more nuanced and temporally-specific understanding of altered brain connectivity and complexity under psychedelics.

NEUROIMAGE (2021)

Article Multidisciplinary Sciences

Overcoming false-positive gene-category enrichment in the analysis of spatially resolved transcriptomic brain atlas data

Ben D. Fulcher et al.

Summary: The conventional gene category enrichment analysis applied to brain-wide atlas data results in biased outcomes, with potential false-positive associations. To address this issue, the authors introduce a flexible ensemble-based null model framework to enable appropriate inference in gene-category enrichment analysis.

NATURE COMMUNICATIONS (2021)

Article Neurosciences

Comparing spatial null models for brain maps

Ross D. Markello et al.

Summary: The study evaluated the performance of ten different null frameworks in statistical analysis of neuroimaging data. Results showed that null models that preserved spatial autocorrelation produced more realistic, conservative statistical estimates, but still had elevated false positive rates and variable performance across different analyses.

NEUROIMAGE (2021)

Article Neurosciences

Combining network topology and information theory to construct representative brain networks

Andrea Luppi et al.

Summary: This study aims to produce highly representative brain networks by minimizing the portrait divergence in network topologies, finding that optimal representativeness can be achieved by filtering functional networks based on partitions of around 200 regions. It provides neuroscientists with specific node definition and thresholding procedures to derive representative networks from human neuroimaging data.

NETWORK NEUROSCIENCE (2021)

Article Endocrinology & Metabolism

Assessment of a white matter reference region for 11C-UCB-J PET quantification

Samantha Rossano et al.

JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM (2020)

Article Neurosciences

Pypreclin: An automatic pipeline for macaque functional MRI preprocessing

Jordy Tasserie et al.

NEUROIMAGE (2020)

Article Biochemical Research Methods

Automated radiosynthesis of [11C]UCB-J for imaging synaptic density by positron emission tomography

Selena Milicevic Sephton et al.

JOURNAL OF LABELLED COMPOUNDS & RADIOPHARMACEUTICALS (2020)

Review Neurosciences

Conscious Processing and the Global Neuronal Workspace Hypothesis

George A. Mashour et al.

NEURON (2020)

Article Clinical Neurology

Synaptic Loss in Primary Tauopathies Revealed by [11C]UCB-JPositron Emission Tomography

Negin Holland et al.

MOVEMENT DISORDERS (2020)

Article Physics, Multidisciplinary

An operational information decomposition via synergistic disclosure

Fernando E. Rosas et al.

JOURNAL OF PHYSICS A-MATHEMATICAL AND THEORETICAL (2020)

Article Multidisciplinary Sciences

Different scaling of linear models and deep learning in UKBiobank brain images versus machine-learning datasets

Marc-Andre Schulz et al.

NATURE COMMUNICATIONS (2020)

Article Radiology, Nuclear Medicine & Medical Imaging

Quantifying SV2A density and drug occupancy in the human brain using [11C]UCB-J PET imaging and subcortical white matter as reference tissue

Michel Koole et al.

EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING (2019)

Article Multidisciplinary Sciences

Cortical patterning of abnormal morphometric similarity in psychosis is associated with brain expression of schizophrenia-related genes

Sarah E. Morgan et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Multidisciplinary Sciences

A macaque connectome for large-scale network simulations in TheVirtualBrain

Kelly Shen et al.

SCIENTIFIC DATA (2019)

Article Neurosciences

Advancing functional connectivity research from association to causation

Andrew T. Reid et al.

NATURE NEUROSCIENCE (2019)

Article Multidisciplinary Sciences

Decoupling of brain function from structure reveals regional behavioral specialization in humans

Maria Giulia Preti et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

Consciousness-specific dynamic interactions of brain integration and functional diversity

Andrea I. Luppi et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

Genetic mapping and evolutionary analysis of human-expanded cognitive networks

Yongbin Wei et al.

NATURE COMMUNICATIONS (2019)

Proceedings Paper Nuclear Science & Technology

Brain MRI Coil Attenuation Map Processing for the GE SIGNA PET/MR: Impact on PET Image Quantification and Uniformity

Roido Manavaki et al.

2019 IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE (NSS/MIC) (2019)

Article Physics, Fluids & Plasmas

Quantifying high-order interdependencies via multivariate extensions of the mutual information

Fernando E. Rosas et al.

PHYSICAL REVIEW E (2019)

Review Neurosciences

A population MRI brain template and analysis tools for the macaque

Jakob Seidlitz et al.

NEUROIMAGE (2018)

Article Neurosciences

On testing for spatial correspondence between maps of human brain structure and function

Aaron F. Alexander-Bloch et al.

NEUROIMAGE (2018)

Article Neurosciences

An Open Resource for Non-human Primate Imaging

Michael P. Milham et al.

NEURON (2018)

Article Psychology, Experimental

Basic functional trade-offs in cognition: An integrative framework

Marco Del Giudice et al.

COGNITION (2018)

Article Neurosciences

Adolescent Tuning of Association Cortex in Human Structural Brain Networks

Frantisek Vasa et al.

CEREBRAL CORTEX (2018)

Review Neurosciences

Dynamic models of large-scale brain activity

Michael Breakspear

NATURE NEUROSCIENCE (2017)

Review Neurosciences

Network neuroscience

Danielle S. Bassett et al.

NATURE NEUROSCIENCE (2017)

Article Multidisciplinary Sciences

Brain network dynamics are hierarchically organized in time

Diego Vidaurre et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Article Anatomy & Morphology

Multiple Transmitter Receptors in Regions and Layers of the Human Cerebral Cortex

Karl Zilles et al.

FRONTIERS IN NEUROANATOMY (2017)

Article Biochemistry & Molecular Biology

Exceptional Evolutionary Expansion of Prefrontal Cortex in Great Apes and Humans

Jeroen B. Smaers et al.

CURRENT BIOLOGY (2017)

Article Biochemistry & Molecular Biology

Mutations in Human Accelerated Regions Disrupt Cognition and Social Behavior

Ryan N. Doan et al.

Article Multidisciplinary Sciences

Large-scale signatures of unconsciousness are consistent with a departure from critical dynamics

Enzo Tagliazucchi et al.

JOURNAL OF THE ROYAL SOCIETY INTERFACE (2016)

Article Multidisciplinary Sciences

A multi-modal parcellation of human cerebral cortex

Matthew F. Glasser et al.

NATURE (2016)

Article Biology

Gene transcription profiles associated with inter-modular hubs and connection distance in human functional magnetic resonance imaging networks

Petra E. Vertes et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2016)

Article Multidisciplinary Sciences

Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome

Kirstie J. Whitaker et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Multidisciplinary Sciences

Situating the default-mode network along a principal gradient of macroscale cortical organization

Daniel S. Margulies et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Cell Biology

Imaging synaptic density in the living human brain

Sjoerd J. Finnema et al.

SCIENCE TRANSLATIONAL MEDICINE (2016)

Article Neurosciences

Default Mode Dynamics for Global Functional Integration

Deniz Vatansever et al.

JOURNAL OF NEUROSCIENCE (2015)

Review Neurosciences

Brain Networks and Cognitive Architectures

Steven E. Petersen et al.

NEURON (2015)

Review Biology

The restless brain: how intrinsic activity organizes brain function

Marcus E. Raichle

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)

Article Multidisciplinary Sciences

Signature of consciousness in the dynamics of resting-state brain activity

Pablo Barttfeld et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Multidisciplinary Sciences

Controllability of structural brain networks

Shi Gu et al.

NATURE COMMUNICATIONS (2015)

Article Computer Science, Interdisciplinary Applications

Attenuation Correction Synthesis for Hybrid PET-MR Scanners: Application to Brain Studies

Ninon Burgos et al.

IEEE TRANSACTIONS ON MEDICAL IMAGING (2014)

Article Mathematical & Computational Biology

Synergy, redundancy, and multivariate information measures: an experimentalist's perspective

Nicholas Timme et al.

JOURNAL OF COMPUTATIONAL NEUROSCIENCE (2014)

Article Robotics

JIDT: an information-theoretic toolkit for studying the dynamics of complex systems

Joseph T. Lizier

FRONTIERS IN ROBOTICS AND AI (2014)

Article Neurosciences

Multi-task connectivity reveals flexible hubs for adaptive task control

Michael W. Cole et al.

NATURE NEUROSCIENCE (2013)

Article Computer Science, Artificial Intelligence

A blind deconvolution approach to recover effective connectivity brain networks from resting state fMRI data

Guo-Rong Wu et al.

MEDICAL IMAGE ANALYSIS (2013)

Article Neurosciences

The WU-Minn Human Connectome Project: An overview

David C. Van Essen et al.

NEUROIMAGE (2013)

Article Neurosciences

The minimal preprocessing pipelines for the Human Connectome Project

Matthew F. Glasser et al.

NEUROIMAGE (2013)

Article Multidisciplinary Sciences

Deterministic Diffusion Fiber Tracking Improved by Quantitative Anisotropy

Fang-Cheng Yeh et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

Gene expression-based modeling of human cortical synaptic density

Manu S. Goyal et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Review Behavioral Sciences

The evolution of distributed association networks in the human brain

Randy L. Buckner et al.

TRENDS IN COGNITIVE SCIENCES (2013)

Article Biochemical Research Methods

Mapping the human connectome at multiple scales with diffusion spectrum MRI

Leila Cammoun et al.

JOURNAL OF NEUROSCIENCE METHODS (2012)

Article Multidisciplinary Sciences

An anatomically comprehensive atlas of the adult human brain transcriptome

Michael J. Hawrylycz et al.

NATURE (2012)

Article Neurosciences

Effects of network resolution on topological properties of human neocortex

Rafael Romero-Garcia et al.

NEUROIMAGE (2012)

Article Neurosciences

Conn: A Functional Connectivity Toolbox for Correlated and Anticorrelated Brain Networks

Susan Whitfield-Gabrieli et al.

BRAIN CONNECTIVITY (2012)

Article Neurosciences

The organization of the human cerebral cortex estimated by intrinsic functional connectivity

B. T. Thomas Yeo et al.

JOURNAL OF NEUROPHYSIOLOGY (2011)

Article Multidisciplinary Sciences

Spatio-temporal transcriptome of the human brain

Hyo Jung Kang et al.

NATURE (2011)

Article Biochemical Research Methods

Large-scale automated synthesis of human functional neuroimaging data

Tal Yarkoni et al.

NATURE METHODS (2011)

Article Neurosciences

Weight-conserving characterization of complex functional brain networks

Mikail Rubinov et al.

NEUROIMAGE (2011)

Review Neurosciences

Partial Least Squares (PLS) methods for neuroimaging: A tutorial and review

Anjali Krishnan et al.

NEUROIMAGE (2011)

Article Multidisciplinary Sciences

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

Fran Supek et al.

PLOS ONE (2011)

Article Biochemical Research Methods

Practical Measures of Integrated Information for Time-Series Data

Adam B. Barrett et al.

PLOS COMPUTATIONAL BIOLOGY (2011)

Article Neurosciences

Complex network measures of brain connectivity: Uses and interpretations

Mikail Rubinov et al.

NEUROIMAGE (2010)

Article Multidisciplinary Sciences

Regional aerobic glycolysis in the human brain

S. Neil Vaishnavi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemical Research Methods

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

Eran Eden et al.

BMC BIOINFORMATICS (2009)

Review Neurosciences

Extracting information from neuronal populations: information theory and decoding approaches

Rodrigo Quian Quiroga et al.

NATURE REVIEWS NEUROSCIENCE (2009)

Article Multidisciplinary Sciences

Modularity and community structure in networks

M. E. J. Newman

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

The human brain is intrinsically organized into dynamic, anticorrelated functional networks

MD Fox et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biology

Mapping brains without coordinates

R Kötter et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2005)

Article Physics, Multidisciplinary

Network information and connected correlations

E Schneidman et al.

PHYSICAL REVIEW LETTERS (2003)

Article Endocrinology & Metabolism

Noise reduction in the simplified reference tissue model for neuroreceptor functional Imaging

YJ Wu et al.

JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM (2002)

Article Multidisciplinary Sciences

A default mode of brain function

ME Raichle et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Physics, Multidisciplinary

Measuring information transfer

T Schreiber

PHYSICAL REVIEW LETTERS (2000)