4.6 Review

Catch, Modify and Analyze: Methods of Chemoselective Modification of Cysteine-Containing Peptides

Related references

Note: Only part of the references are listed.
Review Spectroscopy

Chemical isotope labeling for quantitative proteomics

Xiaobo Tian et al.

Summary: This article summarizes the advances in liquid chromatography and mass spectrometry in proteome quantification approaches, focusing on the principles, benefits, and limitations of chemical isotope labeling-based methods. It also discusses the potential and limitations of multiplex isotope labeling approaches for data-independent acquisition mode.

MASS SPECTROMETRY REVIEWS (2023)

Article Chemistry, Analytical

Veni, Vidi, Vici: Immobilized Peptide-Based Conjugates as Tools for Capture, Analysis, and Transformation

Marta Kowalska et al.

Summary: The analysis of peptide biomarkers is challenging due to the complex composition of cells and insufficient sensitivity of current analytical methods. Immobilized peptides offer a potential solution by capturing selected components or selectively tagging desired compounds, allowing for various applications such as studying enzyme specificity and activity. This review highlights the use of immobilized peptides in multiple analytical problems, including cysteine-containing peptide capturing, carbonyl compound tagging, deoxyfructosylated peptide enrichment, and azo bond formation.

CHEMOSENSORS (2022)

Article Biochemistry & Molecular Biology

Peptide Charge Derivatization as a Tool for Early Detection of Preeclampsia by Mass Spectrometry-A Comparison with the ELISA Test

Paulina Grocholska et al.

Summary: Early detection of preeclampsia biomarkers is crucial for reducing mortality risk for both mothers and infants. A study comparing LC-MS/MS with ELISA tests for biomarker identification, using peptide charge derivatization, showed that LC-MS/MS method provides an ultrasensitive tool for preeclampsia diagnosis, potentially revolutionizing medical diagnostics.

MOLECULES (2021)

Article Polymer Science

Effects of Thiol Substitution on the Kinetics and Efficiency of Thiol-Michael Reactions and Polymerizations

Katelyn F. Long et al.

Summary: The kinetic effects of thiol substitution and functionality in thiol-Michael reactions were examined, showing that different systems exhibit varying reaction rates and conversions. For monofunctional systems, electronic and steric interactions play a role in determining reaction rates, while in systems with multifunctional thiols, the substitution and functionality lead to different outcomes.

MACROMOLECULES (2021)

Review Biochemistry & Molecular Biology

Thiol- and Disulfide-Based Stimulus-Responsive Soft Materials and Self-Assembling Systems

Danielle M. Beaupre et al.

Summary: The review focuses on the properties and applications of synthetic thiol- and disulfide-based materials, particularly polymers. The emphasis is on soft and self-assembling materials, where interconversion of thiol and disulfide groups can trigger stimulus-responses and self-healing, for both biomedical and non-biomedical applications.

MOLECULES (2021)

Article Biochemistry & Molecular Biology

Detection of Podocin in Human Urine Sediment Samples by Charge Derivatization and LC-MS-MRM Method

Remigiusz Bachor et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)

Review Biochemistry & Molecular Biology

Recent advances of thiol-selective bioconjugation reactions

Philipp Ochtrop et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2020)

Article Multidisciplinary Sciences

Evaluation of podocin in urine in horses using qualitative and quantitative methods

Natalia Siwinska et al.

PLOS ONE (2020)

Review Chemistry, Multidisciplinary

Applications of Thiol-Ene Chemistry for Peptide Science

Mark D. Nolan et al.

FRONTIERS IN CHEMISTRY (2020)

Review Biochemistry & Molecular Biology

Cysteine reactivity across the subcellular universe

Daniel W. Bak et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2019)

Review Biochemistry & Molecular Biology

Trends in the Design of New Isobaric Labeling Reagents for Quantitative Proteomics

Remigiusz Bachor et al.

MOLECULES (2019)

Article Physics, Atomic, Molecular & Chemical

Identyfication of tryptic podocin peptide in the feline urine sediments using LC-MS/MRM method

Remigiusz Bachor et al.

INTERNATIONAL JOURNAL OF MASS SPECTROMETRY (2019)

Article Chemistry, Physical

On the mechanism of spontaneous thiol-disulfide exchange in proteins

Marina Putzu et al.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2018)

Article Multidisciplinary Sciences

Accessibility explains preferred thiol-disulfide isomerization in a protein domain

Katra Kolsek et al.

SCIENTIFIC REPORTS (2017)

Review Biochemistry & Molecular Biology

Chemical Protein Modification through Cysteine

Smita B. Gunnoo et al.

CHEMBIOCHEM (2016)

Article Chemistry, Analytical

Homogenous Phase Enrichment of Cysteine-Containing Peptides for Improved Proteome Coverage

Jacek R. Wisniewski et al.

ANALYTICAL CHEMISTRY (2015)

Article Biochemistry & Molecular Biology

Mass spectrometry in studies of protein thiol chemistry and signaling: Opportunities and caveats

Nelmi O. Devarie Baez et al.

FREE RADICAL BIOLOGY AND MEDICINE (2015)

Review Chemistry, Analytical

Surface Plasmon Resonance: A Versatile Technique for Biosensor Applications

Hoang Hiep Nguyen et al.

SENSORS (2015)

Article Biochemical Research Methods

Long-Term Stabilization of Maleimide-Thiol Conjugates

Shaun D. Fontaine et al.

BIOCONJUGATE CHEMISTRY (2015)

Article Biochemical Research Methods

Indispensable Platforms for Bioimmobilization: Maleimide-Based Thiol Reactive Hydrogels

Eun Ju Park et al.

BIOCONJUGATE CHEMISTRY (2014)

Review Chemistry, Physical

The Thiol-Michael Addition Click Reaction: A Powerful and Widely Used Tool in Materials Chemistry

Devatha P. Nair et al.

CHEMISTRY OF MATERIALS (2014)

Article Physics, Atomic, Molecular & Chemical

Sensitive detection of charge derivatized peptides at the attomole level using nano-LC-ESI-MRM analysis

Remigiusz Bachor et al.

INTERNATIONAL JOURNAL OF MASS SPECTROMETRY (2014)

Article Biochemical Research Methods

Peptides derivatized with bicyclic quaternary ammonium ionization tags. Sequencing via tandem mass spectrometry

Bartosz Setner et al.

JOURNAL OF MASS SPECTROMETRY (2014)

Article Chemistry, Analytical

Simple enrichment of thiol-containing biomolecules by using zinc(II)-cyclen-functionalized magnetic beads

Haruto Fujioka et al.

JOURNAL OF SEPARATION SCIENCE (2014)

Article Biochemical Research Methods

Selective Detection of Carbohydrates and Their Peptide Conjugates by ESI-MS Using Synthetic Quaternary Ammonium Salt Derivatives of Phenylboronic Acids

Monika Kijewska et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2014)

Article Biochemical Research Methods

Chemical Derivatization of Peptide Carboxyl Groups for Highly Efficient Electron Transfer Dissociation

Brian L. Frey et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2013)

Article Biochemistry & Molecular Biology

New method of peptide cleavage based on Edman degradation

Remigiusz Bachor et al.

MOLECULAR DIVERSITY (2013)

Review Spectroscopy

The usefulness of hydrazine derivatives for mass spectrometric analysis of carbohydrates

Erika Lattova et al.

MASS SPECTROMETRY REVIEWS (2013)

Article Biochemical Research Methods

High sensitivity mass spectrometric quantification of serum growth hormone by amphiphilic peptide conjugation

Cristian G. Arsene et al.

JOURNAL OF MASS SPECTROMETRY (2012)

Article Biochemical Research Methods

A New Strategy of Using O18-Labeled Iodoacetic Acid for Mass Spectrometry-Based Protein Quantitation

Shunhai Wang et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2012)

Article Biotechnology & Applied Microbiology

Conjugation site modulates the in vivo stability and therapeutic activity of antibody-drug conjugates

Ben-Quan Shen et al.

NATURE BIOTECHNOLOGY (2012)

Article Biochemical Research Methods

Tunable Degradation of Maleimide-Thiol Adducts in Reducing Environments

Aaron D. Baldwin et al.

BIOCONJUGATE CHEMISTRY (2011)

Review Spectroscopy

CYSTEINE TAGGING FOR MS-BASED PROTEOMICS

Priscille Giron et al.

MASS SPECTROMETRY REVIEWS (2011)

Article Biochemical Research Methods

Selection of thiol- and disulfide-containing proteins of Escherichia coli on activated thiol-Sepharose

Wentao Hu et al.

ANALYTICAL BIOCHEMISTRY (2010)

Article Biochemistry & Molecular Biology

Precision Mapping of an In Vivo N-Glycoproteome Reveals Rigid Topological and Sequence Constraints

Dorota F. Zielinska et al.

Article Chemistry, Multidisciplinary

Increasing the hydrophobicity and electrospray response of glycans through derivatization with novel cationic hydrazides

Michael S. Bereman et al.

CHEMICAL COMMUNICATIONS (2010)

Article Biochemical Research Methods

Development of a rapid and sensitive method for determination of cysteine/cystine ratio in chemically defined media

Hassan Alwael et al.

JOURNAL OF CHROMATOGRAPHY A (2010)

Article Biochemical Research Methods

Cysteinyl Peptide Capture for Shotgun Proteomics: Global Assessment of Chemoselective Fractionation

De Lin et al.

JOURNAL OF PROTEOME RESEARCH (2010)

Article Biochemical Research Methods

Brain Phosphoproteome Obtained by a FASP-Based Method Reveals Plasma Membrane Protein Topology

Jacek R. Wisniewski et al.

JOURNAL OF PROTEOME RESEARCH (2010)

Article Chemistry, Multidisciplinary

Protein Modification, Bioconjugation, and Disulfide Bridging Using Bromomaleimides

Mark E. B. Smith et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)

Article Biochemical Research Methods

Interlaboratory Study Characterizing a Yeast Performance Standard for Benchmarking LC-MS Platform Performance

Amanda G. Paulovich et al.

MOLECULAR & CELLULAR PROTEOMICS (2010)

Article Chemistry, Analytical

Enhanced Electron Transfer Dissociation through Fixed Charge Derivatization of Cysteines

Lisa Vasicek et al.

ANALYTICAL CHEMISTRY (2009)

Article Chemistry, Multidisciplinary

Bromomaleimides: new reagents for the selective and reversible modification of cysteine

Lauren M. Tedaldi et al.

CHEMICAL COMMUNICATIONS (2009)

Review Chemistry, Multidisciplinary

Chemical Modification of Proteins at Cysteine: Opportunities in Chemistry and Biology

Justin M. Chalker et al.

CHEMISTRY-AN ASIAN JOURNAL (2009)

Article Biochemical Research Methods

Enrichment of N-terminal cysteinyl-peptides by covalent capture

Priscille Giron et al.

JOURNAL OF PROTEOMICS (2009)

Article Biochemical Research Methods

Universal sample preparation method for proteome analysis

Jacek R. Wisniewski et al.

NATURE METHODS (2009)

Article Biochemical Research Methods

Cysteine-reactive covalent capture tags for enrichment of cysteine-containing peptides

Priscille Giron et al.

RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2009)

Article Polymer Science

Straightforward synthesis of cysteine-reactive telechelic polystyrene

Zachary P. Tolstyka et al.

MACROMOLECULES (2008)

Article Multidisciplinary Sciences

Quantifying changes in the thiol redox proteome upon oxidative stress in vivo

Lars I. Leichert et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Identification of enzymes and regulatory proteins in Escherichia coli that are oxidized under nitrogen, carbon, or phosphate starvation

Yasuko Noda et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Chemistry, Medicinal

Catalysis of imido group hydrolysis in a maleimide conjugate

Jeet Kalia et al.

BIOORGANIC & MEDICINAL CHEMISTRY LETTERS (2007)

Article Chemistry, Analytical

Achieving augmented limits of detection for peptides with hydrophobic alkyl tags

Jennifer L. Frahm et al.

ANALYTICAL CHEMISTRY (2007)

Article Biotechnology & Applied Microbiology

eComputational prediction of proteotypic peptides for quantitative proteomics

Parag Mallick et al.

NATURE BIOTECHNOLOGY (2007)

Article Chemistry, Multidisciplinary

A novel quantitative proteomics reagent based on soluble nanopolymers

Minjie Guo et al.

CHEMICAL COMMUNICATIONS (2007)

Article Biochemistry & Molecular Biology

Human epidermal cell protein responses to arsenite treatment in culture

C Lee et al.

CHEMICO-BIOLOGICAL INTERACTIONS (2005)

Article Biochemical Research Methods

Sample preparation and digestion for proteomic analyses using spin filters

LL Manza et al.

PROTEOMICS (2005)

Article Biochemical Research Methods

Defining the plant disulfide proteome

K Lee et al.

ELECTROPHORESIS (2004)

Article Chemistry, Multidisciplinary

Dopamine as a robust anchor to immobilize functional molecules on the iron oxide shell of magnetic nanoparticles

CJ Xu et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)

Article Multidisciplinary Sciences

Global analysis of protein expression in yeast

S Ghaemmaghami et al.

NATURE (2003)

Review Medical Laboratory Technology

Ion suppression in mass spectrometry

TM Annesley

CLINICAL CHEMISTRY (2003)

Article Immunology

Quantitative proteome analysis: Methods and applications

R Aebersold

JOURNAL OF INFECTIOUS DISEASES (2003)

Article Biochemical Research Methods

Proteomics based on selecting and quantifying cysteine containing peptides by covalent chromatography

SH Wang et al.

JOURNAL OF CHROMATOGRAPHY A (2001)

Review Engineering, Biomedical

Peptide and protein PEGylation: a review of problems and solutions

FM Veronese

BIOMATERIALS (2001)