Related references
Note: Only part of the references are listed.Trycycler: consensus long-read assemblies for bacterial genomes
Ryan R. Wick et al.
GENOME BIOLOGY (2021)
Assembly of long, error-prone reads using repeat graphs
Mikhail Kolmogorov et al.
NATURE BIOTECHNOLOGY (2019)
Genomic comparison of 60 completely sequenced bacteriophages that infect Erwinia and/or Pantoea bacteria
Daniel W. Thompson et al.
VIROLOGY (2019)
NanoPack: visualizing and processing long-read sequencing data
Wouter De Coster et al.
BIOINFORMATICS (2018)
An Introduced Crop Plant Is Driving Diversification of the Virulent Bacterial Pathogen Erwinia tracheiphila
Lori R. Shapiro et al.
MBIO (2018)
Draft Genome Sequence of an Erwinia tracheiphila Isolate from an Infected Muskmelon (Cucumis melo)
Lori R. Shapiro et al.
MICROBIOLOGY RESOURCE ANNOUNCEMENTS (2018)
Fast and accurate de novo genome assembly from long uncorrected reads
Robert Vaser et al.
GENOME RESEARCH (2017)
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
Ryan R. Wick et al.
PLOS COMPUTATIONAL BIOLOGY (2017)
Extraction of high-molecular-weight genomic DNA for long-read sequencing of single molecules
Baptiste Mayjonade et al.
BIOTECHNIQUES (2016)
Horizontal Gene Acquisitions, Mobile Element Proliferation, and Genome Decay in the Host-Restricted Plant Pathogen Erwinia Tracheiphila
Lori R. Shapiro et al.
GENOME BIOLOGY AND EVOLUTION (2016)
NCBI prokaryotic genome annotation pipeline
Tatiana Tatusova et al.
NUCLEIC ACIDS RESEARCH (2016)
Differential Colonization Dynamics of Cucurbit Hosts by Erwinia tracheiphila
Claudio M. Vrisman et al.
PHYTOPATHOLOGY (2016)
Bandage: interactive visualization ofde novogenome assemblies: Fig. 1.
Ryan R. Wick et al.
BIOINFORMATICS (2015)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
Bacterial Wilt of Cucurbits: Resurrecting a Classic Pathosystem
Erika Saalau Rojas et al.
PLANT DISEASE (2015)
Optimizing Rowcover Deployment for Managing Bacterial Wilt and Using Compost for Organic Muskmelon Production
Elsa S. Sanchez et al.
HORTTECHNOLOGY (2015)
Circlator: automated circularization of genome assemblies using long sequencing reads
Martin Hunt et al.
GENOME BIOLOGY (2015)
Draft Genome Sequence of Erwinia tracheiphila, an Economically Important Bacterial Pathogen of Cucurbits
Lori R. Shapiro et al.
GENOME ANNOUNCEMENTS (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
The MaSuRCA genome assembler
Aleksey V. Zimin et al.
BIOINFORMATICS (2013)
QUAST: quality assessment tool for genome assemblies
Alexey Gurevich et al.
BIOINFORMATICS (2013)
Genetic and Virulence Variability Among Erwinia tracheiphila Strains Recovered from Different Cucurbit Hosts
E. Saalau Rojas et al.
PHYTOPATHOLOGY (2013)
Epiphytic Survival of Erwinia tracheiphila on Muskmelon (Cucumis melo L.)
E. Saalau Rojas et al.
PLANT DISEASE (2012)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Using Trap Crops for Control of Acalymma vittatum (Coleoptera: Chrysomelidae) Reduces Insecticide Use in Butternut Squash
A. Cavanagh et al.
JOURNAL OF ECONOMIC ENTOMOLOGY (2009)
Mauve: Multiple alignment of conserved genomic sequence with rearrangements
ACE Darling et al.
GENOME RESEARCH (2004)
Fast algorithms for large-scale genome alignment and comparison
AL Delcher et al.
NUCLEIC ACIDS RESEARCH (2002)