Related references
Note: Only part of the references are listed.RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences
Stephen K. Burley et al.
NUCLEIC ACIDS RESEARCH (2021)
Protein interaction interface region prediction by geometric deep learning
Bowen Dai et al.
BIOINFORMATICS (2021)
Accurate prediction of inter-protein residue-residue contacts for homo-oligomeric protein complexes
Yumeng Yan et al.
BRIEFINGS IN BIOINFORMATICS (2021)
Computed structures of core eukaryotic protein complexes
Ian R. Humphreys et al.
SCIENCE (2021)
Variation in Leishmania chemokine suppression driven by diversification of the GP63 virulence factor
Alejandro L. Antonia et al.
PLOS NEGLECTED TROPICAL DISEASES (2021)
Highly accurate protein structure prediction with AlphaFold
John Jumper et al.
NATURE (2021)
Accurate prediction of protein structures and interactions using a three-track neural network
Minkyung Baek et al.
SCIENCE (2021)
PPAR-Responsive Elements Enriched with Alu Repeats May Contribute to Distinctive PPARγ-DNMT1 Interactions in the Genome
Amit Sharma et al.
CANCERS (2021)
BIPSPI: a method for the prediction of partner-specific protein-protein interfaces
Ruben Sanchez-Garcia et al.
BIOINFORMATICS (2019)
Interactome INSIDER: a structural interactome browser for genomic studies
Michael J. Meyer et al.
NATURE METHODS (2018)
ISPRED4: interaction sites PREDiction in protein structures with a refining grammar model
Castrense Savojardo et al.
BIOINFORMATICS (2017)
3DIANA: 3D Domain Interaction Analysis: A Toolbox for Quaternary Structure Modeling
Joan Segura et al.
BIOPHYSICAL JOURNAL (2016)
Recent Advances in Protein-Protein Docking
Qian Zhang et al.
CURRENT DRUG TARGETS (2016)
DockQ: A Quality Measure for Protein-Protein Docking Models
Sankar Basu et al.
PLOS ONE (2016)
Using neighborhood cohesiveness to infer interactions between protein domains
Joan Segura et al.
BIOINFORMATICS (2015)
Computational prediction of protein interfaces: A review of data driven methods
Li C. Xue et al.
FEBS LETTERS (2015)
VORFFIP-Driven Dock: V-D2OCK, a Fast and Accurate Protein Docking Strategy
Joan Segura et al.
PLOS ONE (2015)
PAIRpred: Partner-specific prediction of interacting residues from sequence and structure
Fayyaz ul Amir Afsar Minhas et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2014)
Interactome3D: adding structural details to protein networks
Roberto Mosca et al.
NATURE METHODS (2013)
Protein docking using case-based reasoning
Anisah W. Ghoorah et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2013)
A holistic in silico approach to predict functional sites in protein structures
Joan Segura et al.
BIOINFORMATICS (2012)
HomPPI: a class of sequence homology based protein-protein interface prediction methods
Li C. Xue et al.
BMC BIOINFORMATICS (2011)
Improving the prediction of protein binding sites by combining heterogeneous data and Voronoi diagrams
Joan Segura et al.
BMC BIOINFORMATICS (2011)
Partner-Aware Prediction of Interacting Residues in Protein-Protein Complexes from Sequence Data
Shandar Ahmad et al.
PLOS ONE (2011)
Prediction of Protein-Protein Interaction Sites in Sequences and 3D Structures by Random Forests
Mile Sikic et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
pyDock: Electrostatics and desolvation for effective scoring of rigid-body protein-protein docking
Tammy Man-Kuang Cheng et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
PatchDock and SymmDock: servers for rigid and symmetric docking
D Schneidman-Duhovny et al.
NUCLEIC ACIDS RESEARCH (2005)
Structure of the subtilisin Carlsberg-OMTKY3 complex reveals two different ovomucoid conformations
JT Maynes et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2005)
On the number of protein-protein interactions in the yeast proteome
A Grigoriev
NUCLEIC ACIDS RESEARCH (2003)
Predicted protein-protein interaction sites from local sequence information
Y Ofran et al.
FEBS LETTERS (2003)
HADDOCK: A protein-protein docking approach based on biochemical or biophysical information
C Dominguez et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)
The Protein Data Bank
HM Berman et al.
NUCLEIC ACIDS RESEARCH (2000)
Share Paper
