Related references
Note: Only part of the references are listed.Cohort Profile Update: The Swiss HIV Cohort Study (SHCS)
Alexandra U. Scherrer et al.
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY (2022)
HIV-1 Gag-Pol Sequences from Ugandan Early Infections Reveal Sequence Variants Associated with Elevated Replication Capacity
Anne Kapaata et al.
VIRUSES-BASEL (2021)
A Novel High Throughput, Parallel Infection Assay for Determining the Replication Capacities of 346 Primary HIV-1 Isolates of the Zurich Primary HIV-1 Infection Study in Primary Cells
Audrey E. Rindler et al.
VIRUSES-BASEL (2021)
Human Immunotypes Impose Selection on Viral Genotypes Through Viral Epitope Specificity
Migle Gabrielaite et al.
JOURNAL OF INFECTIOUS DISEASES (2021)
Infection with multiple HIV-1 founder variants is associated with lower viral replicative capacity, faster CD4+T cell decline and increased immune activation during acute infection
Gladys N. Macharia et al.
PLOS PATHOGENS (2020)
Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART
Chenjie Wan et al.
NATURE COMMUNICATIONS (2020)
Viral Diversity Based on Next-Generation Sequencing of HIV-1 Provides Precise Estimates of Infection Recency and Time Since Infection
Louisa A. Carlisle et al.
JOURNAL OF INFECTIOUS DISEASES (2019)
Evolution of the Envelope Glycoprotein of HIV-1 Clade B toward Higher Infectious Properties over the Course of the Epidemic
Melanie Bouvin-Pley et al.
JOURNAL OF VIROLOGY (2019)
Link between the numbers of particles and variants founding new HIV-1 infections depends on the timing of transmission
Robin N. Thompson et al.
VIRUS EVOLUTION (2019)
Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+T-Cell Decline, and Per-Parasite Pathogenicity
Frederic Bertels et al.
MOLECULAR BIOLOGY AND EVOLUTION (2018)
Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection
Doty B. A. Ojwach et al.
JOURNAL OF VIROLOGY (2018)
Evaluation of the Predictive Potential of the Short Acute Retroviral Syndrome Severity Score for HIV-1 Disease Progression in Individuals With Acute HIV Infection
Martin Hoenigl et al.
JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES (2017)
Subtype-Specific Differences in Gag-Protease-Driven Replication Capacity Are Consistent with Intersubtype Differences in HIV-1 Disease Progression
Marion W. Kiguoya et al.
JOURNAL OF VIROLOGY (2017)
Replication Capacity of Viruses from Acute Infection Drives HIV-1 Disease Progression
Philippe Selhorst et al.
JOURNAL OF VIROLOGY (2017)
Parent-offspring regression to estimate the heritability of an HIV-1 trait in a realistic setup
Nadine Bachmann et al.
RETROVIROLOGY (2017)
Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe
Francois Blanquart et al.
PLOS BIOLOGY (2017)
Estimating time of HIV-1 infection from next-generation sequence diversity
Vadim Puller et al.
PLOS COMPUTATIONAL BIOLOGY (2017)
Prospective Study of Acute HIV-1 Infection in Adults in East Africa and Thailand
Merlin L. Robb et al.
NEW ENGLAND JOURNAL OF MEDICINE (2016)
Differential Effects of Environmental and Genetic Factors on T and B Cell Immune Traits
Raul Aguirre-Gamboa et al.
CELL REPORTS (2016)
Evolution of HIV virulence in response to widespread scale up of antiretroviral therapy: a modeling study
Joshua T. Herbeck et al.
VIRUS EVOLUTION (2016)
A Novel Acute Retroviral Syndrome Severity Score Predicts the Key Surrogate Markers for HIV-1 Disease Progression
Dominique L. Braun et al.
PLOS ONE (2014)
Selection bias at the heterosexual HIV-1 transmission bottleneck
Jonathan M. Carlson et al.
SCIENCE (2014)
Next-Generation Sequencing of HIV-1 RNA Genomes: Determination of Error Rates and Minimizing Artificial Recombination
Francesca Di Giallonardo et al.
PLOS ONE (2013)
Ability of HIV-1 Nef to downregulate CD4 and HLA class I differs among viral subtypes
Jaclyn K. Mann et al.
RETROVIROLOGY (2013)
Within-host and between-host evolutionary rates across the HIV-1 genome
Samuel Alizon et al.
RETROVIROLOGY (2013)
Is the virulence of HIV changing? A meta-analysis of trends in prognostic markers of HIV disease progression and transmission
Joshua T. Herbeck et al.
AIDS (2012)
Role of Transmitted Gag CTL Polymorphisms in Defining Replicative Capacity and Early HIV-1 Pathogenesis
Jessica L. Prince et al.
PLOS PATHOGENS (2012)
Effect of early antiretroviral therapy during primary HIV-1 infection on cell-associated HIV-1 DNA and plasma HIV-1 RNA
Sara Gianella et al.
ANTIVIRAL THERAPY (2011)
Characterization of Human Immunodeficiency Virus Type 1 (HIV-1) Diversity and Tropism in 145 Patients With Primary HIV-1 Infection
Philip Rieder et al.
CLINICAL INFECTIOUS DISEASES (2011)
Ambiguous Nucleotide Calls From Population-based Sequencing of HIV-1 are a Marker for Viral Diversity and the Age of Infection
Roger D. Kouyos et al.
CLINICAL INFECTIOUS DISEASES (2011)
HIV-1 transmission after cessation of early antiretroviral therapy among men having sex with men
Philip Rieder et al.
AIDS (2010)
Differential Anti-APOBEC3G Activity of HIV-1 Vif Proteins Derived from Different Subtypes
Yukie Iwabu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Molecular Epidemiology Reveals Long-Term Changes in HIV Type 1 Subtype B Transmission in Switzerland
Roger D. Kouyos et al.
JOURNAL OF INFECTIOUS DISEASES (2010)
Gag-Protease-Mediated Replication Capacity in HIV-1 Subtype C Chronic Infection: Associations with HLA Type and Clinical Parameters
Jaclyn K. Wright et al.
JOURNAL OF VIROLOGY (2010)
Subtype-associated differences in HIV-1 reverse transcription affect the viral replication
Sergey Iordanskiy et al.
RETROVIROLOGY (2010)
Replication Capacity in Relation to Immunologic and Virologic Outcomes in HIV-1-Infected Treatment-Naive Subjects
Gail Skowron et al.
JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES (2009)
A whole-genome association study of major determinants for host control of HIV-1
Jacques Fellay et al.
SCIENCE (2007)
Is HIV-1 evolving to a less virulent form in humans?
Kevin K. Arien et al.
NATURE REVIEWS MICROBIOLOGY (2007)
Differences in the fitness of two diverse wild-type human immunodeficiency virus type 1 isolates are related to the efficiency of cell binding and entry
AJ Marozsan et al.
JOURNAL OF VIROLOGY (2005)
Higher CD4+ T cell counts associated with low viral pol replication capacity among treatment-naive adults in early HIV-1 infection
JD Barbour et al.
JOURNAL OF INFECTIOUS DISEASES (2004)
Relationship between in vitro human immunodeficiency virus type 1 replication rate and virus load in plasma
TB Campbell et al.
JOURNAL OF VIROLOGY (2003)
Human immunodeficiency virus type 1 fitness is a determining factor in viral rebound and set point in chronic infection
A Trkola et al.
JOURNAL OF VIROLOGY (2003)
Infection with multiple human immunodeficiency virus type 1 variants is associated with faster disease progression
M Sagar et al.
JOURNAL OF VIROLOGY (2003)
Catalytic efficiency and vitality of HIV-1 proteases from African viral subtypes
A Velazquez-Campoy et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)