Related references
Note: Only part of the references are listed.Fast variational alignment of non-flat 1D displacements for applications in neuroimaging
Philipp Flotho et al.
JOURNAL OF NEUROSCIENCE METHODS (2021)
Begonia-A Two-Photon Imaging Analysis Pipeline for Astrocytic Ca2+ Signals
Daniel M. Bjornstad et al.
FRONTIERS IN CELLULAR NEUROSCIENCE (2021)
EZcalcium: Open-Source Toolbox for Analysis of Calcium Imaging Data
Daniel A. Cantu et al.
FRONTIERS IN NEURAL CIRCUITS (2020)
Real-time 3D movement correction for two-photon imaging in behaving animals
Victoria A. Griffiths et al.
NATURE METHODS (2020)
Combined Optogenetic Approaches Reveal Quantitative Dynamics of Endogenous Noradrenergic Transmission in the Brain
Shinobu Nomura et al.
ISCIENCE (2020)
Dendritic coincidence detection in Purkinje neurons of awake mice
Christopher J. Roome et al.
ELIFE (2020)
CaImAn an open source tool for scalable calcium imaging data analysis
Andrea Giovannucci et al.
ELIFE (2019)
NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data
Eftychios A. Pnevmatikakis et al.
JOURNAL OF NEUROSCIENCE METHODS (2017)
Single-fluorophore biosensors based on conformation-sensitive GFP variants
Agnes Bonnot et al.
FASEB JOURNAL (2014)
Chronic cranial window with access port for repeated cellular manipulations, drug application, and electrophysiology
Christopher J. Roome et al.
FRONTIERS IN CELLULAR NEUROSCIENCE (2014)
ImgLib2-generic image processing in Java
Tobias Pietzsch et al.
BIOINFORMATICS (2012)
A Database and Evaluation Methodology for Optical Flow
Simon Baker et al.
INTERNATIONAL JOURNAL OF COMPUTER VISION (2011)
A reproducible evaluation of ANTs similarity metric performance in brain image registration
Brian B. Avants et al.
NEUROIMAGE (2011)
elastix: A Toolbox for Intensity-Based Medical Image Registration
Stefan Klein et al.
IEEE TRANSACTIONS ON MEDICAL IMAGING (2010)
Automated correction of fast motion artifacts for two-photon imaging of awake animals
David S. Greenberg et al.
JOURNAL OF NEUROSCIENCE METHODS (2009)
Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain
B. B. Avants et al.
MEDICAL IMAGE ANALYSIS (2008)
Highly accurate optic flow computation with theoretically justified warping
Nils Papenberg et al.
INTERNATIONAL JOURNAL OF COMPUTER VISION (2006)
Deep tissue two-photon microscopy
F Helmchen et al.
NATURE METHODS (2005)
Variational methods for multimodal image matching
G Hermosillo et al.
INTERNATIONAL JOURNAL OF COMPUTER VISION (2002)