4.7 Article

Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China

Journal

INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
Volume 116, Issue -, Pages 411-417

Publisher

ELSEVIER SCI LTD
DOI: 10.1016/j.ijid.2022.01.035

Keywords

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Funding

  1. National Natural Science Foundation of China [72025404, 71621002, 72074209]
  2. New Generation Artificial Intelligence Development Plan of China (2015-2030) [2021ZD0111205]
  3. Beijing Natural Science Foundation [L192012]
  4. Beijing Nova Program [Z2011000 06820085]

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The study aims to reconstruct the complete transmission chain of the COVID-19 outbreak in Beijing's Xinfadi Market using epidemiological investigation data, contributing to understanding transmission dynamics and risk factors. Results show that the transmission rate of COVID-19 within households is 9.2%, and older people are more susceptible. The accuracy of the reconstructed transmission chain is 67.26%. In the Beef and Mutton Trading Hall of Xinfadi market, most transmission occurs within 20 meters, with an average transmission distance of 13.00 meters and the deepest transmission generation being the 9th.
Objectives: The aim of the study was to reconstruct the complete transmission chain of the COVID-19 outbreak in Beijing's Xinfadi Market using data from epidemiological investigations, which contributes to reflecting transmission dynamics and transmission risk factors. Methods: We set up a transmission model, and the model parameters are estimated from the survey data via Markov chain Monte Carlo sampling. Bayesian data augmentation approaches are used to account for uncertainty in the source of infection, unobserved onset, and infection dates. Results: The rate of transmission of COVID-19 within households is 9.2%. Older people are more susceptible to infection. The accuracy of our reconstructed transmission chain was 67.26%. In the gathering place of this outbreak, the Beef and Mutton Trading Hall of Xinfadi market, most of the transmission occurs within 20 m, only 19.61% of the transmission occurs over a wider area ( >20 m), with an overall average transmission distance of 13.00 m. The deepest transmission generation is 9. In this outbreak, there were 2 abnormally high transmission events. Conclusions: The statistical method of reconstruction of transmission trees from incomplete epidemic data provides a valuable tool to help understand the complex transmission factors and provides a practical guideline for investigating the characteristics of the development of epidemics and the formulation of control measures. (C) 2022 The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases.

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