4.7 Review

Advances in multiplex molecular detection technologies for harmful algae

Journal

ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
Volume 29, Issue 29, Pages 43745-43757

Publisher

SPRINGER HEIDELBERG
DOI: 10.1007/s11356-022-20269-z

Keywords

Harmful algae; Multiplex PCR; Multiple quantitative PCR; Massively parallel sequencing; Gene chip; Antibody chip; Multiple isothermal amplification

Funding

  1. Shandong Provincial Natural Science Foundation, China [ZR2020MD081]
  2. National Scientific Foundation of China [31600309, 41476086]
  3. HIT Scientific Research Innovation Fund/the Fundamental Research Funds for the Central Universities [HIT.NSRIF.201702, HIT.NSRIF.201709]
  4. HIT Environment and Ecology Innovation Special Funds [HSCJ201622]

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As the eutrophication of natural water bodies worsens, harmful algal blooms (HABs) caused by harmful algae are becoming more frequent. HABs have become a global ecological problem that poses a serious threat to human health and food safety. It is crucial to establish methods for rapid detection of harmful algal species to provide early warning for HABs. Molecular biology techniques have provided new ideas for the detection of harmful algae and have become a research hotspot. However, current methods can only detect single harmful algal species at a time. Establishing methods for the simultaneous detection of multiple harmful algal species has become a new trend in molecular detection technology.
As the eutrophication of natural water bodies becomes more and more serious, the frequency of outbreaks of harmful algal blooms (HABs) mainly formed by harmful algae also increases. HABs have become a global ecological problem that poses a serious threat to human health and food safety. Therefore, it is extremely important to establish methods that can rapidly detect harmful algal species for early warning of HABs. The traditional morphology-based identification method is inefficient and inaccurate. In recent years, the rapid development of molecular biology techniques has provided new ideas for the detection of harmful algae and has become a research hotspot. The current molecular detection methods for harmful algal species mainly include fluorescence in situ hybridization, sandwich hybridization, and quantitative PCR (qPCR), but all of these methods can only detect single harmful algal species at a time. The establishment of methods for the simultaneous detection of multiple harmful algal species has become a new trend in the development of molecular detection technology because various harmful algal species may coexist in the natural water environment. The established molecular techniques for multiple detections of harmful algae mainly include gene chip, multiplex PCR, multiplex qPCR, massively parallel sequencing, antibody chip, and multiple isothermal amplification. This review mainly focuses on the principles, advantages and disadvantages, application progress, and application prospects of these multiple detection technologies, aiming at providing effective references not only for the fisheries but also for economic activities, environment, and human health.

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