4.6 Review

Facilitating Reforestation Through the Plant Microbiome: Perspectives from the Phyllosphere

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Phylogenetic conservatism of mycoparasitism and its contribution to pathogen antagonism

Edward G. Barge et al.

Summary: Closely related species are expected to have similar functional traits due to shared ancestry and phylogenetic inertia. This study found that the effect of Cladosporium endophytes on leaf rust disease severity is influenced by the phylogenetic relatedness among the species. However, it was also discovered that mechanisms operating independently of shared ancestry contribute to the endophyte's effects on disease severity, and these mechanisms are not necessarily phylogenetically conserved.

MOLECULAR ECOLOGY (2022)

Article Ecology

Conspecific leaf litter induces negative feedbacks in Asteraceae seedlings

Max M. Zaret et al.

Summary: The PSF framework helps understand the impact of soil microbes on plant fitness and species coexistence, while recent studies on PPFs provide insights into the effect of aboveground microbes on plant fitness and interactions. Results show that there are common negative litter-mediated PPFs among native Asteraceae species.

ECOLOGY (2021)

Review Plant Sciences

On tree longevity

Gianluca Piovesan et al.

Summary: Trees achieve longevity not through programmed senescence, but through specific life history traits and ecological support. Their growth plasticity and modularity are evolutionary advantages that contribute to their longevity. Identifying extremely old trees is crucial for landscape protection and updating ecological theories.

NEW PHYTOLOGIST (2021)

Article Multidisciplinary Sciences

Over half of western United States' most abundant tree species in decline

Hunter Stanke et al.

Summary: Research has shown that over half of the most abundant tree species in the western United States have experienced population declines in the last two decades, with subalpine tree species showing particularly severe decline, indicating significant changes in forest composition and structure.

NATURE COMMUNICATIONS (2021)

Article Biology

A fungal member of the Arabidopsis thaliana phyllosphere antagonizes Albugo laibachii via a GH25 lysozyme

Katharina Eitzen et al.

Summary: Studies have shown that an epiphytic yeast on wild Arabidopsis populations can reduce infection by a specific pathogen, with a GH25 hydrolase identified as a major effector in this microbial antagonism; these findings expand understanding of microbial interactions within the phyllosphere and offer insights for novel biocontrol strategies.

ELIFE (2021)

Article Multidisciplinary Sciences

Conspecific and heterospecific grass litter effects on seedling emergence and growth in ragwort (Jacobaea vulgaris)

Henrike Moehler et al.

Summary: The study demonstrates that the amount and composition of litter strongly impact the seedling emergence and growth of Jacobaea vulgaris. High litter amounts and conspecific litter negatively affect early seedling development in ragwort, but surviving seedlings accumulate more biomass and grow taller. Therefore, ragwort litter has negative effects on germination but positive effects on growth, and cannot be used as a management tool to reduce ragwort establishment and growth.

PLOS ONE (2021)

Article Environmental Sciences

Environmental drivers of forest biodiversity in temperate mixed forests - A multi-taxon approach

Flora Tinya et al.

Summary: The study explores the environmental drivers affecting multi-taxon biodiversity in forests, revealing the importance of factors such as tree species diversity, stand structure, and microclimate. Different environmental variables have varying influences on different organism groups, with higher tree species diversity contributing to increased overall species richness.

SCIENCE OF THE TOTAL ENVIRONMENT (2021)

Editorial Material Plant Sciences

New insight to the role of microbes in the methane exchange in trees: evidence from metagenomic sequencing

Anuliina Putkinen et al.

Summary: The exchange of methane (CH4) in tree stems and canopies and the processes involved are among the least understood components of the global CH4 cycle. Recent studies have focused on quantifying tree stems as sources of CH4 and understanding abiotic CH4 emissions in plant canopies, with the role of microbial in situ CH4 formation receiving less attention. The potential of novel metagenomic tools in revealing the involvement of microbes in the CH4 exchange of plants, including boreal trees, has been demonstrated.

NEW PHYTOLOGIST (2021)

Article Ecology

Restoration of the mycobiome of the endangered Hawaiian mint Phyllostegia kaalaensis increases its resistance to a common powdery mildew

Cameron P. Egan et al.

Summary: The study tested the efficacy of using potentially beneficial fungi to control disease resistance in endangered Hawaiian plant species. Results showed that foliar yeast Moesziomyces aphidis significantly reduced disease incidence, offering a new strategy for plant conservation practices.

FUNGAL ECOLOGY (2021)

Article Multidisciplinary Sciences

Amazonia as a carbon source linked to deforestation and climate change

Luciana Gatti et al.

Summary: Studies show that total carbon emissions are higher in eastern Amazonia compared to the western part, mainly due to fire emissions. Climate change and deforestation have led to increased ecosystem stress, more frequent fires, and higher carbon emissions in eastern Amazon.

NATURE (2021)

Article Agronomy

Adult plant resistance to white rust in Lunaria annua

Diana Cervantes et al.

Summary: Wild plants produce abundant seeds and seedlings, but most die before reaching maturity, often due to pathogens. Some individuals with major genes for resistance can become resistant, mature cohorts, while others exhibit adult plant resistance. Distinguishing between the two can be difficult in natural pathosystems with regular epidemics.

PHYTOPATHOLOGIA MEDITERRANEA (2021)

Review Biodiversity Conservation

Toward monitoring forest ecosystem integrity within the post-2020 Global Biodiversity Framework

Andrew J. Hansen et al.

Summary: The Signatory countries to the Convention on Biological Diversity are working towards formulating goals and indicators under the post-2020 Global Biodiversity Framework, with a focus on increasing the integrity of ecosystems. The CBD is seeking input on a quantifiable definition of integrity and methods to track it globally, particularly looking at using Earth observations to monitor and evaluate global forest ecosystem integrity. This proposed schema recommends eight potential indicators for monitoring ecosystem integrity globally and supporting nations in reporting progress towards implementing the post-2020 Global Biodiversity Framework.

CONSERVATION LETTERS (2021)

Article Plant Sciences

Mycobiome Transplant Increases Resistance to Austropuccinia psidii in an Endangered Hawaiian Plant

M. K. Chock et al.

Summary: The global spread of plant pathogens poses a threat to rare and endangered plants, with synthetic pesticides degrading leaf microbiome diversity. Beneficial microbes can enhance plant resistance, with whole-microbiome transplants showing promise in boosting plant health and disease resistance.

PHYTOBIOMES JOURNAL (2021)

Article Biodiversity Conservation

Co-introduction of native mycorrhizal fungi and plant seeds accelerates restoration of post-mining landscapes

Tanel Vahter et al.

JOURNAL OF APPLIED ECOLOGY (2020)

Article Multidisciplinary Sciences

A plant genetic network for preventing dysbiosis in the phyllosphere

Tao Chen et al.

NATURE (2020)

Article Biochemistry & Molecular Biology

Host Genotype and Colonist Arrival Order Jointly Govern Plant Microbiome Composition and Function

Devin R. Leopold et al.

CURRENT BIOLOGY (2020)

Article Ecology

A policy-driven framework for conserving the best of Earth's remaining moist tropical forests

Andrew J. Hansen et al.

NATURE ECOLOGY & EVOLUTION (2020)

Review Microbiology

Plant-microbiome interactions: from community assembly to plant health

Pankaj Trivedi et al.

NATURE REVIEWS MICROBIOLOGY (2020)

Article Biology

Pathogen resistance may be the principal evolutionary advantage provided by the microbiome

Michael R. McLaren et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2020)

Article Microbiology

Leaf Endophytes of Populus trichocarpa Act as Pathogens of Neighboring Plant Species

George Newcombe et al.

FRONTIERS IN MICROBIOLOGY (2020)

Article Green & Sustainable Science & Technology

The Number and Spatial Distribution of Forest-Proximate People Globally

Peter Newton et al.

ONE EARTH (2020)

Review Ecology

Variable retention harvesting in the Douglas-fir region

Jerry F. Franklin et al.

ECOLOGICAL PROCESSES (2020)

Review Plant Sciences

Plant microbiome-an account of the factors that shape community composition and diversity

Khondoker M. G. Dastogeer et al.

CURRENT PLANT BIOLOGY (2020)

Review Ecology

The Effect of Forest Management Options on Forest Resilience to Pathogens

Michaela Roberts et al.

FRONTIERS IN FORESTS AND GLOBAL CHANGE (2020)

Article Biodiversity Conservation

Cyanea kuhihewa: Rediscovering one of Hawai'i's rarest trees

Nina Ronsted et al.

PLANTS PEOPLE PLANET (2020)

Article Biochemistry & Molecular Biology

Genes involved in nonhost disease resistance as a key to engineer durable resistance in crops

Jose Pedro Fonseca et al.

PLANT SCIENCE (2019)

Article Multidisciplinary Sciences

Climatic controls of decomposition drive the global biogeography of forest-tree symbioses

B. S. Steidinger et al.

NATURE (2019)

Review Biochemistry & Molecular Biology

Making the Most of Trait-Based Approaches for Microbial Ecology

Genevieve Lajoie et al.

TRENDS IN MICROBIOLOGY (2019)

Article Microbiology

Microbiota-mediated disease resistance in plants

Nathan Vannier et al.

PLOS PATHOGENS (2019)

Article Environmental Sciences

The Role of Plant Litter in Driving Plant-Soil Feedbacks

G. F. (Ciska) Veen et al.

FRONTIERS IN ENVIRONMENTAL SCIENCE (2019)

Article Forestry

Litter impair spruce seedling emergence in beech forests: a litter manipulation experiment

Johan Asplund et al.

SCANDINAVIAN JOURNAL OF FOREST RESEARCH (2018)

Review Microbiology

Microbial interactions within the plant holobiont

M. Amine Hassani et al.

MICROBIOME (2018)

Review Multidisciplinary Sciences

The tropical forest carbon cycle and climate change

Edward T. A. Mitchard

NATURE (2018)

Review Plant Sciences

Origins of the Hawaiian flora: Phylogenies and biogeography reveal patterns of long-distance dispersal

Jonathan P. Price et al.

JOURNAL OF SYSTEMATICS AND EVOLUTION (2018)

Article Multidisciplinary Sciences

Leaf bacterial diversity mediates plant diversity and ecosystem function relationships

Isabelle Laforest-Lapointe et al.

NATURE (2017)

Article Biology

Exposure to the leaf litter microbiome of healthy adults protects seedlings from pathogen damage

Natalie Christian et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2017)

Letter Multidisciplinary Sciences

Benefits of trees in tropical cities

Xiao Ping Song et al.

SCIENCE (2017)

Article Multidisciplinary Sciences

Plant diversity increases with the strength of negative density dependence at the global scale

Joseph A. LaManna et al.

SCIENCE (2017)

Article Multidisciplinary Sciences

High resolution analysis of tropical forest fragmentation and its impact on the global carbon cycle

Katharina Brinck et al.

NATURE COMMUNICATIONS (2017)

Article Environmental Sciences

Global risk of deadly heat

Camilo Mora et al.

NATURE CLIMATE CHANGE (2017)

Article Plant Sciences

Common foliar fungi of Populus trichocarpa modify Melampsora rust disease severity

Posy E. Busby et al.

NEW PHYTOLOGIST (2016)

Article Biochemistry & Molecular Biology

Fungal endophytes: modifiers of plant disease

Posy E. Busby et al.

PLANT MOLECULAR BIOLOGY (2016)

Article Plant Sciences

Vertical stratification of the foliar fungal community in the world's tallest trees

Joshua G. Harrison et al.

AMERICAN JOURNAL OF BOTANY (2016)

Review Ecology

Maintenance of Plant Species Diversity by Pathogens

James D. Bever et al.

ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 46 (2015)

Article Genetics & Heredity

Crop-destroying fungal and oomycete pathogens challenge food security

Daniel P. Bebber et al.

FUNGAL GENETICS AND BIOLOGY (2015)

Article Multidisciplinary Sciences

Mapping tree density at a global scale

T. W. Crowther et al.

NATURE (2015)

Review Plant Sciences

Mycorrhizal ecology and evolution: the past, the present, and the future

Marcel G. A. van der Heijden et al.

NEW PHYTOLOGIST (2015)

News Item Plant Sciences

First Report of Ceratocystis Wilt on 'Ohia (Metrosideros polymorpha).

L. M. Keith et al.

PLANT DISEASE (2015)

Review Plant Sciences

Induced Systemic Resistance by Beneficial Microbes

Corne M. J. Pieterse et al.

ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 52 (2014)

Article Forestry

Genetic considerations in ecosystem restoration using native tree species

Evert Thomas et al.

FOREST ECOLOGY AND MANAGEMENT (2014)

Article Multidisciplinary Sciences

Endemism and functional convergence across the North American soil mycobiome

Jennifer M. Talbot et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Editorial Material Biology

On the generality of cascading habitat-formation

Mads Solgaard Thomsen et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2014)

Article Ecology

Hidden Costs of Passive Restoration

Rakan A. Zahawi et al.

RESTORATION ECOLOGY (2014)

Editorial Material Forestry

Carbon storage in trees: pathogens have their say

Jordi Martinez-Vilalta

TREE PHYSIOLOGY (2014)

Article Plant Sciences

The contribution of foliar endophytes to quantitative resistance to Melampsora rust

Anil K. H. Raghavendra et al.

NEW PHYTOLOGIST (2013)

Article Ecology

Pathogen regulation of plant diversity via effective specialization

Maria-Soledad Benitez et al.

TRENDS IN ECOLOGY & EVOLUTION (2013)

Article Plant Sciences

HOST AND GEOGRAPHIC STRUCTURE OF ENDOPHYTIC AND ENDOLICHENIC FUNGI AT A CONTINENTAL SCALE

Jana M. U'Ren et al.

AMERICAN JOURNAL OF BOTANY (2012)

Review Biochemistry & Molecular Biology

Mycorrhiza-Induced Resistance and Priming of Plant Defenses

Sabine C. Jung et al.

JOURNAL OF CHEMICAL ECOLOGY (2012)

Article Multidisciplinary Sciences

Fungal endophyte communities reflect environmental structuring across a Hawaiian landscape

Naupaka B. Zimmerman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Ecology

Inoculation with a Native Soil Community Advances Succession in a Grassland Restoration

Elizabeth L. Middleton et al.

RESTORATION ECOLOGY (2012)

Review Plant Sciences

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

Andrea Porras-Alfaro et al.

ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 49 (2011)

Article Ecology

Nurse-plant and mulching effects on three conifer species in a Mexican temperate forest

Arnulfo Blanco-Garcia et al.

ECOLOGICAL ENGINEERING (2011)

Article Ecology

Soil microbes drive the classic plant diversity-productivity pattern

Stefan A. Schnitzer et al.

ECOLOGY (2011)

Review Agronomy

Climate change and forest diseases

R. N. Sturrock et al.

PLANT PATHOLOGY (2011)

Article Multidisciplinary Sciences

Negative plant-soil feedback predicts tree-species relative abundance in a tropical forest

Scott A. Mangan et al.

NATURE (2010)

Review Plant Sciences

Fungal endophytes: diversity and functional roles

R. J. Rodriguez et al.

NEW PHYTOLOGIST (2009)

Article Forestry

Endophyte-mediated resistance against white pine blister rust in Pinus monticola

Rebecca J. Ganley et al.

FOREST ECOLOGY AND MANAGEMENT (2008)

Article Ecology

Stress tolerance in plants via habitat-adapted symbiosis

Rusty J. Rodriguez et al.

ISME JOURNAL (2008)

Article Biology

Progressive island colonization and ancient origin of Hawaiian Metrosideros (Myrtaceae)

Diana M. Percy et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)

Article Biodiversity Conservation

PANDO LIVES: MOLECULAR GENETIC EVIDENCE OF A GIANT ASPEN CLONE IN CENTRAL UTAH

Jennifer DeWoody et al.

WESTERN NORTH AMERICAN NATURALIST (2008)

Review Microbiology

Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution

Ilana Zilber-Rosenberg et al.

FEMS MICROBIOLOGY REVIEWS (2008)

Article Mycology

Fungal endophytes in seeds and needles of Pinus monticola

Rebecca J. Ganley et al.

MYCOLOGICAL RESEARCH (2006)

Article Biotechnology & Applied Microbiology

Improvement of the fungal biocontrol agent Trichoderma atroviride to enhance both antagonism and induction of plant systemic disease resistance

K Brunner et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Review Biotechnology & Applied Microbiology

Use of plant growth-promoting bacteria for biocontrol of plant diseases: Principles, mechanisms of action, and future prospects

S Compant et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Multidisciplinary Sciences

A community of unknown, endophytic fungi in western white pine

RJ Ganley et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Multidisciplinary Sciences

Fungal endophytes limit pathogen damage in a tropical tree

AE Arnold et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Multidisciplinary Sciences

Release of invasive plants from fungal and viral pathogens

CE Mitchell et al.

NATURE (2003)