4.7 Article

Ensembles of Deep Learning Architectures for the Early Diagnosis of the Alzheimer's Disease

Journal

INTERNATIONAL JOURNAL OF NEURAL SYSTEMS
Volume 26, Issue 7, Pages -

Publisher

WORLD SCIENTIFIC PUBL CO PTE LTD
DOI: 10.1142/S0129065716500258

Keywords

Deep learning; ensemble; Alzheimer's disease classification

Funding

  1. MINECO [TEC2012-34306, TEC2015-64718-R, PSI2015-65848-R]
  2. Consejeria de Innovacion, Ciencia y Empresa (Junta de Andalucia, Spain) [P09-TIC-4530, P11-TIC-7103]
  3. Universidad de Malaga
  4. Programa de fortalecimiento de las capacidades de I+D+I en las Universidades, de la Consejeria de Economia, Innovacion, Ciencia y Empleo, cofinanciado por el fondo europeo de desarrollo regional (FEDER) [FC14-SAF30]
  5. Alzheimer's Disease Neuroimaging Initiative (ADNI) (National Institutes of Health) [U01 AG024904]
  6. DOD ADNI (Department of Defense) [W81XWH-12-2-0012]
  7. National Institute on Aging
  8. National Institute of Biomedical Imaging and Bioengineering
  9. Canadian Institutes of Health Research

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Computer Aided Diagnosis (CAD) constitutes an important tool for the early diagnosis of Alzheimer's Disease (AD), which, in turn, allows the application of treatments that can be simpler and more likely to be effective. This paper explores the construction of classification methods based on deep learning architectures applied on brain regions defined by the Automated Anatomical Labeling (AAL). Gray Matter (GM) images from each brain area have been split into 3D patches according to the regions defined by the AAL atlas and these patches are used to train different deep belief networks. An ensemble of deep belief networks is then composed where the final prediction is determined by a voting scheme. Two deep learning based structures and four different voting schemes are implemented and compared, giving as a result a potent classification architecture where discriminative features are computed in an unsupervised fashion. The resulting method has been evaluated using a large dataset from the Alzheimer's disease Neuroimaging Initiative (ADNI). Classification results assessed by cross-validation prove that the proposed method is not only valid for differentiate between controls (NC) and AD images, but it also provides good performances when tested for the more challenging case of classifying Mild Cognitive Impairment (MCI) Subjects. In particular, the classification architecture provides accuracy values up to 0.90 and AUC of 0.95 for NC/AD classification, 0.84 and AUC of 0.91 for stable MCI/AD classification and 0.83 and AUC of 0.95 for NC/MCI converters classification.

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