4.7 Article

Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation

Journal

ISCIENCE
Volume 24, Issue 12, Pages -

Publisher

CELL PRESS
DOI: 10.1016/j.isci.2021.103406

Keywords

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Funding

  1. U.S. Department of Defense [W81XWH-16-1-0042, W911NF-19-2-0026]
  2. National Institutes of Health [U01-CA2157 98]
  3. Aclaris Pharmaceuticals
  4. Crohn's and Colitis Foundation of America

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Inflammatory bowel diseases (IBDs) are genetically complex and exhibit significant inter-patient heterogeneity. Mouse models of IBD show varied responses to MK2 inhibition, with MK2 suppressing inflammation by targeting inflammatory cells. Using a computational approach, researchers identified IBD patient subgroups predicted to respond to MK2 inhibition, which can aid in identifying which patients will benefit from new therapies.
Inflammatory bowel diseases (IBDs) are genetically complex and exhibit significant inter-patient heterogeneity in disease presentation and therapeutic response. Here, we show that mouse models of IBD exhibit variable responses to inhibition of MK2, a pro-inflammatory serine/threonine kinase, and that MK2 suppresses inflammation by targeting inflammatory monocytes and neutrilphils in murine models. Using a computational approach (TransComp-R) that allows for cross-species comparison of transcriptomic features, we identified an IBD patient subgroup that is predicted to respond to MK2 inhibition, and an independent preclinical model of chronic intestinal inflammation predicted to be non-responsive, which we validated experimentally. Thus, cross-species mouse-human translation approaches can help to identify patient subpopulations in which to deploy new therapies.

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