4.5 Article

Phytoplankton antioxidant systems and their contributions to cellular elemental stoichiometry

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

Bistability in oxidative stress response determines the migration behavior of phytoplankton in turbulence

Francesco Carrara et al.

Summary: This study reveals that the switch in migration direction of the marine raphidophyte Heterosigma akashiwo under turbulence is due to the integration of reactive oxygen species signaling. Exposure of cells to exogenous stressors can also lead to ROS accumulation and the split into two subpopulations. This mechanistic link between single-cell mechanics and population-scale migratory response contributes to the understanding of phytoplankton community composition in future ocean conditions.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2021)

Article Limnology

Taxonomic and nutrient controls on phytoplankton iron quotas in the ocean

Benjamin S. Twining et al.

Summary: Iron quotas of phytoplankton vary significantly across nutrient gradients and geographic locations, influenced by taxonomic and macronutrient controls. Luxury uptake of iron is common in the low-iron Pacific Ocean, particularly among diatoms.

LIMNOLOGY AND OCEANOGRAPHY LETTERS (2021)

Article Multidisciplinary Sciences

Manganese co-limitation of phytoplankton growth and major nutrient drawdown in the Southern Ocean

Thomas J. Browning et al.

Summary: The text discusses the issue of residual nutrients in the Southern Ocean, emphasizing the importance of manganese in influencing the marine ecosystem and nutrient cycling. Experimental results show that manganese plays a key role in controlling phytoplankton growth, particularly in the central Drake Passage.

NATURE COMMUNICATIONS (2021)

Article Biochemistry & Molecular Biology

Spurious regulatory connections dictate the expression-fitness landscape of translation factors

Jean-Benoit Lalanne et al.

Summary: During steady-state cell growth, the relationship between individual enzymatic fluxes and growth rate can be inferred through mass conservation, but perturbing the flux and expression of enzymes may lead to unpredictable distal regulatory responses that affect cell fitness.

MOLECULAR SYSTEMS BIOLOGY (2021)

Article Biochemical Research Methods

ThermoRawFileParser: Modular, Scalable, and Cross-Platform RAW File Conversion

Niels Hulstaert et al.

JOURNAL OF PROTEOME RESEARCH (2020)

Article Microbiology

Yeasts collectively extend the limits of habitable temperatures by secreting glutathione

Diederik S. Laman Trip et al.

NATURE MICROBIOLOGY (2020)

Article Biochemistry & Molecular Biology

Growth-Optimized Aminoacyl-tRNA Synthetase Levels Prevent Maximal tRNA Charging

Darren J. Parker et al.

CELL SYSTEMS (2020)

Article Multidisciplinary Sciences

The proteome landscape of the kingdoms of life

Johannes B. Mueller et al.

NATURE (2020)

Article Biochemistry & Molecular Biology

Functional assessment of microbial superoxide dismutase isozymes suggests a differential role for each isozyme

Hastyar Najmuldeen et al.

FREE RADICAL BIOLOGY AND MEDICINE (2019)

Article Multidisciplinary Sciences

Adaptive evolution reveals a tradeoff between growth rate and oxidative stress during naphthoquinone-based aerobic respiration

Amitesh Anand et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Review Microbiology

Where in the world do bacteria experience oxidative stress?

James A. Imlay

ENVIRONMENTAL MICROBIOLOGY (2019)

Article Multidisciplinary Sciences

Responses of unicellular predators to cope with the phototoxicity of photosynthetic prey

Akihiro Uzuka et al.

NATURE COMMUNICATIONS (2019)

Review Biochemistry & Molecular Biology

Catalase and its mysteries

Hessam Sepasi Tehrani et al.

PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY (2018)

Article Biology

Why antioxidant therapies have failed in clinical trials

Adrian M. Davies et al.

JOURNAL OF THEORETICAL BIOLOGY (2018)

Article Biochemical Research Methods

Targeted Feature Detection for Data-Dependent Shotgun Proteomics

Hendrik Weisser et al.

JOURNAL OF PROTEOME RESEARCH (2017)

Article Multidisciplinary Sciences

Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus

Thomas Mock et al.

NATURE (2017)

Article Geosciences, Multidisciplinary

Silicon and zinc biogeochemical cycles coupled through the Southern Ocean

Derek Vance et al.

NATURE GEOSCIENCE (2017)

Article Multidisciplinary Sciences

Escherichia coli cytochrome c peroxidase is a respiratory oxidase that enables the use of hydrogen peroxide as a terminal electron acceptor

Maryam Khademian et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Review Plant Sciences

ROS Are Good

Ron Mittler

TRENDS IN PLANT SCIENCE (2017)

Article Biotechnology & Applied Microbiology

The quantitative and condition-dependent Escherichia coli proteome

Alexander Schmidt et al.

NATURE BIOTECHNOLOGY (2016)

Review Biochemistry & Molecular Biology

Distribution and Features of the Six Classes of Peroxiredoxins

Leslie B. Poole et al.

MOLECULES AND CELLS (2016)

Article Biochemical Research Methods

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

Hannes L. Roest et al.

NATURE METHODS (2016)

Article Multidisciplinary Sciences

The fate of photons absorbed by phytoplankton in the global ocean

Hanzhi Lin et al.

SCIENCE (2016)

Article Biochemistry & Molecular Biology

A primer on peroxiredoxin biochemistry

P. Andrew Karplus

FREE RADICAL BIOLOGY AND MEDICINE (2015)

Article Biochemistry & Molecular Biology

Protein Quality Control under Oxidative Stress Conditions

Jan-Ulrik Dahl et al.

JOURNAL OF MOLECULAR BIOLOGY (2015)

Article Multidisciplinary Sciences

Contingency and entrenchment in protein evolution under purifying selection

Premal Shah et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Review Biochemistry & Molecular Biology

Nickel-dependent metalloenzymes

Jodi L. Boer et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2014)

Review Chemistry, Multidisciplinary

Superoxide Dismutases and Superoxide Reductases

Yuewei Sheng et al.

CHEMICAL REVIEWS (2014)

Article Biochemistry & Molecular Biology

Structure of the monofunctional heme catalase DR1998 from Deinococcus radiodurans

Patricia T. Borges et al.

FEBS JOURNAL (2014)

Review Biochemistry & Molecular Biology

The Mismetallation of Enzymes during Oxidative Stress

James A. Imlay

JOURNAL OF BIOLOGICAL CHEMISTRY (2014)

Article Multidisciplinary Sciences

Mapping the diatom redox-sensitive proteome provides insight into response to nitrogen stress in the marine environment

Shilo Rosenwasser et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Review Geochemistry & Geophysics

The Trace Metal Composition of Marine Phytoplankton

Benjamin S. Twining et al.

ANNUAL REVIEW OF MARINE SCIENCE, VOL 5 (2013)

Article Biochemical Research Methods

An Automated Pipeline for High-Throughput Label-Free Quantitative Proteomics

Hendrik Weisser et al.

JOURNAL OF PROTEOME RESEARCH (2013)

Article Biochemical Research Methods

Pyteomics-a Python Framework for Exploratory Data Analysis and Rapid Software Prototyping in Proteomics

Anton A. Goloborodko et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2013)

Article Biochemistry & Molecular Biology

Superoxide poisons mononuclear iron enzymes by causing mismetallation

Mianzhi Gu et al.

MOLECULAR MICROBIOLOGY (2013)

Article Geosciences, Multidisciplinary

The acceleration of oceanic denitrification during deglacial warming

Eric D. Galbraith et al.

NATURE GEOSCIENCE (2013)

Article Multidisciplinary Sciences

Diatom Proteomics Reveals Unique Acclimation Strategies to Mitigate Fe Limitation

Brook L. Nunn et al.

PLOS ONE (2013)

Review Plant Sciences

Missing links in understanding redox signaling via thiol/disulfide modulation: how is glutathione oxidized in plants?

Marie-Sylviane Rahantaniaina et al.

FRONTIERS IN PLANT SCIENCE (2013)

Review Biochemistry & Molecular Biology

Molecular evolution of hydrogen peroxide degrading enzymes

Marcel Zamocky et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2012)

Review Biochemistry & Molecular Biology

Why do bacteria use so many enzymes to scavenge hydrogen peroxide?

Surabhi Mishra et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2012)

Review Biochemistry & Molecular Biology

Superoxide dismutases: Ancient enzymes and new insights

Anne-Frances Miller

FEBS LETTERS (2012)

Article Environmental Sciences

Role of diatoms in nickel biogeochemistry in the ocean

Benjamin S. Twining et al.

GLOBAL BIOGEOCHEMICAL CYCLES (2012)

Review Biochemistry & Molecular Biology

Battles with Iron: Manganese in Oxidative Stress Protection

J. Dafhne Aguirre et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Article Biochemistry & Molecular Biology

Mononuclear Iron Enzymes Are Primary Targets of Hydrogen Peroxide Stress

Adil Anjem et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Article Limnology

Iron-light interactions differ in Southern Ocean phytoplankton

Robert F. Strzepek et al.

LIMNOLOGY AND OCEANOGRAPHY (2012)

Article Multidisciplinary Sciences

Peroxiredoxins are conserved markers of circadian rhythms

Rachel S. Edgar et al.

NATURE (2012)

Article Plant Sciences

Chemical Quenching of Singlet Oxygen by Carotenoids in Plants

Fanny Ramel et al.

PLANT PHYSIOLOGY (2012)

Article Multidisciplinary Sciences

Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability

Adrian Marchetti et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Oceanography

Dissolved manganese in the Atlantic sector of the Southern Ocean

R. Middag et al.

DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2011)

Article Multidisciplinary Sciences

Thiol peroxidases mediate specific genome-wide regulation of gene expression in response to hydrogen peroxide

Dmitri E. Fomenko et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Review Plant Sciences

ROS signaling: the new wave?

Ron Mittler et al.

TRENDS IN PLANT SCIENCE (2011)

Review Biochemistry & Molecular Biology

Mechanisms of catalase activity of heme peroxidases

Jutta Vlasits et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2010)

Article Ecology

Biological stoichiometry from genes to ecosystems

J.J. Elser et al.

ECOLOGY LETTERS (2010)

Article Engineering, Environmental

Hydrogen Peroxide Photocycling in the Gulf of Aqaba, Red Sea

Yeala Shaked et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2010)

Review Plant Sciences

Catalase function in plants: a focus on Arabidopsis mutants as stress-mimic models

Amna Mhamdi et al.

JOURNAL OF EXPERIMENTAL BOTANY (2010)

Article Chemistry, Multidisciplinary

Vitamin B12 and Redox Homeostasis: Cob(II)alamin Reacts with Superoxide at Rates Approaching Superoxide Dismutase (SOD)

Edward Suarez-Moreira et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)

Article Multidisciplinary Sciences

Ferritin is used for iron storage in bloom-forming marine pennate diatoms

Adrian Marchetti et al.

NATURE (2009)

Review Plant Sciences

Singlet oxygen in plants: production, detoxification and signaling

Christian Triantaphylides et al.

TRENDS IN PLANT SCIENCE (2009)

Review Biochemistry & Molecular Biology

Evolution of catalases from bacteria to humans

Marcel Zamocky et al.

ANTIOXIDANTS & REDOX SIGNALING (2008)

Article Chemistry, Multidisciplinary

Manganous phosphate acts as a superoxide dismutase

Kevin Barnese et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)

Review Multidisciplinary Sciences

The microbial engines that drive Earth's biogeochemical cycles

Paul G. Falkowski et al.

SCIENCE (2008)

Article Plant Sciences

Localization and role of manganese superoxide dismutase in a marine diatom

Felisa Wolfe-Simon et al.

PLANT PHYSIOLOGY (2006)

Article Ecology

Temperature dependence of superoxide dismutase activity in plankton

Alexander Perelman et al.

JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY (2006)

Article Plant Sciences

Singlet oxygen and photo-oxidative stress management in plants and algae

HK Ledford et al.

PLANT CELL AND ENVIRONMENT (2005)

Review Plant Sciences

The role and evolution of superoxide dismutases in algae

F Wolfe-Simon et al.

JOURNAL OF PHYCOLOGY (2005)

Article Limnology

A role for manganese in superoxide dismutases and growth of iron-deficient diatoms

G Peers et al.

LIMNOLOGY AND OCEANOGRAPHY (2004)

Article Limnology

Diurnal cycling of glutathione in marine phytoplankton: Field and culture studies

CL Dupont et al.

LIMNOLOGY AND OCEANOGRAPHY (2004)

Review Plant Sciences

Reactive oxygen gene network of plants

R Mittler et al.

TRENDS IN PLANT SCIENCE (2004)

Review Microbiology

Zn, Cu and Co in cyanobacteria: selective control of metal availability

JS Cavet et al.

FEMS MICROBIOLOGY REVIEWS (2003)

Article Multidisciplinary Sciences

Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling

ZA Wood et al.

SCIENCE (2003)

Article Biochemistry & Molecular Biology

Biochemical characterization of a membrane-bound manganese-containing superoxide dismutase from the cyanobacterium Anabaena PCC 7120

G Regelsberger et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2002)

Article Multidisciplinary Sciences

An antioxidant function for DMSP and DMS in marine algae

W Sunda et al.

NATURE (2002)

Review Plant Sciences

Redfield revisited:: variability of C:N:P in marine microalgae and its biochemical basis

RJ Geider et al.

EUROPEAN JOURNAL OF PHYCOLOGY (2002)

Article Microbiology

Hydrogen peroxide fluxes and compartmentalization inside growing Escherichia coli

LC Seaver et al.

JOURNAL OF BACTERIOLOGY (2001)