Related references
Note: Only part of the references are listed.The landscape of accessible chromatin in bovine oocytes and early embryos
Hao Ming et al.
EPIGENETICS (2021)
A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
Yunxia Zhao et al.
NATURE COMMUNICATIONS (2021)
Chromatin accessibility and regulatory vocabulary across indicine cattle tissues
Pamela A. Alexandre et al.
GENOME BIOLOGY (2021)
Systematic alteration of ATAC-seq for profiling open chromatin in cryopreserved nuclei preparations from livestock tissues
M. M. Halstead et al.
SCIENTIFIC REPORTS (2020)
Profiling of chromatin accessibility and identification of general cis-regulatory mechanisms that control two ocular lens differentiation pathways
Yilin Zhao et al.
EPIGENETICS & CHROMATIN (2019)
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
Yingyao Zhou et al.
NATURE COMMUNICATIONS (2019)
Genome-wide association study reveals dynamic role of genetic variation in infant and early childhood growth
Oyvind Helgeland et al.
NATURE COMMUNICATIONS (2019)
Genome-wide analysis reveals the effects of artificial selection on production and meat quality traits in Qinchuan cattle
Chugang Mei et al.
GENOMICS (2019)
Changes in chromatin accessibility between Arabidopsis stem cells and mesophyll cells illuminate cell type-specific transcription factor networks
Paja Sijacic et al.
PLANT JOURNAL (2018)
Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds
Marina Naval-Sanchez et al.
NATURE COMMUNICATIONS (2018)
An intercross population study reveals genes associated with body size and plumage color in ducks
Zhengkui Zhou et al.
NATURE COMMUNICATIONS (2018)
Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics, and epigenetics data
Quan H. Nguyen et al.
GIGASCIENCE (2018)
SP and KLF Transcription Factors in Digestive Physiology and Diseases
Chang-Kyung Kim et al.
GASTROENTEROLOGY (2017)
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
M. Ryan Corces et al.
NATURE METHODS (2017)
Mef2 and the skeletal muscle differentiation program
Michael V. Taylor et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2017)
Putative enhancer sites in the bovine genome are enriched with variants affecting complex traits
Min Wang et al.
GENETICS SELECTION EVOLUTION (2017)
A Natural Allele of a Transcription Factor in Rice Confers Broad-Spectrum Blast Resistance
Weitao Li et al.
CELL (2017)
Fatty acid composition of chicken breast meat is dependent on genotype-related variation of FADS1 and FADS2 gene expression and desaturating activity
E. Boschetti et al.
ANIMAL (2016)
PLAG1 and NCAPG-LCORL in livestock
Akiko Takasuga
ANIMAL SCIENCE JOURNAL (2016)
Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution
Hannah K. Long et al.
CELL (2016)
The landscape of accessible chromatin in mammalian preimplantation embryos
Jingyi Wu et al.
NATURE (2016)
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing
Xingqi Chen et al.
NATURE METHODS (2016)
Identification of MEF2B and TRHDE Gene Polymorphisms Related to Growth Traits in a New Ujumqin Sheep Population
Li Zhang et al.
PLOS ONE (2016)
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
Guangchuang Yu et al.
BIOINFORMATICS (2015)
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project
Leif Andersson et al.
GENOME BIOLOGY (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Obesity-associated variants within FTO form long-range functional connections with IRX3
Scott Smemo et al.
NATURE (2014)
Requirement of MEF2A, C, and D for skeletal muscle regeneration
Ning Liu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Chromatin accessibility: a window into the genome
Maria Tsompana et al.
EPIGENETICS & CHROMATIN (2014)
The extent of linkage disequilibrium in beef cattle breeds using high-density SNP genotypes
Laercio R. Porto-Neto et al.
GENETICS SELECTION EVOLUTION (2014)
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
Jason D. Buenrostro et al.
NATURE METHODS (2013)
Expression Levels of LCORL Are Associated with Body Size in Horses
Julia Metzger et al.
PLOS ONE (2013)
ZBTB33 binds unmethylated regions of the genome associated with actively expressed genes
Adam Blattler et al.
EPIGENETICS & CHROMATIN (2013)
Software for Computing and Annotating Genomic Ranges
Michael Lawrence et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
Contributions of FASN and SCD gene polymorphisms on fatty acid composition in muscle from Japanese Black cattle
S. Yokota et al.
ANIMAL GENETICS (2012)
An HMGA2-IGF2BP2 Axis Regulates Myoblast Proliferation and Myogenesis
Zhizhong Li et al.
DEVELOPMENTAL CELL (2012)
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
Stephen G. Landt et al.
GENOME RESEARCH (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
MEASURING REPRODUCIBILITY OF HIGH-THROUGHPUT EXPERIMENTS
Qunhua Li et al.
ANNALS OF APPLIED STATISTICS (2011)
A functional family-wide screening of SP/KLF proteins identifies a subset of suppressors of KRAS-mediated cell growth
Martin E. Fernandez-Zapico et al.
BIOCHEMICAL JOURNAL (2011)
The Arrestin Domain-Containing 3 Protein Regulates Body Mass and Energy Expenditure
Parth Patwari et al.
CELL METABOLISM (2011)
ERK5 Regulates Muscle Cell Fusion through Klf Transcription Factors
Kazunori Sunadome et al.
DEVELOPMENTAL CELL (2011)
A high-resolution map of human evolutionary constraint using 29 mammals
Kerstin Lindblad-Toh et al.
NATURE (2011)
Cattle gain stature
Peter M. Visscher et al.
NATURE GENETICS (2011)
Variants modulating the expression of a chromosome domain encompassing PLAG1 influence bovine stature
Latifa Karim et al.
NATURE GENETICS (2011)
GREAT improves functional interpretation of cis-regulatory regions
Cory Y. McLean et al.
NATURE BIOTECHNOLOGY (2010)
rtracklayer: an R package for interfacing with genome browsers
Michael Lawrence et al.
BIOINFORMATICS (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Bili Inhibits Wnt/β-Catenin Signaling by Regulating the Recruitment of Axin to LRP6
Lorna S. Kategaya et al.
PLOS ONE (2009)
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang et al.
GENOME BIOLOGY (2008)
Kruppel-like Factors (KLFs) in muscle biology
Saptarsi M. Haldar et al.
JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY (2007)
A mutation creating a potential illegitimate microRNA target site in the myostatin gene affects muscularity in sheep
Alex Clop et al.
NATURE GENETICS (2006)
Sp1- and Sp3-mediated transcriptional regulation of the fibroblast growth factor receptor 1 gene in chicken skeletal muscle cells
R Parakati et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Share Paper
