4.6 Article

Differentiation of Brain Abscess From Cystic Glioma Using Conventional MRI Based on Deep Transfer Learning Features and Hand-Crafted Radiomics Features

Journal

FRONTIERS IN MEDICINE
Volume 8, Issue -, Pages -

Publisher

FRONTIERS MEDIA SA
DOI: 10.3389/fmed.2021.748144

Keywords

brain abscess; deep transfer learning; radiomics; convolutional neural network; cystic glioma

Funding

  1. National Nature Science Foundation of China [82073893, 81873635, 81703622, 81472693]
  2. China Postdoctoral Science Foundation [2018M63302]
  3. Natural Science Foundation of Hunan Province [2018JJ3838, 2018SK2101]
  4. Hunan Provincial Health and Health Committee Foundation of China [C2019186]
  5. Xiangya Hospital Central South University postdoctoral foundation
  6. National Natural Science Foundation of China [61971271]
  7. Taishan Scholars Project of Shandong Province [Tsqn20161023]
  8. Primary Research
  9. Development Plan of Shandong Province [2018GGX101018, 2019QYTPY020]

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By combining deep transfer learning and hand-crafted radiomics features, a model has been developed and validated to distinguish brain abscess from cystic glioma. The model shows efficient performance in differential diagnosis and is a non-invasive and cost-effective method.
Objectives: To develop and validate the model for distinguishing brain abscess from cystic glioma by combining deep transfer learning (DTL) features and hand-crafted radiomics (HCR) features in conventional T1-weighted imaging (T1WI) and T2-weighted imaging (T2WI).Methods: This single-center retrospective analysis involved 188 patients with pathologically proven brain abscess (102) or cystic glioma (86). One thousand DTL and 105 HCR features were extracted from the T1WI and T2WI of the patients. Three feature selection methods and four classifiers, such as k-nearest neighbors (KNN), random forest classifier (RFC), logistic regression (LR), and support vector machine (SVM), for distinguishing brain abscess from cystic glioma were compared. The best feature combination and classifier were chosen according to the quantitative metrics including area under the curve (AUC), Youden Index, and accuracy.Results: In most cases, deep learning-based radiomics (DLR) features, i.e., DTL features combined with HCR features, contributed to a higher accuracy than HCR and DTL features alone for distinguishing brain abscesses from cystic gliomas. The AUC values of the model established, based on the DLR features in T2WI, were 0.86 (95% CI: 0.81, 0.91) in the training cohort and 0.85 (95% CI: 0.75, 0.95) in the test cohort, respectively.Conclusions: The model established with the DLR features can distinguish brain abscess from cystic glioma efficiently, providing a useful, inexpensive, convenient, and non-invasive method for differential diagnosis. This is the first time that conventional MRI radiomics is applied to identify these diseases. Also, the combination of HCR and DTL features can lead to get impressive performance.

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