4.6 Article

Semirapid Detection of Piperacillin/Tazobactam Resistance and Extended-Spectrum Resistance to β-Lactams/β-Lactamase Inhibitors in Clinical Isolates of Escherichia coli

Journal

MICROBIOLOGY SPECTRUM
Volume 9, Issue 2, Pages -

Publisher

AMER SOC MICROBIOLOGY
DOI: 10.1128/Spectrum.00801-21

Keywords

ESRI; Escherichia coli; beta-lactamase; beta-lactamase inhibitor; piperacillin; resistance; tazobactam

Categories

Funding

  1. Instituto de Salud Carlos III, Proyectos de Investigacion en Salud [PI19/01009]
  2. Instituto de Salud Carlos III, Subdireccion General de Redes y Centros de Investigacion Cooperativa, Ministerio de Ciencia e Innovacion
  3. Spanish Network for Research in Infectious Diseases [REIPI RD16/0016/0009]
  4. European Development Regional Fund A way to achieve Europe, operative program Intelligent Growth 2014-2020
  5. subprograma Miguel Servet Tipo II, Instituto de Salud Carlos III, Subdireccion General de Redes y Centros de Investigacion Cooperativa, Ministerio de Ciencia e Innovacion, Spain [CP20/00018]
  6. subprograma Juan Rodes, Instituto de Salud Carlos III, Subdireccion General de Redes y Centros de Investigacion Cooperativa, Ministerio de Ciencia, Innovacion y Universidades, Spain [JR20/00023]
  7. Plan Nacional de I1D1i 20132016

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A method for detecting TZP resistance and ESRI in E. coli was designed and validated, showing great efficacy in detecting TZP-intermediate or -resistant isolates and TZP-susceptible isolates with the capacity for ESRI development. The method could potentially reduce health costs, ineffective treatments, and inappropriate antibiotic use.
Piperacillin/tazobactam (TZP) is a beta-lactam/beta-lactamase inhibitor (BL/BLI) recommended for the empirical treatment of severe infections. The excessive and indiscriminate use of TZP has promoted the emergence of TZP-resistant Escherichia coli isolates. Recently, we demonstrated that TZP may contribute to the development of extended-spectrum resistance to BL/BLI (ESRI) in E. coli isolates that are TZP susceptible but have low-level resistance to BL/BLI (resistance to amoxicillin/clavulanic acid [AMC] and/or ampicillin/sulbactam [SAM]). This raises the need for the development of rapid detection systems. Therefore, the objective of this study was to design and validate a method able to detect TZP resistance and ESRI in E. coli. A colorimetric assay based on beta-lactam ring hydrolysis by beta-lactamases was designed (ESRI test). A total of 114 E. coli isolates from bloodstream and intra-abdominal sources, characterized according to their susceptibility profiles to BL/BLI, were used. Detection of the three most frequent beta-lactamases involved in BL/BLI resistance (bla(TEM), bla(OXA-1), and bla(SHV)) was performed by PCR. The ESRI test was able to detect all the TZP-intermediate/-resistant isolates, as well as all the TZP-susceptible isolates with a capacity for ESRI development. Their median times to results were 5 and 30 min, respectively. All the isolates without resistance to BL/BLI displayed a negative result in the ESRI test. bla(TEM) was the most frequent beta-lactamase gene detected, follow by blaSHV and bla(OXA-1). These results demonstrate the efficacy of the ESRI test, showing great clinical potential which could lead to reductions in health costs, ineffective treatments, and inappropriate use of BL/BLI. IMPORTANCE TZP is a BL/BLI recommended for the empirical treatment of severe infections. The excessive use of TZP has promoted the emergence of TZP-resistant Escherichia coli isolates. We recently reported that TZP may contribute to the development of ESRI in E. coli isolates that are TZP susceptible but have low-level resistance to BL/BLI. This raises the need for the development of rapid detection systems. Here, we demonstrated that the ESRI test was able to detect the TZP-intermediate or -resistant isolates and the TZP-susceptible isolates with the capacity for ESRI development. All the isolates without BL/BLI resistance were negative for the ESRI test and did not harbor b-lactamase genes. For ESRI developers and TZP-intermediate or -resistant isolates, bla(TEM) was the most frequent beta-lactamase gene detected, follow by blaSHV and bla(OXA-1). The sensitivity, specificity, and positive and negative predictive values were all 100%. These data demonstrate the efficacy of the ESRI test and show that it has great clinical potential.

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