Related references
Note: Only part of the references are listed.Faecal microbiota and antimicrobial resistance gene profiles of healthy foals
Yuhong Liu et al.
EQUINE VETERINARY JOURNAL (2021)
Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution
Yoshiyuki Matsuo et al.
BMC MICROBIOLOGY (2021)
Effect of metaphylactic administration of tildipirosin on the incidence of pneumonia and otitis and on the upper respiratory tract and fecal microbiome of preweaning Holstein calves
Leonardo Bringhenti et al.
JOURNAL OF DAIRY SCIENCE (2021)
Chlortetracycline alters microbiota of gut or faeces in pigs and leads to accumulation and migration of antibiotic resistance genes
Xin Ma et al.
SCIENCE OF THE TOTAL ENVIRONMENT (2021)
Alteration of Gut Microbiota After Antibiotic Exposure in Finishing Swine
Hee Eun Jo et al.
FRONTIERS IN MICROBIOLOGY (2021)
Impact on the Gut Microbiota of Intensive and Prolonged Antimicrobial Therapy in Patients With Bone and Joint Infection
Benoit Levast et al.
FRONTIERS IN MEDICINE (2021)
16S rRNA Sequencing Analysis of the Gut Microbiota in Broiler Chickens Prophylactically Administered with Antimicrobial Agents
Matteo Cuccato et al.
ANTIBIOTICS-BASEL (2021)
Antibiotic Resistance: From Pig to Meat
Xavier C. Monger et al.
ANTIBIOTICS-BASEL (2021)
Effect of prophylactic use of tulathromycin on gut bacterial populations, inflammatory profile and diarrhea in newborn Holstein calves
Camila Cecilia Martin et al.
RESEARCH IN VETERINARY SCIENCE (2021)
Antibiotic Therapy and the Gut Microbiome: Investigating the Effect of Delivery Route on Gut Pathogens
Stephen A. Kelly et al.
ACS INFECTIOUS DISEASES (2021)
An inventory of 44 qPCR assays using hydrolysis probes operating with a unique amplification condition for the detection and quantification of antibiotic resistance genes
Tony Rochegue et al.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE (2021)
The occurrence of antibiotic resistance genes in the microbiota of yak, beef and dairy cattle characterized by a metagenomic approach
Weiwei Wang et al.
JOURNAL OF ANTIBIOTICS (2021)
Antimicrobial resistance in commensal Escherichia coli and Enterococcus spp. isolated from pigs subjected to different antimicrobial administration protocols
Caroline Pissetti et al.
RESEARCH IN VETERINARY SCIENCE (2021)
Selection of ESBL-producing Escherichia coli in the gut of calves experimentally fed with milk containing antibiotic residues
Veronique Dupouy et al.
VETERINARY MICROBIOLOGY (2021)
Alterations in the Fecal Microbiome and Metabolome of Horses with Antimicrobial-Associated Diarrhea Compared to Antibiotic-Treated and Non-Treated Healthy Case Controls
Carolyn Arnold et al.
ANIMALS (2021)
Comparison of the Therapeutic Effect of Treatment with Antibiotics or Nutraceuticals on Clinical Activity and the Fecal Microbiome of Dogs with Acute Diarrhea
Giulia Pignataro et al.
ANIMALS (2021)
Evolution of Pig Fecal Microbiota Composition and Diversity in Response to Enterotoxigenic Escherichia coli Infection and Colistin Treatment in Weaned Piglets
Mohamed Rhouma et al.
MICROORGANISMS (2021)
Feeding Pre-weaned Calves With Waste Milk Containing Antibiotic Residues Is Related to a Higher Incidence of Diarrhea and Alterations in the Fecal Microbiota
Martina Penati et al.
FRONTIERS IN VETERINARY SCIENCE (2021)
Current challenges and best-practice protocols for microbiome analysis
Richa Bharti et al.
BRIEFINGS IN BIOINFORMATICS (2021)
Host genotype and amoxicillin administration affect the incidence of diarrhoea and faecal microbiota of weaned piglets during a natural multiresistant ETEC infection
Francesca Romana Massacci et al.
JOURNAL OF ANIMAL BREEDING AND GENETICS (2020)
Impact of oral amoxicillin and amoxicillin/clavulanic acid treatment on bacterial diversity and β-lactam resistance in the canine faecal microbiota
Carmen Espinosa-Gongora et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2020)
Preventive antibiotic treatment of calves: emergence of dysbiosis causing propagation of obese state-associated and mobile multidrug resistance-carrying bacteria
Dorota A. Dobrzanska et al.
MICROBIAL BIOTECHNOLOGY (2020)
A Common Practice of Widespread Antimicrobial Use in Horse Production Promotes Multi-Drug Resistance
S. Alvarez-Narvaez et al.
SCIENTIFIC REPORTS (2020)
Linking perturbations to temporal changes in diversity, stability, and compositions of neonatal calf gut microbiota: prediction of diarrhea
Tao Ma et al.
ISME JOURNAL (2020)
The cecal and fecal microbiomes and metabolomes of horses before and after metronidazole administration
Carolyn E. Arnold et al.
PLOS ONE (2020)
Microbiota and metabolome responses in the cecum and serum of broiler chickens fed with plant essential oils or virginiamycin
Yan Chen et al.
SCIENTIFIC REPORTS (2020)
Effect of amoxicillin-clavulanic acid on clinical scores, intestinal microbiome, and amoxicillin-resistant Escherichia coli in dogs with uncomplicated acute diarrhea
Melanie Werner et al.
JOURNAL OF VETERINARY INTERNAL MEDICINE (2020)
Investigation of the Impacts of Antibiotic Exposure on the Diversity of the Gut Microbiota in Chicks
Abdelmotaleb A. Elokil et al.
ANIMALS (2020)
Toward Antibiotic Stewardship: Route of Antibiotic Administration Impacts the Microbiota and Resistance Gene Diversity in Swine Feces
Nicole Ricker et al.
FRONTIERS IN VETERINARY SCIENCE (2020)
Antibiotic Administration Routes and Oral Exposure to Antibiotic Resistant Bacteria as Key Drivers for Gut Microbiota Disruption and Resistome in Poultry
Yang Zhou et al.
FRONTIERS IN MICROBIOLOGY (2020)
Antibiotic affects the gut microbiota composition and expression of genes related to lipid metabolism and myofiber types in skeletal muscle of piglets
Honglin Yan et al.
BMC VETERINARY RESEARCH (2020)
The impact of therapeutic-dose induced intestinal enrofloxacin concentrations in healthy pigs on fecal Escherichia coli populations
Joren De Smet et al.
BMC VETERINARY RESEARCH (2020)
Study on the Diversity and Function of Gut Microbiota in Pigs Following Long-Term Antibiotic and Antibiotic-Free Breeding
Yao Li et al.
CURRENT MICROBIOLOGY (2020)
Effects of metronidazole on the fecal microbiome and metabolome in healthy dogs
Rachel Pilla et al.
JOURNAL OF VETERINARY INTERNAL MEDICINE (2020)
Effects of antimicrobial exposure on the antimicrobial resistance of Escherichia coli in the digestive flora of dairy calves
N. Jarrige et al.
PREVENTIVE VETERINARY MEDICINE (2020)
A metagenomic glimpse into the gut of wild and domestic animals: Quantification of antimicrobial resistance and more
Magdalena Skarzynska et al.
PLOS ONE (2020)
Temporal dynamics of the fecal microbiota in veal calves in a 6-month field trial
Meril Massot et al.
ANIMAL MICROBIOME (2020)
Antibiotic treatment triggers gut dysbiosis and modulates metabolism in a chicken model of gastro-intestinal infection
Caroline Ivanne Le Roy et al.
BMC VETERINARY RESEARCH (2019)
High Prevalence of Cefotaxime Resistant Bacteria in Grazing Beef Cattle: A Cross Sectional Study
Sarah Markland et al.
FRONTIERS IN MICROBIOLOGY (2019)
Negligible Impact of Perinatal Tulathromycin Metaphylaxis on the Developmental Dynamics of Fecal Microbiota and Their Accompanying Antimicrobial Resistome in Piglets
Mohamed M. Zeineldin et al.
FRONTIERS IN MICROBIOLOGY (2019)
In-feed bacitracin methylene disalicylate modulates the turkey microbiota and metabolome in a dose-dependent manner
Timothy A. Johnson et al.
SCIENTIFIC REPORTS (2019)
Antibiotic treatment in feedlot cattle: a longitudinal study of the effect of oxytetracycline and tulathromycin on the fecal and nasopharyngeal microbiota
Devin B. Holman et al.
MICROBIOME (2019)
Antibiotic resistomes of healthy pig faecal metagenomes
Aoife Joyce et al.
MICROBIAL GENOMICS (2019)
Differential Effects of Bacitracin Methylene Disalicylate (BMD) on the Distal Colon and Cecal Microbiota of Young Broiler Chickens
Alexandra Proctor et al.
FRONTIERS IN VETERINARY SCIENCE (2019)
Feeding Pasteurized Waste Milk to Preweaned Dairy Calves Changes Fecal and Upper Respiratory Tract Microbiota
Georgina Maynou et al.
FRONTIERS IN VETERINARY SCIENCE (2019)
Animal Breed Composition Is Associated With the Hindgut Microbiota Structure and β-Lactam Resistance in the Multibreed Angus-Brahman Herd
Peixin Fan et al.
FRONTIERS IN MICROBIOLOGY (2019)
Neonatal Exposure to Amoxicillin Alters Long-Term Immune Response Despite Transient Effects on Gut-Microbiota in Piglets
Janette M. Fouhse et al.
FRONTIERS IN IMMUNOLOGY (2019)
Long-term impact of tylosin on fecal microbiota and fecal bile acids of healthy dogs
Alison C. Manchester et al.
JOURNAL OF VETERINARY INTERNAL MEDICINE (2019)
The fecal resistome of dairy cattle is associated with diet during nursing
Jinxin Liu et al.
NATURE COMMUNICATIONS (2019)
Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
Jethro S. Johnson et al.
NATURE COMMUNICATIONS (2019)
Dose-dependent impact of oxytetracycline on the veal calf microbiome and resistome
Bart J. F. Keijser et al.
BMC GENOMICS (2019)
Prevalence, risk factors, and characterization of multidrug resistant and extended spectrum β-lactamase/AmpC β-lactamase producing Escherichia coli in healthy horses in France in 2015
Maud de Lagarde et al.
JOURNAL OF VETERINARY INTERNAL MEDICINE (2019)
Gardens for Gloriana Wealth, Splendour and Design in the Elizabethan Garden Introduction
Jane Whitaker
GARDENS FOR GLORIANA: WEALTH, SPLENDOUR AND DESIGN IN THE ELIZABETHAN GARDEN (2019)
Pharmacokinetics/Pharmacodynamics models of veterinary antimicrobial agents
Wanhe Luo et al.
JOURNAL OF VETERINARY SCIENCE (2019)
Effects of a synbiotic on the fecal microbiome and metabolomic profiles of healthy research cats administered clindamycin: a randomized, controlled trial
Jacqueline C. Whittemore et al.
GUT MICROBES (2019)
The dynamics of the antibiotic resistome in the feces of freshly weaned pigs following therapeutic administration of oxytetracycline
Mahdi Ghanbari et al.
SCIENTIFIC REPORTS (2019)
Influence of dietary avilamycin on ileal and cecal microbiota in broiler chickens
J. -H. Choi et al.
POULTRY SCIENCE (2018)
Distinct consequences of amoxicillin and ertapenem exposure in the porcine gut microbiome
Sheila Connelly et al.
ANAEROBE (2018)
Desulfovibrio desulfuricans bacteremia: A case report and literarure review
Hideharu Hagiya et al.
ANAEROBE (2018)
Impact of parenteral antimicrobial administration on the structure and diversity of the fecal microbiota of growing pigs
Mohamed Zeineldin et al.
MICROBIAL PATHOGENESIS (2018)
Increased productivity in poultry birds by sub-lethal dose of antibiotics is arbitrated by selective enrichment of gut microbiota, particularly short-chain fatty acid producers
Sohini Banerjee et al.
MICROBIOLOGY-SGM (2018)
Tannins and Bacitracin Differentially Modulate Gut Microbiota of Broiler Chickens
Juan Maria Diaz Carrasco et al.
BIOMED RESEARCH INTERNATIONAL (2018)
Comparative study of the impact of the administration of Amoxicillin and Algo-Bio® alternative substance to antibiotics, on the level of selection of resistant Enterobacteriaceae in the digestive flora of piglets
Innocent Kouame Kouadio et al.
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE (2018)
Similarity of the dog and human gut microbiomes in gene content and response to diet
Luis Pedro Coelho et al.
MICROBIOME (2018)
Impacts of feeding preweaned calves milk containing drug residues on the functional profile of the fecal microbiota
Richard Van Vleck Pereira et al.
SCIENTIFIC REPORTS (2018)
Effects of antibiotic on microflora in ileum and cecum for broilers by 16S rRNA sequence analysis
Yue She et al.
ANIMAL SCIENCE JOURNAL (2018)
Chlortetracycline enhances tonsil colonization and fecal shedding of multidrug-resistant Salmonella enterica serovar Typhimurium DT104 without major alterations to the porcine tonsillar and intestinal microbiota
D. B. Holman et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2018)
Impact of Low and High Doses of Marbofloxacin on the Selection of Resistant Enterobacteriaceae in the Commensal Gut Flora of Young Cattle: Discussion of Data from 2 Study Populations
Guillaume Lhermie et al.
FOODBORNE PATHOGENS AND DISEASE (2017)
Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
Benjamin J. Callahan et al.
ISME JOURNAL (2017)
The effects of amoxicillin treatment of newborn piglets on the prevalence of hernias and abscesses, growth and ampicillin resistance of intestinal coliform bacteria in weaned pigs
Jinhyeon Yun et al.
PLOS ONE (2017)
Antibiotics in 16-day-old broilers temporarily affect microbial and immune parameters in the gut
H. J. Wisselink et al.
POULTRY SCIENCE (2017)
Microbial Shifts in the Intestinal Microbiota of Salmonella Infected Chickens in Response to Enrofloxacin
Jun Li et al.
FRONTIERS IN MICROBIOLOGY (2017)
Effect of ceftiofur and enrofloxacin on E-coli sub-population in pig gastrointestinal tract
Dachuan Lin et al.
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE (2017)
Changes in the diversity and composition of gut microbiota of weaned piglets after oral administration of Lactobacillus or an antibiotic
Dongyan Zhang et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2016)
Insights into the biodiversity of the gut microbiota of broiler chickens
Leonardo Mancabelli et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Impact of two different colistin dosing strategies on healthy piglet fecal microbiota
M. A. Fleury et al.
RESEARCH IN VETERINARY SCIENCE (2016)
The Prehistory of Antibiotic Resistance
Julie Perry et al.
COLD SPRING HARBOR PERSPECTIVES IN MEDICINE (2016)
Colistin in Pig Production: Chemistry, Mechanism of Antibacterial Action, Microbial Resistance Emergence, and One Health Perspectives
Mohamed Rhouma et al.
FRONTIERS IN MICROBIOLOGY (2016)
A reference gene catalogue of the pig gut microbiome
Liang Xiao et al.
NATURE MICROBIOLOGY (2016)
Ingestion of Milk Containing Very Low Concentration of Antimicrobials: Longitudinal Effect on Fecal Microbiota Composition in Preweaned Calves
Richard Van Vleck Pereira et al.
PLOS ONE (2016)
Changes in the equine fecal microbiota associated with the use of systemic antimicrobial drugs
Marcio C. Costa et al.
BMC VETERINARY RESEARCH (2015)
Proteobacteria: microbial signature of dysbiosis in gut microbiota
Na-Ri Shin et al.
TRENDS IN BIOTECHNOLOGY (2015)
Effects of antibiotics (oxytetracycline, florfenicol or tulathromycin) on neonatal calves' faecal microbial diversity
J. Oultram et al.
VETERINARY RECORD (2015)
Gut Microbiota-Mediated Drug-Antibiotic Interactions
Dong-Hyun Kim
DRUG METABOLISM AND DISPOSITION (2015)
Processing faecal samples: a step forward for standards in microbial community analysis
Alba Santiago et al.
BMC MICROBIOLOGY (2014)
Identification of In Vitro Metabolites of Amoxicillin in Human Liver Microsomes by LC-ESI/MS
Malgorzata Szultka et al.
CHROMATOGRAPHIA (2014)
Bacterial phylogeny structures soil resistomes across habitats
Kevin J. Forsberg et al.
NATURE (2014)
Effect of Oral Administration of Metronidazole or Prednisolone on Fecal Microbiota in Dogs
Hirotaka Igarashi et al.
PLOS ONE (2014)
Bacterial diversity and antibiotic resistance in water habitats: searching the links with the human microbiome
Ivone Vaz-Moreira et al.
FEMS MICROBIOLOGY REVIEWS (2014)
Chicken faecal microbiota and disturbances induced by single or repeated therapy with tetracycline and streptomycin
Petra Videnska et al.
BMC VETERINARY RESEARCH (2013)
Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae
Agnese Lupo et al.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE (2013)
Alteration of digestive tract microbiome in neonatal Holstein bull calves by bacitracin methylene disalicylate treatment and scours
G. Xie et al.
JOURNAL OF ANIMAL SCIENCE (2013)
Fecal Microbial Diversity in Pre-Weaned Dairy Calves as Described by Pyrosequencing of Metagenomic 16S rDNA. Associations of Faecalibacterium Species with Health and Growth
Georgios Oikonomou et al.
PLOS ONE (2013)
Pediatric Fecal Microbiota Harbor Diverse and Novel Antibiotic Resistance Genes
Aimee M. Moore et al.
PLOS ONE (2013)
Influence of penicillin on microbial diversity of the cecal microbiota in broiler chickens
Pallavi Singh et al.
POULTRY SCIENCE (2013)
Diarrhea-associated pathogens, lactobacilli and cellulolytic bacteria in equine feces: Responses to antibiotic challenge
Brittany E. Harlow et al.
VETERINARY MICROBIOLOGY (2013)
Antimicrobial Resistance in the Food Chain: A Review
Claire Verraes et al.
INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH (2013)
Storage conditions of intestinal microbiota matter in metagenomic analysis
Silvia Cardona et al.
BMC MICROBIOLOGY (2012)
Experimental and analytical tools for studying the human microbiome
Justin Kuczynski et al.
NATURE REVIEWS GENETICS (2012)
Excretion of antibiotic resistance genes by dairy calves fed milk replacers with varying doses of antibiotics
Callie H. Thames et al.
FRONTIERS IN MICROBIOLOGY (2012)
The Human Gut Microbiome: Ecology and Recent Evolutionary Changes
Jens Walter et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 65 (2011)
Feed supplemented with 3 different antibiotics improved food intake and decreased the activation of the humoral immune response in healthy weaned pigs but had differing effects on intestinal microbiota
P. Bosi et al.
JOURNAL OF ANIMAL SCIENCE (2011)
Assessing Gut Microbial Diversity from Feces and Rectal Mucosa
Ana Durban et al.
MICROBIAL ECOLOGY (2011)
Modulations of the Chicken Cecal Microbiome and Metagenome in Response to Anticoccidial and Growth Promoter Treatment
Jessica L. Danzeisen et al.
PLOS ONE (2011)
Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation
Les Dethlefsen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Fecal microbiota of calves in the clinical setting: Effect of penicillin treatment
Anne-Mette R. Gronvold et al.
VETERINARY MICROBIOLOGY (2011)
Brain-gut-microbe communication in health and disease
Sue Grenham et al.
FRONTIERS IN PHYSIOLOGY (2011)
Changes in fecal microbiota of healthy dogs administered amoxicillin
Anne-Mette R. Gronvold et al.
FEMS MICROBIOLOGY ECOLOGY (2010)
A human gut microbial gene catalogue established by metagenomic sequencing
Junjie Qin et al.
NATURE (2010)
Fecal microbiota of horses in the clinical setting: Potential effects of penicillin and general anesthesia
Anne-Mette R. Gronvold et al.
VETERINARY MICROBIOLOGY (2010)
The effect of the macrolide antibiotic tylosin on microbial diversity in the canine small intestine as demonstrated by massive parallel 16S rRNA gene sequencing
Jan S. Suchodolski et al.
BMC MICROBIOLOGY (2009)
Recovery, purification, and cloning of high-molecular-weight DNA from soil microorganisms
Mark R. Liles et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Impact of three ampicillin dosage regimens on selection of ampicillin resistance in Enterobacteriaceae and excretion of blaTEM genes in swine feces
D. Bibbal et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Parenteral long-acting amoxicillin reduces intestinal bacterial community diversity in piglets even 5 weeks after the administration
Pawel Janczyk et al.
ISME JOURNAL (2007)
Metagenomic analysis of the human distal gut microbiome
Steven R. Gill et al.
SCIENCE (2006)
Characterization of intestinal microbiota and response to dietary virginiamycin supplementation in the broiler chicken
TJ Dumonceaux et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
High molecular weight DNA recovery from soils prerequisite for biotechnological metagenomic library construction
H Bertrand et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2005)
Diversity of the human intestinal microbial flora
PB Eckburg et al.
SCIENCE (2005)
Effects of cefotaxime and desacetylcefotaxime upon Clostridium difficile proliferation and toxin production in a triple-stage chemostat model of the human gut
J Freeman et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2003)
Experimental models of porcine post-weaning colibacillosis and their relationship to post-weaning diarrhoea and digestive disorders as encountered in the field
F Madec et al.
VETERINARY MICROBIOLOGY (2000)
Share Paper
