4.7 Article

An engineered protein-based submicromolar competitive inhibitor of the Staphylococcus aureus virulence factor aureolysin

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ELSEVIER
DOI: 10.1016/j.csbj.2022.01.001

Keywords

Bacterial infection; Metallopeptidase; Protein inhibitor; Protein design; Therapeutic protein; Crystal structure

Funding

  1. MCIN/AEI [PID2019-107725RG-I00]
  2. National Government of Catalonia [2017SGR3, 2018BP00163]
  3. Fundacio La Marato de TV3 [201815]
  4. Spanish State Agency for Research [BES2016-076877]
  5. European Social Fund ESF invests in your future
  6. German Federal Ministry for Education and Research (BMBF) [16GW0137K]

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The insect metallopeptidase inhibitor (IMPI) produced by Galleria mellonella has been found to inhibit the pathogenic bacterium Staphylococcus aureus, which may contribute to the development of novel protein drugs for treating Staphylococcus aureus infections.
Aureolysin, a secreted metallopeptidase (MP) from the thermolysin family, functions as a major virulence factor in Staphylococcus aureus. No specific aureolysin inhibitors have yet been described, making this an important target for the development of novel antimicrobial drugs in times of rampant antibiotic resistance. Although small-molecule inhibitors are currently more common in the clinic, therapeutic proteins and peptides (TPs) are favourable due to their high selectivity, which reduces off-target toxicity and allows dosage tuning. The greater wax moth Galleria mellonella produces a unique defensive protein known as the insect metallopeptidase inhibitor (IMPI), which selectively inhibits some thermolysins from pathogenic bacteria. We determined the ability of IMPI to inhibit aureolysin in vitro and used crystal structures to ascertain its mechanism of action. This revealed that IMPI uses the standard mechanism, which has been poorly characterised for MPs in general. Accordingly, we designed a cohort of 12 single and multiple point mutants, the best of which ((IF)-F-5-F-7) inhibited aureolysin with an estimated inhibition constant (K-i) of 346 nM. Given that animals lack thermolysins, our strategy may facilitate the development of safe TPs against staphylococcal infections, including strains resistant to conventional antibiotics. (C) 2022 The Author(s). Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology.

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