Related references
Note: Only part of the references are listed.The genetic and epigenetic landscape of the Arabidopsis centromeres
Matthew Naish et al.
SCIENCE (2021)
Comparative analysis of long noncoding RNAs in angiosperms and characterization of long noncoding RNAs in response to heat stress in Chinese cabbage
Xiaoming Song et al.
HORTICULTURE RESEARCH (2021)
Comprehensive analysis of SSRs and database construction using all complete gene-coding sequences in major horticultural and representative plants
Xiaoming Song et al.
HORTICULTURE RESEARCH (2021)
Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa
Xu Cai et al.
GENOME BIOLOGY (2021)
Integrative inference of transcriptional networks in Arabidopsis yields novel ROS signalling regulators
Inge De Clercq et al.
NATURE PLANTS (2021)
Pfam: The protein families database in 2021
Jaina Mistry et al.
NUCLEIC ACIDS RESEARCH (2021)
Physiological Functions of Heat Shock Proteins
Qiang Shan et al.
CURRENT PROTEIN & PEPTIDE SCIENCE (2020)
Growth and Hormone Alterations in Response to Heat Stress in Perennial Ryegrass Accessions Differing in Heat Tolerance
Manli Li et al.
JOURNAL OF PLANT GROWTH REGULATION (2020)
Genome-Wide Investigation of Heat Shock Transcription Factor Family in Wheat (Triticum aestivum L.) and Possible Roles in Anther Development
Jiali Ye et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)
SciPy 1.0: fundamental algorithms for scientific computing in Python
Pauli Virtanen et al.
NATURE METHODS (2020)
Preferential gene retention increases the robustness of cold regulation in Brassicaceae and other plants after polyploidization
Xiao-Ming Song et al.
HORTICULTURE RESEARCH (2020)
Genome-wide identification, transcriptome analysis and alternative splicing events of Hsf family genes in maize
Huaning Zhang et al.
SCIENTIFIC REPORTS (2020)
Sensitivity and Responses of Chloroplasts to Heat Stress in Plants
Shanshan Hu et al.
FRONTIERS IN PLANT SCIENCE (2020)
Coriander Genomics Database: a genomic, transcriptomic, and metabolic database for coriander
Xiaoming Song et al.
HORTICULTURE RESEARCH (2020)
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
Chengjie Chen et al.
MOLECULAR PLANT (2020)
Telomere-to-telomere assembly of a complete human X chromosome
Karen H. Miga et al.
NATURE (2020)
Genome-Wide Analysis of the Heat Shock Transcription Factor Gene Family inBrassica juncea: Structure, Evolution, and Expression Profiles
Mengyao Li et al.
DNA AND CELL BIOLOGY (2020)
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2019)
Next-Generation Sequencing and Emerging Technologies
Kishore R. Kumar et al.
SEMINARS IN THROMBOSIS AND HEMOSTASIS (2019)
Genome-wide identification and classification of the Hsf and sHsp gene families in Prunus mume, and transcriptional analysis under heat stress
Xueli Wan et al.
PEERJ (2019)
Genome-wide identification, phylogenetic and expression analysis of the heat shock transcription factor family in bread wheat (Triticum aestivum L.)
Min Zhou et al.
BMC GENOMICS (2019)
Differential expression of the Hsf family in cassava under biotic and abiotic stresses
Xin-Yi Yu et al.
GENOME (2019)
Genome-wide investigation of the heat shock transcription factor (Hsf) gene family in Tartary buckwheat (Fagopyrum tataricum)
Moyang Liu et al.
BMC GENOMICS (2019)
Heat Shock Proteins: Dynamic Biomolecules to Counter Plant Biotic and Abiotic Stresses
Saeed ul Haq et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)
Genome-wide analysis of the Hsf gene family in Brassica oleracea and a comparative analysis of the Hsf gene family in B. oleracea, B. rapa and B. napus
Neeta Lohani et al.
FUNCTIONAL & INTEGRATIVE GENOMICS (2019)
The Pfam protein families database in 2019
Sara El-Gebali et al.
NUCLEIC ACIDS RESEARCH (2019)
Regulation of heat shock transcription factors and their roles in physiology and disease
Rocio Gomez-Pastor et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2018)
Parallelization of MAFFT for large-scale multiple sequence alignments
Tsukasa Nakamura et al.
BIOINFORMATICS (2018)
Comprehensive analyses of the BES1 gene family in Brassica napus and examination of their evolutionary pattern in representative species
Xiaoming Song et al.
BMC GENOMICS (2018)
A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core
Lukas Zimmermann et al.
JOURNAL OF MOLECULAR BIOLOGY (2018)
The Third Revolution in Sequencing Technology
Erwin L. van Dijk et al.
TRENDS IN GENETICS (2018)
Abiotic Stresses: General Defenses of Land Plants and Chances for Engineering Multistress Tolerance
Mei He et al.
FRONTIERS IN PLANT SCIENCE (2018)
Genome-wide Identification and Classification of HSF Family in Grape, and Their Transcriptional Analysis under Heat Acclimation and Heat Stress
Liu Guotian et al.
HORTICULTURAL PLANT JOURNAL (2018)
PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants
Jinpu Jin et al.
NUCLEIC ACIDS RESEARCH (2017)
The heat-shock protein/chaperone network and multiple stress resistance
Pierre Jacob et al.
PLANT BIOTECHNOLOGY JOURNAL (2017)
Transcriptional Regulatory Network of Plant Heat Stress Response
Naohiko Ohama et al.
TRENDS IN PLANT SCIENCE (2017)
Systematic Analysis of Hsf Family Genes in the Brassica napus Genome Reveals Novel Responses to Heat, Drought and High CO2 Stresses
Xiaoyi Zhu et al.
FRONTIERS IN PLANT SCIENCE (2017)
Empirical evidence of fixed and homeostatic patterns of polyploid advantage in a keystone grass exposed to drought and heat stress
Robert C. Godfree et al.
ROYAL SOCIETY OPEN SCIENCE (2017)
The Transcriptional Cascade in the Heat Stress Response of Arabidopsis Is Strictly Regulated at the Level of Transcription Factor Expression
Naohiko Ohama et al.
PLANT CELL (2016)
Temperature expression patterns of genes and their coexpression with LncRNAs revealed by RNA-Seq in non-heading Chinese cabbage
Xiaoming Song et al.
BMC GENOMICS (2016)
Abiotic Stress Signaling and Responses in Plants
Jian-Kang Zhu
CELL (2016)
The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection
Jinghua Yang et al.
NATURE GENETICS (2016)
Genome wide analysis of heat shock transcription factor (HSF) family in chickpea and its comparison with Arabidopsis
Syed Adeel Zafar et al.
Plant Omics (2016)
Effects of elevated mean and extremely high temperatures on the physio-ecological characteristics of geographically distinctive populations of Cunninghamia lanceolata
Ting Zhou et al.
SCIENTIFIC REPORTS (2016)
Genome-Wide Investigation of Hsf Genes in Sesame Reveals Their Segmental Duplication Expansion and Their Active Role in Drought Stress Response
Komivi Dossa et al.
FRONTIERS IN PLANT SCIENCE (2016)
Origination, Expansion, Evolutionary Trajectory, and Expression Bias of AP2/ERF Superfamily in Brassica napus
Xiaoming Song et al.
FRONTIERS IN PLANT SCIENCE (2016)
The Plant Heat Stress Transcription Factors (HSFs): Structure, Regulation, and Function in Response to Abiotic Stresses
Meng Guo et al.
FRONTIERS IN PLANT SCIENCE (2016)
Heat shock factors in tomatoes: genome-wide identification, phylogenetic analysis and expression profiling under development and heat stress
Xuedong Yang et al.
PEERJ (2016)
Genome-wide analysis, expression profile of heat shock factor gene family (CaHsfs) and characterisation of CaHsfA2 in pepper (Capsicum annuum L.)
Meng Guo et al.
BMC PLANT BIOLOGY (2015)
Genome-wide identification, classification, and analysis of heat shock transcription factor family in Chinese cabbage (Brassica rapa pekinensis)
X. Y. Huang et al.
GENETICS AND MOLECULAR RESEARCH (2015)
TaHsfA6f is a transcriptional activator that regulates a suite of heat stress protection genes in wheat (Triticum aestivum L.) including previously unknown Hsf targets
Gang-Ping Xue et al.
JOURNAL OF EXPERIMENTAL BOTANY (2015)
Temperature extremes: Effect on plant growth and development
Jerry L. Hatfield et al.
WEATHER AND CLIMATE EXTREMES (2015)
Genome-wide analysis of the Hsf family in soybean and functional identification of GmHsf-34 involvement in drought and heat stresses
Pan-Song Li et al.
BMC GENOMICS (2014)
Genome-wide analysis of the GRAS gene family in Chinese cabbage (Brassica rapa ssp pekinensis)
Xiao-Ming Song et al.
GENOMICS (2014)
The heat shock factor family from Triticum aestivum in response to heat and other major abiotic stresses and their role in regulation of heat shock protein genes
Gang-Ping Xue et al.
JOURNAL OF EXPERIMENTAL BOTANY (2014)
Photosynthesis: Response to high temperature stress
Sonal Mathur et al.
JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY (2014)
Genome-wide identification, classification and expression analysis of the heat shock transcription factor family in Chinese cabbage
Xiaoming Song et al.
MOLECULAR GENETICS AND GENOMICS (2014)
ForceAtlas2, a Continuous Graph Layout Algorithm for Handy Network Visualization Designed for the Gephi Software
Mathieu Jacomy et al.
PLOS ONE (2014)
Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa
Chaobo Tong et al.
BMC GENOMICS (2013)
Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions
Jaina Mistry et al.
NUCLEIC ACIDS RESEARCH (2013)
Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa
Feng Cheng et al.
PLANT CELL (2013)
Plant tolerance to high temperature in a changing environment: scientific fundamentals and production of heat stress-tolerant crops
Craita E. Bita et al.
FRONTIERS IN PLANT SCIENCE (2013)
The plant heat stress transcription factor (Hsf) family: Structure, function and evolution
Klaus-Dieter Scharf et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2012)
HSPIR: a manually annotated heat shock protein information resource
Ratheesh R. Kumar et al.
BIOINFORMATICS (2012)
Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees
Maureen Stolzer et al.
BIOINFORMATICS (2012)
SMART 7: recent updates to the protein domain annotation resource
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2012)
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
Yupeng Wang et al.
NUCLEIC ACIDS RESEARCH (2012)
BRAD, the genetics and genomics database for Brassica plants
Feng Cheng et al.
BMC PLANT BIOLOGY (2011)
Effects of abiotic stress on plants: a systems biology perspective
Grant R. Cramer et al.
BMC PLANT BIOLOGY (2011)
D3: Data-Driven Documents
Michael Bostock et al.
IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS (2011)
The genome of the mesopolyploid crop species Brassica rapa
Xiaowu Wang et al.
NATURE GENETICS (2011)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
Morgan N. Price et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
CDD: specific functional annotation with the Conserved Domain Database
Aron Marchler-Bauer et al.
NUCLEIC ACIDS RESEARCH (2009)
MEME SUITE: tools for motif discovery and searching
Timothy L. Bailey et al.
NUCLEIC ACIDS RESEARCH (2009)
Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis
Jingkang Guo et al.
JOURNAL OF GENETICS AND GENOMICS (2008)
STRESS RESPONSE SUPPRESSOR1 and STRESS RESPONSE SUPPRESSOR2, two DEAD-box RNA helicases that attenuate Arabidopsis responses to multiple abiotic stresses
Pragya Kant et al.
PLANT PHYSIOLOGY (2007)
An Electronic Fluorescent Pictograph Browser for Exploring and Analyzing Large-Scale Biological Data Sets
Debbie Winter et al.
PLOS ONE (2007)
Heat stress- and heat shock transcription factor-dependent expression and activity of ascorbate peroxidase in Arabidopsis
II Panchuk et al.
PLANT PHYSIOLOGY (2002)
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
M Lescot et al.
NUCLEIC ACIDS RESEARCH (2002)