Related references
Note: Only part of the references are listed.Natural hybridization between two butterfly bushes in Tibet: dominance of F1 hybrids promotes strong reproductive isolation
Rongli Liao et al.
BMC PLANT BIOLOGY (2021)
An updated phylogenetic and biogeographic analysis based on genome skimming data reveals convergent evolution of shrubby habit in Clematis in the Pliocene and Pleistocene
Jian He et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2021)
Disentangling Sources of Gene Tree Discordance in Phylogenomic Data Sets: Testing Ancient Hybridizations in Amaranthaceae s.l.
Diego F. Morales-Briones et al.
SYSTEMATIC BIOLOGY (2021)
Molecular and morphological evidence for hybrid origin and matroclinal inheritance of an endangered wild rose, Rosa x pseudobanksiae (Rosaceae) from China
Cheng Zhang et al.
CONSERVATION GENETICS (2020)
Genetic structure and admixture in sheep from terminal breeds in the United States
K. M. Davenport et al.
ANIMAL GENETICS (2020)
Phylogenetic relationships and chloroplast capture in the Amelanchier-Malacomeles-Peraphyllum clade (Maleae, Rosaceae): Evidence from chloroplast genome and nuclear ribosomal DNA data using genome skimming
Bin-Bin Liu et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2020)
Prediction of the Suitable Area of the Chinese White Pines (Pinus subsect. Strobus) under Climate Changes and Implications for Their Conservation
Lele Lin et al.
FORESTS (2020)
Prickly waterlily and rigid hornwort genomes shed light on early angiosperm evolution
Yongzhi Yang et al.
NATURE PLANTS (2020)
Phylogenomics recovers monophyly and early Tertiary diversification of Dipteronia (Sapindaceae)
Yu Feng et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2019)
Impacts of Inference Method and Data set Filtering on Phylogenomic Resolution in a Rapid Radiation of Ground Squirrels (Xerinae: Marmotini)
Bryan S. Mclean et al.
SYSTEMATIC BIOLOGY (2019)
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes
Xiao-Jian Qu et al.
PLANT METHODS (2019)
An invariants-based method for efficient identification of hybrid species from large-scale genomic data
Laura S. Kubatko et al.
BMC EVOLUTIONARY BIOLOGY (2019)
Phylogenomics Reveals an Ancient Hybrid Origin of the Persian Walnut
Bo-Wen Zhang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2019)
Hybridization preceded radiation in diploid wheats
Stella Huynh et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2019)
Structural variation of the complete chloroplast genome and plastid phylogenomics of the genus Asteropyrum (Ranunculaceae)
Jian He et al.
SCIENTIFIC REPORTS (2019)
Molecular evidence for natural hybridization between Ligularia nelumbifolia and Cremanthodium stenoglossum (Asteraceae, Senecioneae)
Huai Ning et al.
BOTANY (2019)
RNAseq-based phylogenetic reconstruction of Taxaceae and Cephalotaxaceae
Aasim Majeed et al.
CLADISTICS (2019)
Evolution of Portulacineae Marked by Gene Tree Conflict and Gene Family Expansion Associated with Adaptation to Harsh Environments
Ning Wang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2019)
Origin of angiosperms and the puzzle of the Jurassic gap
Hong-Tao Li et al.
NATURE PLANTS (2019)
Phylogenomic analyses reveal extensive gene flow within the magic flowers (Achimenes)
Wade R. Roberts et al.
AMERICAN JOURNAL OF BOTANY (2018)
Efficiency of different strategies to mitigate ascertainment bias when using SNP panels in diversity studies
Dorcus Kholofelo Malomane et al.
BMC GENOMICS (2018)
TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees
Uyen Mai et al.
BMC GENOMICS (2018)
A2-type cyclin is required for the asymmetric entry division in rice stomatal development
Xiaoxiao Qu et al.
JOURNAL OF EXPERIMENTAL BOTANY (2018)
HyDe: A Python Package for Genome-Scale Hybridization Detection
Paul D. Blischak et al.
SYSTEMATIC BIOLOGY (2018)
Inferring Phylogenetic Networks Using PhyloNet
Dingqiao Wen et al.
SYSTEMATIC BIOLOGY (2018)
Formation of disjunct plant distributions in Northeast Asia: a case study of Betula davurica using a species distribution model
Takuto Shitara et al.
PLANT ECOLOGY (2018)
Comparative Analysis of Complete Chloroplast Genomes of Anemoclema, Anemone, Pulsatilla, and Hepatica Revealing Structural Variations Among Genera in Tribe Anemoneae (Ranunculaceae)
Huijie Liu et al.
FRONTIERS IN PLANT SCIENCE (2018)
Independent homoploid hybrid speciation events in the Macaronesian endemic genus Argyranthemum
Oliver W. White et al.
MOLECULAR ECOLOGY (2018)
Evaluation of shared genetic susceptibility loci between autoimmune diseases and schizophrenia based on genome-wide association studies
Louise K. Hoeffding et al.
NORDIC JOURNAL OF PSYCHIATRY (2017)
Hybridization in Plants: Old Ideas, New Techniques
Benjamin E. Goulet et al.
PLANT PHYSIOLOGY (2017)
Is homoploid hybrid speciation that rare? An empiricist's view
G. Nieto Feliner et al.
HEREDITY (2017)
Resolution of deep eudicot phylogeny and their temporal diversification using nuclear genes from transcriptomic and genomic datasets
Liping Zeng et al.
NEW PHYTOLOGIST (2017)
Phylogenetic reassessment of tribe Anemoneae (Ranunculaceae): Non-monophyly of Anemone s.l. revealed by plastid datasets
Nan Jiang et al.
PLOS ONE (2017)
Molecular Evidence for Natural Hybridization between Cotoneaster dielsianus and C-glaucophyllus
Mingwan Li et al.
FRONTIERS IN PLANT SCIENCE (2017)
Potential effects of climate change on geographic distribution of the Tertiary relict tree species Davidia involucrata in China
Cindy Q. Tang et al.
SCIENTIFIC REPORTS (2017)
ecospat: an R package to support spatial analyses and modeling of species niches and distributions
Valeria Di Cola et al.
ECOGRAPHY (2017)
Sensitive phylogenetics of Clematis and its position in Ranunculaceae
Samuli Lehtonen et al.
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2016)
Taxonomic status of Clematis acerifolia var. elobata, based on molecular evidence
Shuang-Xi Yan et al.
PHYTOTAXA (2016)
A maximum pseudo-likelihood approach for phylogenetic networks
Yun Yu et al.
BMC GENOMICS (2015)
How just a few makes a lot: Speciation via reticulation and apomixis on example of European brambles (Rubus subgen. Rubus, Rosaceae)
Michal Sochor et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2015)
A genetic mechanism for female-limited Batesian mimicry in Papilio butterfly
Hideki Nishikawa et al.
NATURE GENETICS (2015)
The geography of hybrid speciation in plants
Joachim W. Kadereit
TAXON (2015)
Palynology, cytology, and molecular systematics of Anemone section Begoniifolia (Ranunculaceae)
Yu Zhang et al.
PLANT SYSTEMATICS AND EVOLUTION (2015)
THE ROLE OF HOMOPLOID HYBRIDIZATION IN EVOLUTION: A CENTURY OF STUDIES SYNTHESIZING GENETICS AND ECOLOGY
Sarah B. Yakimowski et al.
AMERICAN JOURNAL OF BOTANY (2014)
Phylogenetic pinpointing of a paleopolyploidy event within the flax genus (Linum) using transcriptomics
Saemundur Sveinsson et al.
ANNALS OF BOTANY (2014)
ASTRAL: genome-scale coalescent-based species tree estimation
S. Mirarab et al.
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Diploid hybrid origin of Ostryopsis intermedia (Betulaceae) in the Qinghai-Tibet Plateau triggered by Quaternary climate change
Bingbing Liu et al.
MOLECULAR ECOLOGY (2014)
Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times
Liping Zeng et al.
NATURE COMMUNICATIONS (2014)
glUV: a global UV-B radiation data set for macroecological studies
Michael Beckmann et al.
METHODS IN ECOLOGY AND EVOLUTION (2014)
Chromosome numbers of 28 taxa in 10 genera of the Ranunculaceae (buttercup family) from the Korean peninsula
Kyong-Sook Chung et al.
CARYOLOGIA (2013)
Collinearity: a review of methods to deal with it and a simulation study evaluating their performance
Carsten F. Dormann et al.
ECOGRAPHY (2013)
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
Brian J. Haas et al.
NATURE PROTOCOLS (2013)
OrganellarGenomeDRAW-a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets
Marc Lohse et al.
NUCLEIC ACIDS RESEARCH (2013)
CD-HIT: accelerated for clustering the next-generation sequencing data
Limin Fu et al.
BIOINFORMATICS (2012)
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
Matthew Kearse et al.
BIOINFORMATICS (2012)
Ancient Admixture in Human History
Nick Patterson et al.
GENETICS (2012)
Measuring ecological niche overlap from occurrence and spatial environmental data
Olivier Broennimann et al.
GLOBAL ECOLOGY AND BIOGEOGRAPHY (2012)
Variation of pollen morphology, and its implications in the phylogeny of Clematis (Ranunculaceae)
Lei Xie et al.
PLANT SYSTEMATICS AND EVOLUTION (2012)
Transcriptional Analysis of Arabidopsis thaliana Response to Lima Bean Volatiles
Sufang Zhang et al.
PLOS ONE (2012)
Proteinortho: Detection of (Co-)orthologs in large-scale analysis
Marcus Lechner et al.
BMC BIOINFORMATICS (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
Phylogenetic Analyses of Clematis (Ranunculaceae) based on Sequences of Nuclear Ribosomal ITS and Three Plastid Regions
Lei Xie et al.
SYSTEMATIC BOTANY (2011)
Asymmetric hybridization in Rhododendron agastum: a hybrid taxon comprising mainly F(1)s in Yunnan, China
Hong-Guang Zha et al.
ANNALS OF BOTANY (2010)
ENMTools: a toolbox for comparative studies of environmental niche models
Dan L. Warren et al.
ECOGRAPHY (2010)
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
Michael J. Moore et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
The frequency of polyploid speciation in vascular plants
Troy E. Wood et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Detecting hybrid speciation in the presence of incomplete lineage sorting using gene tree incongruence: A model
Chen Meng et al.
THEORETICAL POPULATION BIOLOGY (2009)
Phyutility: a phyloinformatics tool for trees, alignments and molecular data
Stephen A. Smith et al.
BIOINFORMATICS (2008)
ENVIRONMENTAL NICHE EQUIVALENCY VERSUS CONSERVATISM: QUANTITATIVE APPROACHES TO NICHE EVOLUTION
Dan L. Warren et al.
EVOLUTION (2008)
A revision of Clematis sect. Tubulosae (Ranunculaceae)
Wang Wen-Tsai et al.
ACTA PHYTOTAXONOMICA SINICA (2007)
Estimation of nuclear DNA content in plants using flow cytometry
Jaroslav Dolezel et al.
NATURE PROTOCOLS (2007)
Notes on the genus Clematis (Ranunculaceae) (VI)
WT Wang
ACTA PHYTOTAXONOMICA SINICA (2006)
Application of phylogenetic networks in evolutionary studies
DH Huson et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Very high resolution interpolated climate surfaces for global land areas
RJ Hijmans et al.
INTERNATIONAL JOURNAL OF CLIMATOLOGY (2005)
Notes on the publication date of four names of Lauraceae from China
Y Yang et al.
ACTA PHYTOTAXONOMICA SINICA (2005)
The advantages and disadvantages of being polyploid
L Comai
NATURE REVIEWS GENETICS (2005)
Predicting species distribution: offering more than simple habitat models
A Guisan et al.
ECOLOGY LETTERS (2005)
MAFFT version 5: improvement in accuracy of multiple sequence alignment
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2005)
Correcting for ascertainment biases when analyzing SNP data: applications to the estimation of linkage disequilibrium
R Nielsen et al.
THEORETICAL POPULATION BIOLOGY (2003)
Phylogenetic analysis under reticulate evolution
SZ Xu
MOLECULAR BIOLOGY AND EVOLUTION (2000)